Bter009240.1
Basic Information
- Insect
- Bombus terrestris
- Gene Symbol
- bab2
- Assembly
- GCA_000214255.1
- Location
- NC:1472413-1487676[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.9e-13 9.5e-10 37.2 0.0 1 39 569 608 569 612 0.90 2 4 2.7e-12 3.8e-09 35.3 0.1 2 39 624 661 623 664 0.94 3 4 7.7e-19 1.1e-15 56.2 0.0 2 45 679 723 678 723 0.97 4 4 8.8e-19 1.2e-15 56.0 0.1 1 42 730 772 730 773 0.97
Sequence Information
- Coding Sequence
- ATGTTGTTCGCCGTTCGTCGTATGTCGTTCGTCGCTCGTCGTTCGTCGATGTTTCATTCTCGATCCTCGATCCTCTACACGCGGCCCTCGATTCTTCATTCTAGATCATCGTTTCCGTTGTTCGCGTTGTCGTCGTTGGTCAAACCGCGAAAGTGTTTCTCCATATCGTTGCACCGCGAAAACAGCAACTGGTTGTGCACTGTCCGCTGCCGTTACCAACAGTTggctttttctctttccgatcggtctttattttccttcacTCATCCGCCTCCGTTCCCTTCGGCCACTGACGCTCGATTCGTTCCACTCTTCGATCCTCTTACCGATCTCTATCTATCTTTCTTATTCTCTTCTCTACCGGTTTCTCGctatctctttattttctcagCCACCGCAAATACGATCTCGACCGAACGATCTCCGCGCCGCCGATACTGTGCCGGAAAGGAGAACGAATATTTCATGGAGACGGATCGTTATTGGGGCGTGCACTACAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAATAACTATCAGTCGAACATGACGTCCGTTTTCCACCAACTCCTTCAGACGGAAGCTTTCGTCGATGTTACCTTAGCATGCAACGAAGCTTCTTTAAAGGCACACAAGGTGGTACTATCGGCGTGCAGTTCCTACTTTCAAAAGCTTCTACTTTCAAATCCCTGCAAACATCCGACAATCATTATGCCCCAAGATGTGTGCTTCAATGATCTCAAGTTCATCATAGAATTCGTCTACAGAGGAGAGATCGACGTTTCGCAAGCCGAACTTCAGTCACTGTTAAAAACAGCCGATCAGCTAAAGATCAAAGGACTGTGCGAGGTACCTGAAAGCAGAGACGGGCCACCATCGGTAAGTCTGAGTTCGCCGCCAAGAGAACCCGGTACTCCTAGAATAAATTTCACCAAGTTGAAGAGACATCATCCAAGGTATAAGAGGCCCAGAACCACGTTCGAACCTCGCGCTACGGATTCGAGGCATTACGATCGATACAAAGAAGAGGAATCGAACGAAAACTACGATTGGGAGAACAAAGAGAATCACATAGACTGGCAACCCGAAGATGAGGAGTGCACGGAGGCAACCGCGGGAGCAGTAGTCTTGGAAACTTGCCAACGTAGCAGTAACAATAGTACCACTACTGGCACCAccaataataacaacaacaacaacaacaacaataataataacaacgcTAGCAGCAACGGCAACGGTAACAATACGagcaacaacaataacaacggtgACATGTTTTGTCATACAGGCCTCGGTCATTACGGTCATCATCCGGATCCCGGAGAGGTTGACCTACCTCCAGAAACTCAACCTACACCACCAAGTGCCACGTTGGTCGGTACTACGATTACACATTTAAGGGACCCGGATCATCATTCCACAGAGATCCAAAATTGTGACAGTGTAAAGATCAAGTTCGAAACATTGCACACGATGGATTCGTCGGAcacgatcgatatcgatagCCACATGTCGGATCGAGCGAGCGTCAGTTCAAAGAACGCGGCCGATAGCGACAACATGATGATGATCACACCGGAGTTGCTTGGATTAATGCCTTCTGGAAGTTCGGTTCACTCGGATTCCGGTGAAAATAACTCAAGGGGTCACCCCGGACAATCCAGCTCTCATCATCATGGTTCGAAATCGTGGACGCAAGAGGATATGGATGCCGCTTTGGAAGCCTTACGAAATCACGATATGAGCCTTACGAAAGCCTCCGCAACGTTCGGTATACCCTCGACGACTTTATGGCAAAGAGCGCATCGACTGGGCATCGACACTCCAAAAAAAGACGGGCCTACTAAGTCGTGGAGTGACGAGAGTTTAAACAGCGCGTTAGAAGCGTTACGGACCGGAACGATATCGGCGAACAAAGCTTCAAAGGCGTTTGGTATACCGTCGAGTACCTTGTACAAAATCGCGAGAAGAGAAGGTATCAGGCTGGCTGCGCCATTCAACGCAAGTCCCACAACGTGGTCGCCCGCCGATCTAGATCGCGCTCTCGAAGCGATACGTTCTGGTCAAACGTCAGTACAGAGAGCTTCCACGGAATTCGGTATACCGACGGGAACCTTATATGGTCGATGCAAAAGAGAAGGCATTGAACTCAGTAGGAGTAATCCTACACCGTGGAGCGAGGATGCTATGACCGAAGCTCTCGAAGCTGTCAGGTTAGGCCATATGAGCATCAACCAAGCGGCTATTCACTACAACCTGCCCTACTCTTCCTTATATGGTCGCTTCAAAAGAGGAAAATACGAAGAACCAGCGGTGGGTGAAATATCGCAAGACGGTAGCAGTCCTCACTTTCATCAAAGCCCGAGTCAAAATCATTCGTCCGCTGTACCCGATCAAATGCCGTACCAAGGCAGCTGA
- Protein Sequence
- MLFAVRRMSFVARRSSMFHSRSSILYTRPSILHSRSSFPLFALSSLVKPRKCFSISLHRENSNWLCTVRCRYQQLAFSLSDRSLFSFTHPPPFPSATDARFVPLFDPLTDLYLSFLFSSLPVSRYLFIFSATANTISTERSPRRRYCAGKENEYFMETDRYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRPRTTFEPRATDSRHYDRYKEEESNENYDWENKENHIDWQPEDEECTEATAGAVVLETCQRSSNNSTTTGTTNNNNNNNNNNNNNNASSNGNGNNTSNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHPGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGEISQDGSSPHFHQSPSQNHSSAVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00221838;
- 90% Identity
- iTF_00230773;
- 80% Identity
- iTF_00230773;