Bmaj013719.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- Hr39
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000316.1:859398-862118[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.38 1.9e+03 -1.9 0.2 137 161 65 89 30 141 0.65 2 5 0.22 1.1e+03 -1.1 1.2 55 83 255 283 149 377 0.63 3 5 6.6e-09 3.4e-05 23.6 0.0 1 32 446 479 446 492 0.82 4 5 0.00057 2.9 7.4 0.1 72 138 495 561 470 571 0.60 5 5 2.9e-77 1.5e-73 248.8 3.5 164 408 516 771 506 771 0.88
Sequence Information
- Coding Sequence
- ATGTCCATTAATACTGGTGGGGATATATCATCCCCTAATATAGCAGTTGCAACAACAATAACAACAACTAATCAAAATATACCGCCCATATTATCTATAACTGGTAATAACCCACCGAATTTACAACAACAATTACGAAACAATATATCAGTTACAAATATAAAATGTGAAGATATTGTTCGACcgccatcagcaccaatttcaacaacaaatggcatttcatcatcatcgatatcatcatcatcatcattatcaacaacaagcaataataatattaataataataatAATAATTTTTTTAATGGAGGAATACGAATTTCCGTACCAAAAGTTGAAGATTCAGATGAATCTGAATCAGAATTATCAAATATAGAAAATACAAAAGTAAATCGTAGACCTGTAAGTTCAAGTAAAAATGGACCACGTCCCATGTCATGGGAAGGAGAACTTTCTGAGACTGAAGATCTTATGGATACAGAAAATTCAGTTAGTAATGATAAACAATTTGATGATACACAAATGTCAACAACAACAAAAGATGATACACGACACTGTGATATCATTAGTGGAAAATCATCAGATTTTGATCAAATTTCTATTGAAGCAGGTTCTGTGATATATTCATCTGGATTAAAAAAATTCCAAACAGATTTGGTTAATTTAAAATATGAACCAGGGTTATCGGATGCAACAGCAAGTGGCCTTAATTCACCATTGTTGGCGAGATCAAAAACTAATTTGCTTCCTGCAAATCCAAGCCCAGATTCAGCAATTCATTCCGTTTATACACATAGTTCACCAAGTCAATCACCTTTAACATCACGTCATGCACCATACACTCCATCACTAAGTCGAAATAATAGTGATGCATCTCATAGTAGTTGTTATTCATACAGTTCTGAATTTAGTCCAACACATTCACCTATACAGGGAAGACATAATATTTATGGTAATTTTAATGGATCTCTTCATCATTCCGTTCTATATCGACCAATAATTGATGGTGCTGTAGAAACTACAACTCAATCATTAGGCTCTCCAGCACAAAGACGACCAGATGAAATACTACCAGAAACCGAAGCAATTCCATCACCCGGAATATCACGGCAACAATTAATAAATAGTCCATGTCCAATTTGTGGTGATAAAATCTCTGGCTTCCATTATGGTATATTTTCCTGTGAATCATGTAAAGGTTTCTTCAAACGGACTGTTCAAAATCGAAAGAATTATGTTTGTGTACGTGGCGGGCCATGTCCTGTAACAATATCAACTCGTAAGAAATGTCCAGCATGCCGTTTTGAAAAATGCCTACAAAAAGGGATGAAATTAGAAGCGATTCGTGAAGATCGAACTCGAGGTGGTCGATCAACGTATCAATGCTCATATACACTTCCAAGTTCAATATTAAATCCACTTATTAGTCCAGATACACCATCGACAAGTGCACAAATGAATCAACGAACAGTAAATGGATACCCAATAAAAATAGAACAATCTGATATTTGCAATGGAAGTAGCAGTAACAGCAGTACAGGACAGAGCAGTCATCGTAACCATATTCCACCATTGTTGCAGGAAATCATGGATGTTGAACATTTATGGCAATACAATGAAGAAGAGCTTTCGAGACTGAATCATCCACCAGCTAGATCAAATACAAGTGATCTAACGACAAATCCTCTTCTTGCCAGTGCTGGTCTTTCTTCGAATGGAGAGAACACTAATCCAGATTTGATAGCCAATCTATGTAGTGTTGCTGATCATAGATTGTATAAAATTGTAAAATGGTGTAAAAGTTTACCACTTTTTAAACATATTTCGATCGATGATCAAATTTGTCTTCTTATAAATTCTTGGTGTGAATTGCTATTATTTTCCTGTTGCTTCCGATCCGTTGATACTCCTGGTGAAATAAAAATTTCTTTAGGTAAATCTATAACGCTTGCACAAGCAAAGTCTAGTGGTTTGCAGGCCTGCGTTGAAAGAATGCTTAACCTTGCCGAACACTTGAGACGATTACGTGTTGACCGATATGAATATGTTGCCATGAAAGTTATTGTTCTCTTACAATCCGATACATCGGAGTTACGAGAACCAGTTAAAGTTAGAGAAAGTCAAGAGAAAGCATTACAAGCATTGCAAGCTTATACATTAGCTCATTATCCAGAATCACCAGCAAAATTTGGAGAATTACTATTAAGAATTCCAGAATTGCAAAGAACATGCCAGCTTGGTAAAGAAATGTTAACAATCAAATCAAAGGACGGTGAAGATTTTAATCTGTTAATGGAACTTTTACGTGGAGAACATTGA
- Protein Sequence
- MSINTGGDISSPNIAVATTITTTNQNIPPILSITGNNPPNLQQQLRNNISVTNIKCEDIVRPPSAPISTTNGISSSSISSSSSLSTTSNNNINNNNNNFFNGGIRISVPKVEDSDESESELSNIENTKVNRRPVSSSKNGPRPMSWEGELSETEDLMDTENSVSNDKQFDDTQMSTTTKDDTRHCDIISGKSSDFDQISIEAGSVIYSSGLKKFQTDLVNLKYEPGLSDATASGLNSPLLARSKTNLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNIYGNFNGSLHHSVLYRPIIDGAVETTTQSLGSPAQRRPDEILPETEAIPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPSSILNPLISPDTPSTSAQMNQRTVNGYPIKIEQSDICNGSSSNSSTGQSSHRNHIPPLLQEIMDVEHLWQYNEEELSRLNHPPARSNTSDLTTNPLLASAGLSSNGENTNPDLIANLCSVADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCFRSVDTPGEIKISLGKSITLAQAKSSGLQACVERMLNLAEHLRRLRVDRYEYVAMKVIVLLQSDTSELREPVKVRESQEKALQALQAYTLAHYPESPAKFGELLLRIPELQRTCQLGKEMLTIKSKDGEDFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00234046;
- 90% Identity
- iTF_00234046;
- 80% Identity
- iTF_00234992;