Basic Information

Gene Symbol
Arid4b
Assembly
GCA_932526615.1
Location
CAKOBF010000219.1:1195138-1202372[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-29 6.4e-26 90.8 0.0 1 89 291 377 291 377 0.96

Sequence Information

Coding Sequence
ATGACGCAGCAAGTGGACGATCCCCCATCATTACCAGTTGGTACGGAGGTAAGCGCTAAGTACAAGGGGGCATTTTGTGAAGCAAAAGTTCGTAAGGTTGTACGTAATATTAAAGTAAAAGTTGCATATAAACAAGGATTAGGATCTGGTATTGTATCTGATGATGCTATTAAATCTGGTTGTTTATTACGTGTTGGTGCTACAGTTGAAGTTAAACATCCTGATAAACGTGAATATATTGAGGCAACGATAACAAAAATTCAAGATTGTTCACAATATACTGTTGTATTTGATGACGGGGATATAACAACATTACGTCGTACAGCATTATGTTTAAAAAGTGGTCGACATTTTAATGAAAGTGAAACATTAGATCAGTTACCATTAACACATCCAGAACATTTTGGTAATCCAGTAATTGGCGGTCGAAGAGGCAGACGTTCACGTCATCTTCAAGATGATAGCTCCGATGATGAAGTTGAAAATAATTCAAAAAAAGTTGTGACAGAAAAAGAAGAAAATGTTGGAAAAATTGTTTGTGTTGAATCAACGGAAACAAAGAAAAAAGATAAAGAGAAATGGTTTCCTGGTTTAGTTGTATCACCGACAGCTCAAGTAACGGTTCGTATACGGGTTAAAGATGAATATTTGGTACGTTCATTTAAAGATGGTCGATATTATACAGTTCCAAAAAAAGAAGCTACTGAATTTACACGTGAATTAACAGCCAAACAAGATGGTCCAGCAATTCAAGCAGCTCTTGAATTTCTTGATAATGGAGTTCTTCCACCACATTGGGATCGTGATGCTTTATTTGGTTTGAACTTAAGTGATTATGATTCAGATAGTTCAAATGATGAACAACGTGAAGAAAAAGACCATTTTGTTGCACAATTATATAAATTCATGGATGATCGTGGTACACCATTAAATAAAGTACCGTCCATAACAAATCGTGATGTTGATTTATATAGATTATATCGTGCTGTACAAAAATTAGGAGGTTACAATCGTGTTACAAGTCAAAATCAATGGAAATCTATAACAATTCGTTTAGGGTTCACACCACCTACAGTCAGTGTTACAAATTTAGTTAAACAAGCATATAAAAAATTTTTACAACCTTTTGAGGGATTTGATCGTAAATTAGGTTGCTCCATGTCAATGACACCTAGAAATTCAAATCGTAGTAAAGGTCGTAGTCTGGTTAGAGCAAATTCTGTTgcatcaccaaaaccagaagttaaagagaaactagaacaacagaaatcagcttctgtagtgacagcatcagttacagctacaacatcaaatcaacagcaacagcagcagcagcaagttgctgaagaatCAGAAAACACAAGTGAATCAAGTAATATGGAAGTGTCTAATAAGTCATCAAAACGGAAACTATCAACTGGAAGTAATAAAGTAAAAACTTTGGTTGATAAATTTGAAGAGAAAAATAAAGATGAATCAGAACATCCGTTAACAGCGATATCAAAATCAATAAAACAATCAACAACAATAAAGGATGATACAACAAATCAAGTACAAACCACACCAACATCAAGCAGTCGAAGGGGAGAAAAAAGTGTTGGTAGAAAAAGTGGAACAACCCCAGTAACAGAAGAGAAACGTGGACGAAAGAAAAAAGAAGTTCCACTTATTTTTGAATCAGAAAAACAACATCAAGAAAGATCTGCAGAACCAATACAAGTTACAGATTTTCCTGTTGAAGTCGGTGATAAATTGAAAGTGTATTATCATGAGAAAAAAGTTACATATGAAGCTAAAGTTATCGATTTATCAATTCAACAAGGTACTCCATTGTATTTGGTACATTATACAGGATGGAATACACGTTACGATGAATGGGTACCAAAAGAGAGGATTGCTGAGAATATTTCAAATAATAAGACAAAACGTACAAAAGGCTCTGGTGCAGGAAATCCAAAATTAAGCACAATGACAAATGAAATGTCTGCAAAATCCGCTGCAAACAACGACAGAATATTTGGTATAATAAAAACTGGAGCGAAACGAGGAAGAGGAAGAAGCGATTCTCATCCATCTCGATCTTCTACTCCTAGCATTAGTACAACCACTACTCGAACAAAATCACCAGCAGCTGCTACGAATATAATGCAACGACGAACTACACGTGGTCAACAACCAAGTGCTGCTGCCGCAGTAACAGCAGCTGCCATTTCTCGACGAACCTCGAATAATATCTCTGACATATCGTCATCTATGCAAACTGATTCGGATAGCGATTCAGATGATGCACCCGTTAAAAAGCCAACGAAATCAACAACTTCATCCAACGCTTCTGGCGCTTCATCAGTTTCAACTCAAGCTACAGCTGGTTCTGTTAAAGCACCGACACCTGATGACACAAAATCAGTATCATCCCTCGCGGCTAATAGTCCAAGCGAAACTGAGGAGGACGAAGCTTCTCTTGATGTTAGTGGCACCGGCACAAACGGTGCTAGTGCAAAAGGAAGAGATTATGATCTCAATCAAATTCGTTCTGAATTAAAAGGCCTCACCGAACTAAAATCGCCTTCACCAGAAGGTGATGCAGTTTCTTCACAATTAACCACATCTTCTGATAAAACTCAATCATCAGTTTTTAGTTTTGGTGGTAGTTCGACAATCGCTGAAGATAGTGTTGAGTCAACTAAACAAATAATACCTACAAATAATATTGTGTCTACAACAACAGCACCTACAACAACAACTACAACAAAAGTAACGACATCATCTCCTCCAATAAATCCAGTAATTGCCGATTTAAAAGCATTATCATCAACAGATTTGTCTTCTGAAACCGATTCATTTGCGGATGATGATTCTCAGTCATCTGATAAAACAACAACATTGGAAAATATGACTGAAAAATTACAACAAAAAATTAAAGCTGAAAAATTGGCACAGGCTAAATGTCTTGAACGATTAAATGCAAGTGGCCCTGTTAGTAGCCTTAGTGGTGTTACTGTGAAAACGGCAATAGAAAAAATTGCACCATTAAAATCAGCTGGAATAGAGAAAATCATTAAAGAATCACTTGCTGAAAAAATGCAAGAGACATTAAAAGCAGCAAACACCGCAGCAGCTGCTGCAGCTGCGGCATCAAAACCTTTTTTGATTGAGAAAAGTATCTATAAACCGCTCATTACATCATCATCTGTGATATCGAACGTTGATAAAGATGAAAAACCGAAACCATCACAAATCCTTGAAATAAAAACTCCATCAAAACAACAACAGCAACTGCAAAATACATTCTTAAGTAAATCTTCACCAATTACAACACCAGAGAAAAAAATTATTGCACCTTTGGTTGAAACGAAAACACCATCATCGCTATCATCGATACGTGGTGGTTTAGAAGGGCGTAAAATTACTCAGATGCTTGATAAGTCAAATACAACACCGCAAATAACAATAAAAGCAGTACAACAGAAAGACAGTACCTCAGATATCACCATTACCTCCACATCTCAACATTTTCATCATAATCAACCAATGATACAGCAGTCATCTTCTACATCATCGTCTATTCTATCCGAGAAGAGTCTTAAAGATATTTCAAAATCAACATCATCTACATCATCAATAACATCTTCTGCATTGATAAAACAGTcaacttccactgctgctgctgccgcagctgctgctacagatgtatatgaATTTAAAGAACCAGAACCGTTTGAGTTTGAAGGTCGAAAGCCAACATCAGTGATAATTCATTCAAATTTAGATGTATCTGAAAGTAAAAAGAAGAAAACTGCAGCACAAAAGATTGAAGTTATGCAAGAGACAAAAACAACAGCAACACTTCCAATGACAACACCACCAACGGTCCCAACAACAAATCGAAGAAATAAGAAATCACCCCTAAAAGATCAGCATCATCATCAACAGCAATCATTATCAGATATTAGATCGGCTAAGCAAGTAAAAATTGAAGAAAAATCTCttctggatccagagataactcaaacaacaactgccttgataacaacgaccgtatcgataacaacaacaatgacaccacctgtaacgacaaccagttctgttagcagcTCTGGAGGATTACTTTCTATAACAAAACCAGAAAATCCTTTTGATGCTTTGCGTAAATCACCAAGTTTCAATTTGAATATAAATGCACTGAATGAAGAACTAGCGACAACTGTACAAGAAACAGCaaaagctttacctgatttaccagcaacagaacgtcaaattcctgttactttagcaacaccttcatcatcatcattatcagcagcagtatcatcatcgtcatcatcaatattaacaccaacaccagccttagtaacaccGCAAaaattaatgccatcattTATAAGTCCTTTCGTTGAAAGTAAAACTTATACAACAGATGCACCACATATTTTTGAAATGAAAAGTGATGATGAAAGTACAAAAAGTGGTAGTGATCAAAGTAGTGATAATAAATCATCAAAAAAGAAAACAGAATTTGAAACAGTTAAAAAAATTTTGTTATCTTCAGATTCTTCAGCATTTGATGATTTAGAACCACCAAAAATTGAGAAACCATCAATTGCTGATAAAGTTTTAAAAGCACTTAATCAACAGAAACAAGAAGAAAAAAATATAATTAAAGAAAcatcatcacaatcatcgtcttcattatcagtatcatcatcacaaccatcaacattaataaagtctgaaccatcttcgtcagcaacacgtttatcagaaaaattaacaacaATTTCAGAAATGGCACAAATTTCATTTTCAATTTCGGAACCACCTAAAATTGAATTACCAGCTGTAATTAAAAAAGAAATTGAAATTCATTTAAAAAAACCTATATTAAGTAGTCCTGAACATAAATTAGATATTTTAGAATCAATAGCACCAAAAAATAATGATTTAAGTGAAACAATACAAAAATTAGAAAGTGTTATACAAAAAACATCAAATGTTGATCATTTTGATGATGATTCATCAGATAGTACAGATTCTGAAAGACGTTTAGTTATTGAAGATGATTCTCAAGATTCAGATAATAATCAAATATCACCGCAACATCAACAATCATCTCAACAACAACAACAACAAATTGTAGAAATAAAAAATAATAACATTTCATCAATGGCTAGTATTTCTCATTCTTCTGGAACACTTACACAATCAATAACAACTCCAATAACAATAACACAAGTTACACAAGCAATCAATAACACTAAAAAAGAACCATTATTAAAAGATGAAGATAAGGATTTTAAACCAATTACTATTAcaccaataacagcaacaataaataaacaagaatcatcaataaagccaacaacaatatttaaaaccgaagatattttatcatcatcatcatcatcatcatcatcatcattattatcaacaaaatgtaacatttcaaatttctcaacatctaaatttcatcatcaatcaagcatttttaatatgaaaccatcatcaattatattttctgactcatcaattctatcagattctggtataaaaccaattattgaatttagtaatacatcatcacCATTAAAAATTGAATCAGGTTTATTAAATCAAAAACCAAAACATGAAATGAGTATTATTCAACAACAACAACAACATAATCAATCAATTATGTCATCAGAGAACAATATTATAACAATTCCATCACACAGTACAATAACAACAAATTCCACAAATTTTACAAGTACAAATTTAATTGGTGTTACAATACAAATTCCTCCACCTCTTCCATCATCATTAAAAGATGAACAAATTTCAAATACAGAAAATTTAAATATTCATAGTGAATCAATAAATTTATTATTATGTGAAGAAACAATTCCTGGTAGTCCAACACCGATTCGTGATACAGCAATCATTGATATTAAACCGAATATACATCCAATTGAATCTGATATAAAACCAGTACCAATGGATATTGAATGTGATACAATACCAGTTGGAAATATAGCAAATGTAAGAATTATAAATAcgtcatcatcgccaacaacatcaatgggaattgcatcaggagtaacaaccacaacatcatcatcatcaatgaaaacttcaattaaatgtgaaagtagtggtggtattggtggtgtaggtggtggtggtggtggtagtgttgttggtggtacgacagttaatactactggtactggcactggtgAAAATCAAACACCTAATAGTTCACCACGTGATTCAGTTAGTCAAGATGATAGTGGTGAAGATCTTAAAAAACATATCGAACAAGATATTGTGGATTCAACGAAAAAAAGACGACGTACACGTAAACATTCTGAATGTGAATTAATATCATATTCAGTATCAAAAAGAAGAAGAACGGCAGCAGCTGCTGCATTAGCTAATGTAACAAATATGACGACAACAGCAAGTAAAAGAAATGGTTCAGACAGTGAAGATAACTCAGATATAATTATACAAAGAGTCAGACCCACAAGACCGTGCCAATATAATTTCCTTGTGCAATTAGATCCAGCAATGAATCCCAATCAAAGGATATCAATTTTACGCAAAAAAATTCAAGAATTACGAAAAACCTACAATATGATTAAAGCTGAATTAGCAAGTATTGATCGTCGAAGGAAAAAATTACGAAGAAAAAAAAATCAACAAAAATTATTAACATCAAGTTAA
Protein Sequence
MTQQVDDPPSLPVGTEVSAKYKGAFCEAKVRKVVRNIKVKVAYKQGLGSGIVSDDAIKSGCLLRVGATVEVKHPDKREYIEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVIGGRRGRRSRHLQDDSSDDEVENNSKKVVTEKEENVGKIVCVESTETKKKDKEKWFPGLVVSPTAQVTVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTRELTAKQDGPAIQAALEFLDNGVLPPHWDRDALFGLNLSDYDSDSSNDEQREEKDHFVAQLYKFMDDRGTPLNKVPSITNRDVDLYRLYRAVQKLGGYNRVTSQNQWKSITIRLGFTPPTVSVTNLVKQAYKKFLQPFEGFDRKLGCSMSMTPRNSNRSKGRSLVRANSVASPKPEVKEKLEQQKSASVVTASVTATTSNQQQQQQQQVAEESENTSESSNMEVSNKSSKRKLSTGSNKVKTLVDKFEEKNKDESEHPLTAISKSIKQSTTIKDDTTNQVQTTPTSSSRRGEKSVGRKSGTTPVTEEKRGRKKKEVPLIFESEKQHQERSAEPIQVTDFPVEVGDKLKVYYHEKKVTYEAKVIDLSIQQGTPLYLVHYTGWNTRYDEWVPKERIAENISNNKTKRTKGSGAGNPKLSTMTNEMSAKSAANNDRIFGIIKTGAKRGRGRSDSHPSRSSTPSISTTTTRTKSPAAATNIMQRRTTRGQQPSAAAAVTAAAISRRTSNNISDISSSMQTDSDSDSDDAPVKKPTKSTTSSNASGASSVSTQATAGSVKAPTPDDTKSVSSLAANSPSETEEDEASLDVSGTGTNGASAKGRDYDLNQIRSELKGLTELKSPSPEGDAVSSQLTTSSDKTQSSVFSFGGSSTIAEDSVESTKQIIPTNNIVSTTTAPTTTTTTKVTTSSPPINPVIADLKALSSTDLSSETDSFADDDSQSSDKTTTLENMTEKLQQKIKAEKLAQAKCLERLNASGPVSSLSGVTVKTAIEKIAPLKSAGIEKIIKESLAEKMQETLKAANTAAAAAAAASKPFLIEKSIYKPLITSSSVISNVDKDEKPKPSQILEIKTPSKQQQQLQNTFLSKSSPITTPEKKIIAPLVETKTPSSLSSIRGGLEGRKITQMLDKSNTTPQITIKAVQQKDSTSDITITSTSQHFHHNQPMIQQSSSTSSSILSEKSLKDISKSTSSTSSITSSALIKQSTSTAAAAAAAATDVYEFKEPEPFEFEGRKPTSVIIHSNLDVSESKKKKTAAQKIEVMQETKTTATLPMTTPPTVPTTNRRNKKSPLKDQHHHQQQSLSDIRSAKQVKIEEKSLLDPEITQTTTALITTTVSITTTMTPPVTTTSSVSSSGGLLSITKPENPFDALRKSPSFNLNINALNEELATTVQETAKALPDLPATERQIPVTLATPSSSSLSAAVSSSSSSILTPTPALVTPQKLMPSFISPFVESKTYTTDAPHIFEMKSDDESTKSGSDQSSDNKSSKKKTEFETVKKILLSSDSSAFDDLEPPKIEKPSIADKVLKALNQQKQEEKNIIKETSSQSSSSLSVSSSQPSTLIKSEPSSSATRLSEKLTTISEMAQISFSISEPPKIELPAVIKKEIEIHLKKPILSSPEHKLDILESIAPKNNDLSETIQKLESVIQKTSNVDHFDDDSSDSTDSERRLVIEDDSQDSDNNQISPQHQQSSQQQQQQIVEIKNNNISSMASISHSSGTLTQSITTPITITQVTQAINNTKKEPLLKDEDKDFKPITITPITATINKQESSIKPTTIFKTEDILSSSSSSSSSSLLSTKCNISNFSTSKFHHQSSIFNMKPSSIIFSDSSILSDSGIKPIIEFSNTSSPLKIESGLLNQKPKHEMSIIQQQQQHNQSIMSSENNIITIPSHSTITTNSTNFTSTNLIGVTIQIPPPLPSSLKDEQISNTENLNIHSESINLLLCEETIPGSPTPIRDTAIIDIKPNIHPIESDIKPVPMDIECDTIPVGNIANVRIINTSSSPTTSMGIASGVTTTTSSSSMKTSIKCESSGGIGGVGGGGGGSVVGGTTVNTTGTGTGENQTPNSSPRDSVSQDDSGEDLKKHIEQDIVDSTKKRRRTRKHSECELISYSVSKRRRTAAAAALANVTNMTTTASKRNGSDSEDNSDIIIQRVRPTRPCQYNFLVQLDPAMNPNQRISILRKKIQELRKTYNMIKAELASIDRRRKKLRRKKNQQKLLTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00233684;
90% Identity
iTF_00233684;
80% Identity
-