Basic Information

Gene Symbol
Arid4b
Assembly
GCA_939192785.1
Location
CALNDV010000466.1:8286-15500[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.3e-29 1e-25 89.9 0.1 1 89 293 379 293 379 0.95

Sequence Information

Coding Sequence
ATGACGCAGCAAGTGGACGATCCCCCATCATTACCAGTTGGTACGGAGGTAAGCGCTAAGTACAAGGGGGCATTTTGTGAAGCAAAAGTTCGTAAGGTCGTACGTAATATTAAAGTAAAAGTTGCATATAAACAAGGATTAGGATCTGGTATTGTATCTGATGATGCTATTAAATCTGGTTGTTTATTACGTGTTGGTGCTACAGTTGAAGTTAAACATCCTGATAAACGTGAATATATTGAGGCGACGATAACAAAAATTCAAGATTGTTCACAATATACTGTTGTATTCGATGATGGGGATATAACAACATTACGCCGTACAGCATTGTGTTTAAAAAGTGGTCGACATTTTAATGAAAGTGAAACATTGGATCAGTTACCATTAACACATCCAGAACACTTTGGTAATCCAGTAATTGGTGGTCGAAGAGGCAGACGTTCACGTCATCTCCAAGAAGATAGCTCCGATGATGAAGATGAAAATGATTCAAAAAAAGTTGTCACTGAAAAAGAAGAAAATGTCGGAAAAATTGTTTGTGTTGAATCAACGGAAACAAAGAAAAAAGATAAAGAAAAATGGTTTCCTGGTTTAGTTGTATCACCAACAGCTCAAGTAACGGTTCGTATACGCGTTAAAGATGAATATTTGGTACGTTCATTTAAAGATGGTCGATATTATACAGTTCCAAAAAAAGAAGCTACTGAATTTACACGTGAATTAACAGCTAAACAAGATGGTCCAGCAGTTCAAGCAGCTCTTGAATTTCTTGATAATGGTGTTCTTCCACCACATTGGGATCGTGATGCATTATTTGGTTTAGCGAACTTAAGTGATTTCGGTGATTCAGATAGTTCAAATGATGAGCCTCGTGAAGAGAAAGACCATTTTGTTGCACAATTATATAAATACATGGATGATCGTGGTACACCATTAAATAAAGTACCATCCATAACAAATCGTGATGTTGATTTATATAGATTATATCGTGCTGTACAAAAATTAGGTGGTTACAATCGTGTTACAAGTCAAAATCAATGGAAATCGATAACAATGCGTTTAGGATTCACACCACTTACAGTCAGTGTTACAAATTTAGTTAAACAAGCATATAAAAAGTTTTTACAACCTTTTGAGGAATTTGATCGTAAATTAGGTTGCTCTATGTCAATGACACCTAGAAATTCAAATCGTAGTAAAGGTCGTAGTCTGGTTAGAGCAAATTCTGTTgcctcaccaaaaccagaagttaaagagaaacaagaacaaccgaaatcagcttctgtagcgacagtatcagttgcagctacaacatcaaatcagcagcagcaacagcagcagcagcaagttgctgaagaatcagaaaacacaagtgaatcaagtaatatgGATGTGACTAATAAACCATCAAAACGGAAACTATCAACTGGAAGTAATAAAGTAAAAACTTTGGTTGATAAATTTGAAGAGAAAAATAAAGATGAATCAGATCATCCGATAACAGCGATATCAAAATCAACAAAACAATCAACCACAAAGGATGATACAACAAATCAATTACAAACTACACCAACATCAAGCGGTCGAAGGGGAGAAAAAGGTGTTGGTAGAAAAAGTGGAACAACCCCAGTAACAGAAGAGAAACGTGGACGAAAGAAAAAAGAAGTTCCAGTTATTTTTGAATCAGAAAAGCAACATCAAGAAAGGTCTGTAGAACCAATACAAGTTACAGATTTCCCTGTTGAAGTCGGTGATAAATTGAAAGTGTATTATCATGAGAAAAAAGTTACATATGAGGCGAAAGTTATCGATTTATCAATTCAACAAGGTACTCCATTGTATTTGGTACACTATACAGGATGGAATACACGTTACGATGAATGGGTACCAAAAGAGAGGATTGCTGAAAACATTTCAAATAATAAGACAAAACGTACAAAAGGCGCTGGTGCAGGGAATCCAAAATTAAGCACAATGACAAATGAAATGTCTGCAAAATCTGCTGCAAACAACGATAGAATATTTGGTATAATAAAAACTGGAGCGAAACGAGGAAGAGGAAGGAGCGACTCCCATCCGTCTCGATCTTCCACTCCTAGCATTAGTTCAGCCACTACTCGAACAAAATCACCAGCGGTCGCTACGAATACAATGCAACGACGAACTACCCGTGGTCAACAACCAAATGCTACTGTTGCTGCAGTAACAGTAGCCGCCGTTTCTCGGCGAATCTCGAATAATATCTCTGACATATCATCATCTATGCAAACTGATTCAGATAGTGATTCAGATGATGCACCCGTTAAAAAGCCAACGAAATCAACAACTTCGTCCAACGCTTCTGGCGCTTCATCAGTTTCAACTCAAGCTACAGCTGGTTCTGTTAAAGCACCGACACCTGATGACACAAAATCAGTATCATCCACCGCGGCTAATAGTCCAAGTGAAACTGAGGAAGATGAAGCTTCCCTTGGTGTTAGTGGCACCGGTACAAACGGTACTAGTGCAAAAGGAAGAGATTATGATCTCAATCAAATTCGTTCTGAATTAAAAGGCCTGAACGAACTAAAATCGCCTTCACCAGAAGGTGATGCAGTTTCTTCACAATTGACTACATCTTCTGATAAAACTCAATCATCAGTTTTTAGTTTTGGTGGTAGTTCGACAATCGCTGAAGATAGTGTTGAGTCAACTAAACAAATAATGCCTACAAATAATATTGTGTCCACAACAATAGCACCTACAACAACAACCACAACAAAAGTGACGACATCATCTCCTCCAATAAATCCAGTAATTGCCGATTTAAAAGCATTATCATCAACAGATTTGTCTTCTGAAACCGATTCATTTGCGGATGATGATTCTCAGTCATCTGATAAAACAACAACATTGGAAAATATGACTGAAAAATTACAACAAAAAATTAAAGCTGAAAAATTGGCGCAGGCAAAATGTCTTGAACGATTAAATGCAGGTGGCCCTGTTACTGGCGGCCTTAGTGGTGTTACTGGCAAAACTGCAATAGAAAAAATTGCACCATTAAAATCAGCTGGAATTGAGAAAATCATTAAAGAATCACTTGCTGAAAAAATGCAAGAGACATTAAAAGCTGCAAACACCGCAGCAGCTGCTGCAGCTGCGGCATCAAAACCTTTTTTGATTGAGAAAAGTATCTTTAAGCCGCTCATTACATCATCATCTGTGATATCGAACATTGAAAAAGATGAAAAAGCGAAACCATCACAAATTCTTGAAATAAAAACTCCATCAAAACAACAACAGCAACTGCAAAATACATTCTTAAGTAAATCTTCACCAATTACAACATCAGAGAAAAAAATTATTGCACCTTTGATTGAAACGAAAACACCATCATCGCTATCATCGATACGTGGTGGTTTAGAAGGGCGTAAAATAACTCAGATTCTTGATAAGTCTAATACAACACCGCAAATAACAATAAAAACAGTACAACAAAAAGACAGTACTTCAGATATCACCATTACCTCTACATCTCAGCATTTTCATCATAATCAGCCAATGATACAGCAGTCATCTTCATCATCGTCTATTCTATCCGAAAAGAGCCTAAAAGATATTTCAAAATCCCCATCATCTACATCATCGATAACATCTTCTGCCTTGATAAAACAATCACCATcgactgctgctgctgccgcagctgctgctacagatgtatatgaATTTAAAGAACCAGAACCGTTTGAATTTGAAGGTCGAAAACCAACATCAGTGATAATTCATTCAAATTTAGATGCACCTGAAAGTAAAAAGAAGAAAACTGCAGCACAAAAGATTGAAGTTATGCAAGAGACAAAAATACCAGCAACACTATCAATGACAACACCACCAACGGTTCCAACAACAAACCGAAGAAATAAGAAATCACCGCTAAAAGATCAGCATCATCATCAACAACAATCATTATCAGATACTAGATCGGCTAAGCAAGTAAAAATTGAAGAAAAATCTCTTTTAGCTCCAGAGGTAACTCAAACAACCATTGCCTTGATAACAACGACCGTATCGATAACAACAACAATCACACCACCGGTAACGACAACCAGTTCTGTTAGCAGCTCTGGAGGATTACTTTCTGTAACAAAACCAGAAAATCCTTTTGATGCTTTGCGCAAATCACCAAGTTTCAATTTGAATATAAATGCACTGAATGAAGAACTagcgacaactgtacaagaaacagcaaaagctttacctgatttaccagcaacagaacgtcaaatccctgttagtttagcaacaccttcatcatcatcattatcagcagcagtatcatcatcttcatcatcattatcagcagcagtatcatcatcttcatcatcaccagcaccagccttagtaacaccacaaaaattaatgccatcatTTATAAGTCCTTTTGTTGAAAGTAAAACTTATACAACAGATGCACCACATATCTTTGAAATGAAAAGTGATGATGAAAGTACAAAAAGTGGTAGTGATCAAAGTAGTGATAATAAATCATCAAAAAAGAAAACAGAATTTGAAACAGTTAAAAAAATTTTGCTATCTTCAGATTCTTCAGCATTTGATGATTTAGAACCACCAAAAATTGAGAAACCATCAATTGCTGATAAAGTTTTAAAAGCACTTAATCAACAGAAACAAGAAGAAAAAAATATAATTAAAGAAAcatcatcacaatcatcgtctttattatcatcgccatcatctacatcatcacaaccatcaacattaataaagcctgaaccatcttcgtcagcaACACGTTTATCAGAAAAGTTAACAACAATTGCAGAAATGGCACAGATTTCATTTTCAATTTCGGAACCACCTAAAATTGAATTACCAGCCGTAATTAAAAAAGAAATGGAAATTCATTTAAAGAAACCTATATTAAGTAGTCCTGAACATAAATTAGATATTTTAGAATCAATAGCACCAAAAAATAATGATTTAAGTGAAACAATACAAAAATTAGAAAGTGTTATACAAAAAACATCAAATGTTGATCATTTTGATGATGATTCATCAGATAGTACAGATTCTGAAAGACGTTTAGTTATTGAAGATGATTCTCAAGATTCAGATAATCAAATATCACCGCAACACCAACAACCATCTCAACAACAACAAATTGTAGAAATAAAAAATAATAATATTTCATCATTGGCTAGTATTTCTCAATCATCTGGAACACTTACACAATCAATAACAACTCCAATAACAATAACACAGATAACACAAGCAATCAATAACACTAAAAAAGAACCATTAAATGATGAAAACAAGGATTTTAAACCAATTACTGTTACACCAATAACAGCAACAATAATTAAACAAGAATCATCAATTAAACCAACAACAATATTAAAAACTGATGATATTTTATCATCATCAACAAAATGTAACATTTCAAATTTCTCAGCATCTAAATTTCATCATCAATCAAGCATTTTTAATATGAAACCATCATCAATAATATTTTCCGATTCATCAATTCTATCAGATTCTGGTGTAAAACCAATTATTGATGGTAGTTGTACATTATCACCATTAAAAATTGAATCAGGTTTATTAAATCAAATACCAAAACATGAAATTAGTATCATTCAACAACAACAACAACATAATCAAGCAATTATGGCATCAGAAAATATTATAACAATTCCATCACACAGTACAATAACAACAAATTCCACAAATCTTACAAGTACAAATTTAATTGGTGCTACAATACAAATTCCTCCACCTCTTCCATCATCATTAAAAGATGATCAAATGTCAAATACAGAAAATTTAAATATTCATAGTGAATCAATAAATTTACTGTTATGTGAAGAAACAATTCCTGGTAGTCCAACACCGATTCGTGATACTGCAATCATTGATATTAAACCGAATATACATCCAATTGAATCTGATATAAAACCAGTACCAATGGATATTGAATGTGATATAATACCAGTTGGAAATATAGCAAATGTGAGAATTATAAATACGTcatcgacatcgacatcgacaacaacatcaatgggaattgcatcagtaacaaccacatcatcaccatcaatgaaaactttaattaaatgtggaaatagtggtgtaggtggtggtggtggtggtgttacgacagttaataCTACTGGTACTGGTACTGGTGAAAACCAAACACCTAATAGTTCACCACGTGATTCAATTAGTCAAGATGATAGTGGTGAAGATATAAAAAAACATATTGAACAAGATATTGTGGATTCAACGAAAAAAAGGCGACGTACACGTAAACATTCTGAATGTGAATTAATATCATATTCAGTATCAAAAAGAAGAAGAACAGCAGCAGCTGCTGCATTAGCTAATGTAACAAATATGACGACGACAGCAAGTAAAAGAAATGGTTCAGATAGTGAAGATAATTCAGATATAATTATACAAAAAGTTAGAACCACAAGACCGTGCCAATATAATTTCCTTGTGCAATTAGATCCAGCAATGAATCCCAATCAAAGGATATCAATTTTACGCAAGAAAATTCAAGAATTACGAAAAACCTACAATATGATTAAAGCTGAATTAGCAAGTATTGATCGTCGAAGAAAAAAATTGCGAAGAAAAAAAAATCAACAAAAATTATTAACATCAAGTTAA
Protein Sequence
MTQQVDDPPSLPVGTEVSAKYKGAFCEAKVRKVVRNIKVKVAYKQGLGSGIVSDDAIKSGCLLRVGATVEVKHPDKREYIEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVIGGRRGRRSRHLQEDSSDDEDENDSKKVVTEKEENVGKIVCVESTETKKKDKEKWFPGLVVSPTAQVTVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTRELTAKQDGPAVQAALEFLDNGVLPPHWDRDALFGLANLSDFGDSDSSNDEPREEKDHFVAQLYKYMDDRGTPLNKVPSITNRDVDLYRLYRAVQKLGGYNRVTSQNQWKSITMRLGFTPLTVSVTNLVKQAYKKFLQPFEEFDRKLGCSMSMTPRNSNRSKGRSLVRANSVASPKPEVKEKQEQPKSASVATVSVAATTSNQQQQQQQQQVAEESENTSESSNMDVTNKPSKRKLSTGSNKVKTLVDKFEEKNKDESDHPITAISKSTKQSTTKDDTTNQLQTTPTSSGRRGEKGVGRKSGTTPVTEEKRGRKKKEVPVIFESEKQHQERSVEPIQVTDFPVEVGDKLKVYYHEKKVTYEAKVIDLSIQQGTPLYLVHYTGWNTRYDEWVPKERIAENISNNKTKRTKGAGAGNPKLSTMTNEMSAKSAANNDRIFGIIKTGAKRGRGRSDSHPSRSSTPSISSATTRTKSPAVATNTMQRRTTRGQQPNATVAAVTVAAVSRRISNNISDISSSMQTDSDSDSDDAPVKKPTKSTTSSNASGASSVSTQATAGSVKAPTPDDTKSVSSTAANSPSETEEDEASLGVSGTGTNGTSAKGRDYDLNQIRSELKGLNELKSPSPEGDAVSSQLTTSSDKTQSSVFSFGGSSTIAEDSVESTKQIMPTNNIVSTTIAPTTTTTTKVTTSSPPINPVIADLKALSSTDLSSETDSFADDDSQSSDKTTTLENMTEKLQQKIKAEKLAQAKCLERLNAGGPVTGGLSGVTGKTAIEKIAPLKSAGIEKIIKESLAEKMQETLKAANTAAAAAAAASKPFLIEKSIFKPLITSSSVISNIEKDEKAKPSQILEIKTPSKQQQQLQNTFLSKSSPITTSEKKIIAPLIETKTPSSLSSIRGGLEGRKITQILDKSNTTPQITIKTVQQKDSTSDITITSTSQHFHHNQPMIQQSSSSSSILSEKSLKDISKSPSSTSSITSSALIKQSPSTAAAAAAAATDVYEFKEPEPFEFEGRKPTSVIIHSNLDAPESKKKKTAAQKIEVMQETKIPATLSMTTPPTVPTTNRRNKKSPLKDQHHHQQQSLSDTRSAKQVKIEEKSLLAPEVTQTTIALITTTVSITTTITPPVTTTSSVSSSGGLLSVTKPENPFDALRKSPSFNLNINALNEELATTVQETAKALPDLPATERQIPVSLATPSSSSLSAAVSSSSSSLSAAVSSSSSSPAPALVTPQKLMPSFISPFVESKTYTTDAPHIFEMKSDDESTKSGSDQSSDNKSSKKKTEFETVKKILLSSDSSAFDDLEPPKIEKPSIADKVLKALNQQKQEEKNIIKETSSQSSSLLSSPSSTSSQPSTLIKPEPSSSATRLSEKLTTIAEMAQISFSISEPPKIELPAVIKKEMEIHLKKPILSSPEHKLDILESIAPKNNDLSETIQKLESVIQKTSNVDHFDDDSSDSTDSERRLVIEDDSQDSDNQISPQHQQPSQQQQIVEIKNNNISSLASISQSSGTLTQSITTPITITQITQAINNTKKEPLNDENKDFKPITVTPITATIIKQESSIKPTTILKTDDILSSSTKCNISNFSASKFHHQSSIFNMKPSSIIFSDSSILSDSGVKPIIDGSCTLSPLKIESGLLNQIPKHEISIIQQQQQHNQAIMASENIITIPSHSTITTNSTNLTSTNLIGATIQIPPPLPSSLKDDQMSNTENLNIHSESINLLLCEETIPGSPTPIRDTAIIDIKPNIHPIESDIKPVPMDIECDIIPVGNIANVRIINTSSTSTSTTTSMGIASVTTTSSPSMKTLIKCGNSGVGGGGGGVTTVNTTGTGTGENQTPNSSPRDSISQDDSGEDIKKHIEQDIVDSTKKRRRTRKHSECELISYSVSKRRRTAAAAALANVTNMTTTASKRNGSDSEDNSDIIIQKVRTTRPCQYNFLVQLDPAMNPNQRISILRKKIQELRKTYNMIKAELASIDRRRKKLRRKKNQQKLLTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00234578;
90% Identity
iTF_00234578;
80% Identity
-