Basic Information

Insect: Bombylius major
Gene Symbol: -
Assembly: GCA_932526615.1
Location: CAKOBF010000295.1:527400-530947[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00029 0.017 15.7 3.4 1 23 196 218 196 218 0.98

2 11 0.0032 0.19 12.4 9.6 1 23 224 246 224 246 0.95

3 11 0.00011 0.0066 17.0 6.4 1 23 252 274 252 274 0.98

4 11 0.0012 0.068 13.8 1.6 1 23 280 302 280 302 0.95

5 11 3.1e-05 0.0019 18.8 0.5 1 23 308 330 308 330 0.97

6 11 3e-06 0.00018 22.0 0.1 1 23 336 358 336 358 0.98

7 11 0.00012 0.0068 17.0 1.8 1 23 363 385 363 385 0.97

8 11 0.00012 0.0073 16.9 0.0 1 23 391 414 391 414 0.97

9 11 0.00042 0.025 15.2 0.1 1 23 495 517 495 517 0.97

10 11 0.038 2.3 9.1 3.2 1 23 607 629 607 629 0.95

11 11 0.0081 0.48 11.2 5.2 5 23 642 660 634 660 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00029	0.017	15.7	3.4	1	23	196	218	196	218	0.98
2	11	0.0032	0.19	12.4	9.6	1	23	224	246	224	246	0.95
3	11	0.00011	0.0066	17.0	6.4	1	23	252	274	252	274	0.98
4	11	0.0012	0.068	13.8	1.6	1	23	280	302	280	302	0.95
5	11	3.1e-05	0.0019	18.8	0.5	1	23	308	330	308	330	0.97
6	11	3e-06	0.00018	22.0	0.1	1	23	336	358	336	358	0.98
7	11	0.00012	0.0068	17.0	1.8	1	23	363	385	363	385	0.97
8	11	0.00012	0.0073	16.9	0.0	1	23	391	414	391	414	0.97
9	11	0.00042	0.025	15.2	0.1	1	23	495	517	495	517	0.97
10	11	0.038	2.3	9.1	3.2	1	23	607	629	607	629	0.95
11	11	0.0081	0.48	11.2	5.2	5	23	642	660	634	660	0.92

Sequence Information

Coding Sequence: ATGCCATACTTGCAGTTAACTGATGGTATAACGGTTCAAAAGGATGTCAAGGGTACAATAACTCATACAAATAAAGGTGGTGTTGTACGTAGAATGTTTGTGGTAAATGAACCATTCTCATCTGGAGCAACACAAAGAGTTATAACAACCGGTACAACTGCTGTTACCCATAAAAAACAGGATGTATTGAGCATTCAATGTGACAAAAATTCAAATGGCATTCTCGATACAAAAACTCAAACAATTTTAACAACAACGGCCGGTGGCAAAACACATTTTAGTCCAATCGGTCCATTACATTTAACTGCTGAAGAATGTAATGAAATTTTAATGAAACGTGCTATTGCAGCATCAGCACAAAATCAACAGCATGCAACTATTACAACAGCTGATGGACAGCATACAGGTATATCAGTTCAAGTACAGAAAGTTATACAAGGATTAGAAGACACTGAAGATTCACAGGCAACATCATCCACACATTGTAAATTGGAACCTGTCTTGGAAATTTCACCAAAAACTGAAATCCAAGATGTTTATGAAAATGAACAACCACAAAACACAACAGTTGTTAAAGAACGGCCATATTCTTGTGATGAATGCGGAAAATCATTTTTATTAAAACATCACTTAACTACACATGCTAGAGTTCATACAGGTGAAAGACCCCATATTTGTGTACATTGTGGTAAAAGTTTTGCTCATAAACACTGTCTAAATACACATTTATTATTACATTCAACGGATCGTCCATATCAAtgcagtgaatgtaaaaaaagttttacattaaaacatcatttattaacgcattcacgtgttcatagtcgtgaacgaccatttatttgtcaagaatgcggccgagcatttccattgaaacgacatttggtaacacatagtaaatttcatgctggtgaacggccgtatgtttgtgaagaatgtggagaaagttttgctcaagaaaatcatttgaTAATGCATTCAAGATTCCATGGATCACTTAATCCGTTTGTATGTCCAGATTGTGGAGCAACATTTCCTCGTAAATTTCAATTGGTTAATCATGGACGTATCCATGGAAAAGTTCCACATTCATGTACCGTATGTGGAAAAGAATTTTTACAAAAGCGTACATTAGTTTCACATATGAGAATTCACACTGGTGATCAACCCTATCCTTGCACTGGCTGTGGTGATGGTTTTCAAACTAAAGCTGAATTAAATCAACATATCCGTATTGTTCATGGTGGTATtaatccaaattcagcaaatacaacaattgttgcaacaaatgcgattgtaacttcacaacagcagcaacaacaacaacagcatcaacaacaaACTACCCAAATTCAAattcaacaacctcagcaacagaatcaacaacaacagcaacaacaaactgtaacggttgtcagtaatcaaaataatgctttagtgacaaccattgcgGGTAATGATAATTCAGCACCAAGACCTCAATATGCATGTCGTGAATGTGGAAGTGCGTTTAATAGCAGAGAAGCCTTAGCCTTACATTTGAGACTTCATACTGGTGATAAGAGTTTAATGACCGATTTATGCGCTTTAACTGCAGCTTTACCAGGACATTTTTTGAATACCACAAATTTAAATCAAAGTAATCAAACGGTTGTGTCACCAAATGCAGTTCCAGTTCAAATAATATCGTCGACTGGTCAAGTCGTAAGCCAAGGAATGGTTCAAAACCCATCACAACAACAAAGTGTTGTTACAAGTGTTCAAACAACACCACCAGCAGCAACAACAGTCCAACATCATGTTCCAAAACCAAAAACCCATTTTTGTGCTAGCTGTGGCAAAGGATTCGCTGCTAAACATGGCTTATTTCAACATAATCGAAGACATCCAAACGGTGGCTGTACACTTCGAACGCATGTTTGTGAATGCGGTAAAGCATTTTTCCAAAAGAATCATTTAATGTTACATCAAAGGCAGCATTTGGAAACTAAACCAAATATAACACAACAACAACAACAACAAGCACAACAGgacatgaatcaaacacagcagcaacaagcgcaacaacaacaacagcagcagcagcagcaacagcaacaaaatcaacaattagctgcagctcaacaacaacaagcccaatcacaaactcagggtcaacaacagcaacacacaatgacaaccagagaagttctaatcggtaatcaacctgtgcatgtccaagttcttcaaggttcaaatacagcacaggtaattaaatacgaaattaatatacctcaggagggtcagaccatagagtga
Protein Sequence: MPYLQLTDGITVQKDVKGTITHTNKGGVVRRMFVVNEPFSSGATQRVITTGTTAVTHKKQDVLSIQCDKNSNGILDTKTQTILTTTAGGKTHFSPIGPLHLTAEECNEILMKRAIAASAQNQQHATITTADGQHTGISVQVQKVIQGLEDTEDSQATSSTHCKLEPVLEISPKTEIQDVYENEQPQNTTVVKERPYSCDECGKSFLLKHHLTTHARVHTGERPHICVHCGKSFAHKHCLNTHLLLHSTDRPYQCSECKKSFTLKHHLLTHSRVHSRERPFICQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCPDCGATFPRKFQLVNHGRIHGKVPHSCTVCGKEFLQKRTLVSHMRIHTGDQPYPCTGCGDGFQTKAELNQHIRIVHGGINPNSANTTIVATNAIVTSQQQQQQQQHQQQTTQIQIQQPQQQNQQQQQQQTVTVVSNQNNALVTTIAGNDNSAPRPQYACRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLNTTNLNQSNQTVVSPNAVPVQIISSTGQVVSQGMVQNPSQQQSVVTSVQTTPPAATTVQHHVPKPKTHFCASCGKGFAAKHGLFQHNRRHPNGGCTLRTHVCECGKAFFQKNHLMLHQRQHLETKPNITQQQQQQAQQDMNQTQQQQAQQQQQQQQQQQQQNQQLAAAQQQQAQSQTQGQQQQHTMTTREVLIGNQPVHVQVLQGSNTAQVIKYEINIPQEGQTIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01049868;
90% Identity: -
80% Identity: -