Bdis004469.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombylius discolor
Gene Symbol
Hr39
Assembly
GCA_939192785.1
Location
CALNDV010000277.1:283312-285992[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3 1.7e+04 -7.4 8.0 55 76 249 270 40 371 0.67
2 4 5.5e-10 3.2e-06 26.8 0.1 1 39 440 480 440 514 0.68
3 4 0.00044 2.6 7.3 0.0 63 139 473 557 463 570 0.59
4 4 1.5e-77 8.8e-74 249.3 0.5 194 408 564 766 548 766 0.95

Sequence Information

Coding Sequence
ATGTCCATTAATACTGGTGGGGATATATCATCCCCTAATATAGCAGTTGCAACAACAATAACAACAACTAATCAAAATATACCGCCCATATTATCTATATCTGGTAGTAACCCACCGAATTTACAACAACAATTACGAAACAATATATCAGTCACAAATATAAAATGTGAAGATATTGTTCGACCACCATCAGCACCAATTTCAACaataaatggcatttcatcatcatcattatcaacaacaagcaataataatattaataataataataataataataataataataatTTTTTTAATGGAGGAATACGAATTTCCGTACCAAAAGTTGAAGATTCAGATGAATCTGAATCAGAATTATCAAATATAGAAAATACAAAAGTAAATCGTAGACCTGTAAGTGCAAGTAAAAATGGACCACGTCCCATGTCATGGGAAGGAGAACTTTCTGAGACTGAAGATCTTATGGATACAGAAAATTCAGTTAGTAATGATACACAAATGTCAACAACAACAAAAGATGATACACGACATTGTGATATCGTTAGTGGAAAATCATCAGATTTTGATCAAATTTCTATTGAAGCAGGTTCTGTGATATATTCATCTGGATTAAAAAAATTCCAAACAGACTTGGTGAATTTAAAATATGAACCAGGGTTATCGGATGCAACAGCAAGTGGCCTTAATTCACCATTGTTAGCGAGATCAAAAACGAATTTACTTCCTGCAAATCCAAGCCCAGATTCAGCAATTCATTCCGTTTATACTCATAGTTCACCAAGTCAATCACCTTTAACATCACGTCATGCACCATACACTCCATCACTAAGTCGAAATAATAGCGATGCATCTCATAGTAGTTGTTATTCATACAGTTCTGAATTTAGTCCAACACATTCACCTATACAGGGAAGACATAATATTTATGGTAATTTTAATGGATCTCTCCATCATTCCGTTCTATATCGACCAATAATTGATGGTGCTGCAGAAACTACAACTCAATCATTAGGCTCTCCAGCACAAAGACGACCAGATGAAATTCTGCCAGAAACAGAAGCAATTCCATCACCCGGAATATCACGGCAACAATTAATAAATAGTCCATGTCCAATTTGCGGTGATAAAATCTCTGGCTTCCATTATGGTATATTTTCATGTGAATCATGTAAAGGTTTCTTCAAACGGACTGTTCAAAATCGAAAGAATTATGTTTGTGTACGTGGCGGGCCATGTCCTGTAACAATATCAACTCGTAAGAAATGTCCAGCATGCCGTTTTGAAAAATGCCTACAAAAAGGGATGAAATTAGAAGCAATACGCGAAGATCGAACTCGAGGTGGTCGATCAACGTATCAATGCTCATATACACTTCCAAATTCAATATTAAATCCACTTATTAGTCCAGATACACCATCGACAAGTGCACAAATGAATCATCGAACAACAGCAAATGGATACCCAATAAAAATAGAACAATCTGATATTTGCAATGGAAGTAGTAGTAACAGCAGTACAGGACCGAGCAGTCATCGCAACCATATTCCACCATTGTTGCAGGAAATCATGGATGTTGAACATTTATGGCAATATAATGAGGAGGAGCTTTCGAGACTGAATCATCCACCAGCTAGATCAAATACAAGTGATCTAACGACAAATCCTCTTCTTGCCAGTGCTGGTCTTTCTTCGAATGGAGAGAACACTAATCCAGATTTGATAGCCAATCTATGTAGTGTTGCTGATCATAGATTGTATAAAATTGTAAAATGGTGTAAAAGTTTACCACTTTTTAAACATATTTCGATCGATGATCAAATTTGTCTTCTTATAAATTCTTGGTGTGAATTGCTATTATTTTCGTGTTGCTTCCGATCCGTTGATACTCCTGGTGAAATAAAAATTTCTTTAGGTAAATCTATAACGCTTGCACAAGCAAAGTCTAGTGGTTTGCAGGCCTGCATTGAAAGAATGCTTAACCTTGCCGAACATTTGAGACGATTACGTGTTGACCGATATGAATATGTTGCCATGAAAGTTATTGTTCTCTTACAATCCGATACATCGGAGTTACGAGAACCAGTTAAAGTTAGAGAAAGTCAAGAGAAAGCATTACAAGCATTGCAAGCTTATACATTAGCTCATTATCCAGAATCACCAGCAAAATTTGGAGAATTACTATTAAGAATTCCAGAATTGCAAAGAACATGCCAGCTTGGTAAAGAAATGTTAACAATAAAATCAAAGGACGGTGAAGATTTTAATCTGTTAATGGAACTTTTACGTGGAGAACATTGA
Protein Sequence
MSINTGGDISSPNIAVATTITTTNQNIPPILSISGSNPPNLQQQLRNNISVTNIKCEDIVRPPSAPISTINGISSSSLSTTSNNNINNNNNNNNNNNFFNGGIRISVPKVEDSDESESELSNIENTKVNRRPVSASKNGPRPMSWEGELSETEDLMDTENSVSNDTQMSTTTKDDTRHCDIVSGKSSDFDQISIEAGSVIYSSGLKKFQTDLVNLKYEPGLSDATASGLNSPLLARSKTNLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNIYGNFNGSLHHSVLYRPIIDGAAETTTQSLGSPAQRRPDEILPETEAIPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSILNPLISPDTPSTSAQMNHRTTANGYPIKIEQSDICNGSSSNSSTGPSSHRNHIPPLLQEIMDVEHLWQYNEEELSRLNHPPARSNTSDLTTNPLLASAGLSSNGENTNPDLIANLCSVADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCFRSVDTPGEIKISLGKSITLAQAKSSGLQACIERMLNLAEHLRRLRVDRYEYVAMKVIVLLQSDTSELREPVKVRESQEKALQALQAYTLAHYPESPAKFGELLLRIPELQRTCQLGKEMLTIKSKDGEDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00234046;
90% Identity
iTF_00234046;
80% Identity
iTF_00234046;