Basic Information

Insect: Bombylius major
Gene Symbol: -
Assembly: GCA_932526615.1
Location: CAKOBF010001250.1:309295-311696[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 7.8e-06 0.00046 20.7 1.9 2 23 255 276 254 276 0.96

2 12 4.8e-06 0.00028 21.4 2.2 1 23 282 304 282 304 0.99

3 12 7.2e-06 0.00043 20.8 0.2 1 23 310 332 310 332 0.98

4 12 0.0022 0.13 13.0 0.3 1 23 338 361 338 361 0.92

5 12 0.014 0.82 10.5 4.4 1 23 369 391 369 391 0.98

6 12 9.4e-07 5.6e-05 23.6 1.0 2 23 400 421 399 421 0.97

7 12 3.4e-05 0.002 18.7 1.7 1 23 428 450 428 450 0.99

8 12 0.0098 0.58 10.9 4.1 1 23 463 485 463 485 0.98

9 12 1.4e-05 0.00085 19.8 0.5 1 23 493 515 493 515 0.98

10 12 0.061 3.6 8.4 3.4 1 23 520 543 520 543 0.94

11 12 0.039 2.3 9.0 0.1 2 23 552 574 551 574 0.95

12 12 0.00074 0.044 14.5 0.3 2 23 580 601 580 601 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	7.8e-06	0.00046	20.7	1.9	2	23	255	276	254	276	0.96
2	12	4.8e-06	0.00028	21.4	2.2	1	23	282	304	282	304	0.99
3	12	7.2e-06	0.00043	20.8	0.2	1	23	310	332	310	332	0.98
4	12	0.0022	0.13	13.0	0.3	1	23	338	361	338	361	0.92
5	12	0.014	0.82	10.5	4.4	1	23	369	391	369	391	0.98
6	12	9.4e-07	5.6e-05	23.6	1.0	2	23	400	421	399	421	0.97
7	12	3.4e-05	0.002	18.7	1.7	1	23	428	450	428	450	0.99
8	12	0.0098	0.58	10.9	4.1	1	23	463	485	463	485	0.98
9	12	1.4e-05	0.00085	19.8	0.5	1	23	493	515	493	515	0.98
10	12	0.061	3.6	8.4	3.4	1	23	520	543	520	543	0.94
11	12	0.039	2.3	9.0	0.1	2	23	552	574	551	574	0.95
12	12	0.00074	0.044	14.5	0.3	2	23	580	601	580	601	0.96

Sequence Information

Coding Sequence: ATGTTTTTAAAATTTAATTCAACAGTGTGTCGTGTTTGCTTGGAACAAGAAGGAAAATTTTCATTATTTGATAACTTTGAAATTGCTGAAGAATTTCGTTTTTGTACACTTTTAGAGGCATCTGAAAATGATGAATTACCACCAAAACTATGTACAAAATGTTTTAAATGTTTAAAAGTTGCTAATAATTTTAAAACAAAAGCAATATCATCAGATACATATTTACGTAAATTTTTATCATCATTAAATTCAAAATTTGGAAATGTTGTTGCTAATAATCGTAATATATTAAATGTTGATTTGACTGAATTAAATTCATTATTATCAACAGATGATCAGATATATTATGAGAATATTGAACATCAACAATCAACAAGAAGAACAACAGCAGCAACAACACAAAATATTAAACAGGTATCAACATCAACAACAGGAAAATCAAAAAAACCAGAATATAAAATCGAAATAATACAACTTCAAGATAATGAAGATGATAATGTTGAAATGGTTGATTATGAAGATATTAATACATACAAAGATACTGAAGATGATGATATAAATAATGAAAGAAATAATGAAATTGAAAAATATGATACTGAAATAATAAGTGAAATTATTGAAGAAGATTCTTGTACAAATGATCATGAAATAACTGATTGTGAAATAACAAGAAAATCATTATCTACTGAAGATGTGATTAATCAAAAAAAGAAATATGATTCAAAAATATCTGATGAACCTTATAAATCAAATAATTCATGcatttgtgttaaatgtaataaaatattttcatcaaaagcaaatttaatgcgacatgttttaacacataataattcaaaaccatatcaatgtacagtttgtggtgattgttttacacaaaatggttcattaaaaagtcatatgttacgacatactggtgaacgtccatattcttgtgatgtttgtggtaaatcttttgcacgtttacgtgtattaaaaattcatgaaaggattcatactggagataaaccatatgaatgtagtcaatgtggtgataaatttcgagttaaagaaggattaaagCGTCATAATGCAGTACAACATTCAATTGGTTTATTAAAAGAATATTATTGTCAAATATGTAAACGTAAATTAAGTTCAAAATGTTCACTTGATACACATTTAAAATTACATCGTGGTGAAAAGAAATCAAATACATCATGTAATATATGTAATAAAATATTTTCATCAAAATATTCATTACAAAATCATTTACAAATACATAAAAAATCTAAAAAAAAATATCAATGTAAACAATGTGATGAAGAATTTCAAACAAGATCATTATATTCAATTCATATGCAAAAACATAGTGGTGATAATATGAATTCAGAATCAAAAATTAAATTTATATGTGAAATATGTCATAAAATTATACATCGTAAATTTCAATTATATCAACATTTATTAACACATGAAAATAAAGATGATTTAAATTATCAATGTAAAATATGTAATGAAAAATTTACAGTCAAGGAAAATATTTTACAACATATACGAGCACATAATAATTTTATACATAAATGTAATGAATGTAATATTGGTTTTCATATAAAACGTGATTTAAAATTACATCGTGCTAATTATCATAAAGAAACTGTTGAAGATTTAAATAAATGTGAAGAATGTGATATAATGTTTGTAAGTGGTATCGATTATAATATTCATTTTTTAACAAAACATGATGAAATTAATAATGAATGTAAAGAATGTGGAGAATTATTTAAATCAAATAGATTATATAAAGAACATATATTAGAACATGATGTAATAAATTGTAAAAAATAA
Protein Sequence: MFLKFNSTVCRVCLEQEGKFSLFDNFEIAEEFRFCTLLEASENDELPPKLCTKCFKCLKVANNFKTKAISSDTYLRKFLSSLNSKFGNVVANNRNILNVDLTELNSLLSTDDQIYYENIEHQQSTRRTTAATTQNIKQVSTSTTGKSKKPEYKIEIIQLQDNEDDNVEMVDYEDINTYKDTEDDDINNERNNEIEKYDTEIISEIIEEDSCTNDHEITDCEITRKSLSTEDVINQKKKYDSKISDEPYKSNNSCICVKCNKIFSSKANLMRHVLTHNNSKPYQCTVCGDCFTQNGSLKSHMLRHTGERPYSCDVCGKSFARLRVLKIHERIHTGDKPYECSQCGDKFRVKEGLKRHNAVQHSIGLLKEYYCQICKRKLSSKCSLDTHLKLHRGEKKSNTSCNICNKIFSSKYSLQNHLQIHKKSKKKYQCKQCDEEFQTRSLYSIHMQKHSGDNMNSESKIKFICEICHKIIHRKFQLYQHLLTHENKDDLNYQCKICNEKFTVKENILQHIRAHNNFIHKCNECNIGFHIKRDLKLHRANYHKETVEDLNKCEECDIMFVSGIDYNIHFLTKHDEINNECKECGELFKSNRLYKEHILEHDVINCKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00234200;
90% Identity: -
80% Identity: -