Basic Information

Insect: Bombylius major
Gene Symbol: -
Assembly: GCA_932526615.1
Location: CAKOBF010000230.1:756293-759780[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0014 0.085 13.5 0.7 1 23 356 379 356 379 0.94

2 12 0.00018 0.011 16.4 1.5 1 23 387 409 387 409 0.97

3 12 1.4e-06 8.3e-05 23.0 1.1 1 23 416 438 416 438 0.98

4 12 5.9e-06 0.00035 21.0 1.0 1 23 444 466 444 466 0.99

5 12 4.8e-06 0.00029 21.3 1.2 1 23 473 495 473 495 0.99

6 12 0.00011 0.0068 17.0 0.3 1 23 501 523 501 523 0.96

7 12 4.6e-05 0.0027 18.2 0.5 1 23 529 551 529 551 0.98

8 12 2.2e-06 0.00013 22.4 1.2 1 23 557 580 557 580 0.96

9 12 1.3e-05 0.00076 20.0 1.2 1 23 586 609 586 609 0.97

10 12 9.1e-05 0.0054 17.3 2.5 1 23 615 637 615 637 0.99

11 12 5.4e-05 0.0032 18.0 0.6 1 23 643 665 643 665 0.96

12 12 0.0054 0.32 11.7 0.1 1 22 671 692 671 695 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0014	0.085	13.5	0.7	1	23	356	379	356	379	0.94
2	12	0.00018	0.011	16.4	1.5	1	23	387	409	387	409	0.97
3	12	1.4e-06	8.3e-05	23.0	1.1	1	23	416	438	416	438	0.98
4	12	5.9e-06	0.00035	21.0	1.0	1	23	444	466	444	466	0.99
5	12	4.8e-06	0.00029	21.3	1.2	1	23	473	495	473	495	0.99
6	12	0.00011	0.0068	17.0	0.3	1	23	501	523	501	523	0.96
7	12	4.6e-05	0.0027	18.2	0.5	1	23	529	551	529	551	0.98
8	12	2.2e-06	0.00013	22.4	1.2	1	23	557	580	557	580	0.96
9	12	1.3e-05	0.00076	20.0	1.2	1	23	586	609	586	609	0.97
10	12	9.1e-05	0.0054	17.3	2.5	1	23	615	637	615	637	0.99
11	12	5.4e-05	0.0032	18.0	0.6	1	23	643	665	643	665	0.96
12	12	0.0054	0.32	11.7	0.1	1	22	671	692	671	695	0.91

Sequence Information

Coding Sequence: ATGACAGCTTTAATAGAAGAAAGTAAACAAGCAAAATGTTTTTTATGCAATAAATTTATTAAGGAAGAAGTTCTGTTACTTTTTGAAAAACGTATTGGTGAAAATGGCATTGAAAACTCTCCATTGTCTGAAATTCTGTCATCAATTCTTGCTAGAAATATTGATAAAAATAATTCACATTCAGAATTTATATGCCAACCGTGCACACAAATTCTTCAAGAATTCGAATTAATCGAACAACATTACATTCAATTAAAATGTAAAATTATACGTAACTTTAATGAAGTAGCCAAGGAAAATAATATTCCAGAAGTAGAATTGGATAATATTATGGTAGAAGAGGATGATAGTGAAAGAATTATTGAATTTAATACTTCTACAACATATCTTGAATCACAAATTTCCGAAAGTGAAGATGAAGAACATAAAAATCATTACCAAGATAATAATGATATTGAAAAAGATTCATTTGATGTTGAAGAAATTGAAACGAAAGACATTTCAAGAACAAATTTAGATGATTTCAATGAAATTGTTACAGTTCCCGTAATATCTGAGGAAGACTATGATAGTCAGAATGAAGATCAATCCGAACAAATTTTTGTACATGATGAAGATCATATAATTGAAATATTGCCAAATGAAGATGTTCATTATGAACACATTGTCGAGCAAAATTCAGATACCAATGATATAATTTCGAATGAAACGGATTATAGTAACTTGGAAAATACATCAGACGTAAGCGATGAAAAAGATTCTAATTTGATTAAAATAGAAAATATAAATTTAATAAATAATACTTCAACATCACCACAATTTAATACTAATAAAAGACATAGAATAAATAAAATGGAAAAAATATTACCATCTTCTCAATCAGTTTATGTAATGAATGGAGAAAAAGTAGTGTGTTTAATTTGTAATCCAAATTATTGCCAAGATAATTGTATAGATAATATTATAACTTCAGAATCTTCAGAATCAGATGAACAAAAATCTATAATTGAATTTGATTTTCGTACAATTAGTATTCATTTAAAAAGCATTCATAATATTCGAGTATATATTTGTGATATATGTGGTAAAGAATTTCATAAAAGAAATGAAATGAATGATCATGTTGATAAAGAGCATGGTGGAACTAAAGATGGTAAATATAGTTGTGAAATATGTAATAGAATATTTACAAATTTACGATTATTTCGTGTACATAAAAAATTACATTATAATTTAATaaaacaatattcatgtaaacaatgtgataaaaaatatatatcaaaaagtttacttgaagaacatatgaatatgcatactggagaaagaccatataaatgtagctattgtgcaaaagattttgcatcaaaatatacattaacagctcatttaaaaattcatcaaaatcgtccaagaccatatgtatgttcaatatgttcaaaagcttttttcaattcacaaaatttacaacaacatgaaaaaacacattctggtattaaagaatttatttgtgaaatatgtgaaaaagcatttggtacacaacataatttagatgttcataaaattgtacatactggttataaaccatatatttgtcgtacgtgtggtaaagcttttgcaagacgaactgaaattaaagatcatgaacgtacacatactggtgaaaaaccattttcatgtaatatttgtaatatgtcatttgcacaacgttcaaatttaacaacacataagcgtgcaacacatttaaatgataaacgtttcaaatgcgatcaatgtgatcggtcgtttaaaagacgacgtctacttgattatcatattcgtgcagctcatactggagaacgcccttataaatgtaatgtatgtgcatcatcatttgtatatccagaacatttcaaaaagcatcaacgtattcatagtggagaaaaaccatatgcatgtgaagtttgtggaaaaaaattcaatagtagagataatcgaaatgcacatcgttttgtacatagcgacaaaaaaccatatgaatgtttaagttgtggtcaaggatttatgcgtAAACCATTGTTATATAGCCACATGCAACAAGCAGGTCATTTAAATGATACCATAGTAGTGAATCAGCCTCGACTATCTAAAGACGGTGAATTAGTTAAAATAGATGAAGATGATTTAATTGAGCAAGATAATCAAGAAACAATTGAAGAACATTTCATCATCAATACTGACGTTCAAGGAGGGATCACAAGTGATAATGAAGATGTTATTCCAACTCAAATACTAGCTGCTGAACATTCAAATATTGCAGAAGTTATAACACCTGATCAAGTTTTGATTGATGCTAATGAATCAATAATTGAATCAGAAAATTGTCTTATGCATATTGTATTGCCCGAATAA
Protein Sequence: MTALIEESKQAKCFLCNKFIKEEVLLLFEKRIGENGIENSPLSEILSSILARNIDKNNSHSEFICQPCTQILQEFELIEQHYIQLKCKIIRNFNEVAKENNIPEVELDNIMVEEDDSERIIEFNTSTTYLESQISESEDEEHKNHYQDNNDIEKDSFDVEEIETKDISRTNLDDFNEIVTVPVISEEDYDSQNEDQSEQIFVHDEDHIIEILPNEDVHYEHIVEQNSDTNDIISNETDYSNLENTSDVSDEKDSNLIKIENINLINNTSTSPQFNTNKRHRINKMEKILPSSQSVYVMNGEKVVCLICNPNYCQDNCIDNIITSESSESDEQKSIIEFDFRTISIHLKSIHNIRVYICDICGKEFHKRNEMNDHVDKEHGGTKDGKYSCEICNRIFTNLRLFRVHKKLHYNLIKQYSCKQCDKKYISKSLLEEHMNMHTGERPYKCSYCAKDFASKYTLTAHLKIHQNRPRPYVCSICSKAFFNSQNLQQHEKTHSGIKEFICEICEKAFGTQHNLDVHKIVHTGYKPYICRTCGKAFARRTEIKDHERTHTGEKPFSCNICNMSFAQRSNLTTHKRATHLNDKRFKCDQCDRSFKRRRLLDYHIRAAHTGERPYKCNVCASSFVYPEHFKKHQRIHSGEKPYACEVCGKKFNSRDNRNAHRFVHSDKKPYECLSCGQGFMRKPLLYSHMQQAGHLNDTIVVNQPRLSKDGELVKIDEDDLIEQDNQETIEEHFIINTDVQGGITSDNEDVIPTQILAAEHSNIAEVITPDQVLIDANESIIESENCLMHIVLPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00234189;
90% Identity: iTF_00234189;
80% Identity: -