Basic Information

Insect: Bombus superbus
Gene Symbol: stc
Assembly: GCA_014737385.1
Location: JACXIK010000030.1:121040-126857[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.5e+04 -4.4 1.6 15 19 556 560 555 560 0.81

2 13 0.17 1.2e+03 -0.7 0.3 4 10 589 595 588 595 0.94

3 13 2.6e-05 0.19 11.5 14.9 4 19 606 621 604 621 0.93

4 13 2.8e-07 0.0021 17.8 16.4 1 18 657 674 657 675 0.97

5 13 1.8e-08 0.00013 21.6 10.3 1 19 713 731 713 731 0.98

6 13 1.1e-06 0.0079 15.9 11.8 4 18 778 792 771 793 0.86

7 13 2 1.5e+04 -4.7 1.6 5 10 822 827 822 827 0.90

8 13 0.00059 4.3 7.2 8.4 1 11 833 843 833 844 0.97

9 13 2e-10 1.5e-06 27.9 13.8 1 19 860 878 860 878 0.98

10 13 0.51 3.7e+03 -2.2 0.6 5 10 906 911 906 912 0.89

11 13 2 1.5e+04 -8.4 11.4 10 19 925 935 914 935 0.77

12 13 2.2e-07 0.0016 18.1 12.3 1 16 971 986 971 997 0.85

13 13 9.8e-05 0.72 9.7 14.7 1 19 1003 1022 1003 1022 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.5e+04	-4.4	1.6	15	19	556	560	555	560	0.81
2	13	0.17	1.2e+03	-0.7	0.3	4	10	589	595	588	595	0.94
3	13	2.6e-05	0.19	11.5	14.9	4	19	606	621	604	621	0.93
4	13	2.8e-07	0.0021	17.8	16.4	1	18	657	674	657	675	0.97
5	13	1.8e-08	0.00013	21.6	10.3	1	19	713	731	713	731	0.98
6	13	1.1e-06	0.0079	15.9	11.8	4	18	778	792	771	793	0.86
7	13	2	1.5e+04	-4.7	1.6	5	10	822	827	822	827	0.90
8	13	0.00059	4.3	7.2	8.4	1	11	833	843	833	844	0.97
9	13	2e-10	1.5e-06	27.9	13.8	1	19	860	878	860	878	0.98
10	13	0.51	3.7e+03	-2.2	0.6	5	10	906	911	906	912	0.89
11	13	2	1.5e+04	-8.4	11.4	10	19	925	935	914	935	0.77
12	13	2.2e-07	0.0016	18.1	12.3	1	16	971	986	971	997	0.85
13	13	9.8e-05	0.72	9.7	14.7	1	19	1003	1022	1003	1022	0.97

Sequence Information

Coding Sequence: ATGGCTACTTGGGATGGTTCTTATTCAGAACCAGATGACCAAAATTATTGCCAAATGTATTCTGATCAAAGCGTACCTGGGCCTGCAACAGGAAATTGGACATTATTTTCTGATAATATAAATAACGATTATTTACAACCTAATCGTGAGTTCTATATACAAAATGAACCTATGTTTGAACAGAACAGTCCAAATACTTTCTATCATTCGAACACGAATGTTATGCCAAGTTTGTTGACTACAACCAATAGTTATCACAGGCATGTAATAAACCCAGTAGGAAATACACAAGTATTAAATAGTGAAGAGTACTTTCCAACTGTTGTCAAATCTCAACAAGGCTACGTATCTGATGACTCTTGGAAATATGATAACAATTTAAAGACAAAGAGAATTAAGGAATCTTCGGCGAGCATAGTTAATCACTCGAAATTACATGTCATGGCTGAAGAGTTTGTGCCAAATAATAGAGGATATGATGATAAAAATAAAAATAAAGAGTTAGAGAATACAAAATTTACTAATGATGCAAATTATTGTGTCAAGGATAATAGCAAGATATCAGATAAATATTTCTTTTCTAATGAGAGTAGACATGAAAGGAAATACAATAACAAAAAATGTTCTAATTATAAAAACAAAGAAAGACAGCAAGATCAGTGCTACAAAAAAGGTGCATATACAAATTCCTATCAACAGCATGTCAAAACTTCTCATAAACTTCAAGGTAATAAATACTTTACTAATAAGTATTATGCAGGAAAATCACAAGTAAATTCGAAAGGTATAAATGAAAATGCGTTAGATCAATGTTCAATGACTAATAGTGCTACTTGCAATAGTAAAAAAGATCCTGTAATAAATTTGAATAAAGGAGAATCATCTTTAAGTATGAATGTATGTTCGCATAAAAATAAAAATTTGTCGAATGAGGTTAATGATAAAAGAACTATTATTGGTGATAATAATGTACAAGGTGATAGCATACAGCAGCCCAAAAATCTGACGAAGGAATTTAGTTATTATAATTCTGGCTTCAAACAGATCTACAATAATCATAGAAATGTAAGGAAATATCAGTATAATGATAGATATAACAGGGAAGAAAATTTTTATAAAGAAAAACGACATCACTATCCAGGATACGGTAGAGAAAATTATAACAAAGAAGACAAATTTAAAATAAGAAATGAAATGTGCAGTAATGGAGAATTTAACGAATATAAAGAATGTTTCAACGAGGAAACTGGATTAGAAGCAAAAGAAATAAAAGAGAAAAGGCACAGCTATCAAGGATATAATGGATTTAAAGAACATCATAAGGAAGCTAAACTAGAAATTTTCAAAGAGAAAGATAAAGGTAAATATTACGTATCTGAAAATAAAGAGAAAGGAAATGAACATTGGAGAAATAAAAGGGAAATTAGCGAAAGAAATAATTTTCAGAAACGGGGACAAAATAGAAAGTCACCAGTTGATGATGATGCAAGTCAAAGAGAAAGACTAGCAGAACAGTTGAATAGAGGACAATTAGAATGTTTAGTATGTTGTGAATATATTAAACAGAATGATTATATTTGGTCATGTTCTAACTGCTATCACGTGTTGCATCTGAAATGTATTAAAAAATGGGCAAAGTCGTCACAATCTGAAAATGGTTGGAGATGTCCAGCATGTCAAAATGTTAACTTAGTAATTCCTGAAGATTACTTTTGCTTTTGTGGCAAAACAAGAGTACCTGAATGGAATCGTAGGGATGTCGCACATTCTTGTGGTGAAATTTGCGCTAGAACATTATCCAAAAATAGTTGTCCACATAAGTGCACTCTTCTATGCCATCCTGGATCTTGTCCACAATGTACAGCAATGGTAACAAAATATTGTGGCTGTGGTAAAACTCAGCAAACAGTACAGTGTAGTACTCAGAAATTATTGTTGTGTGAGTCTATATGTGGTAAAGATTTAAATTGTGGCAGGCATAAATGTCAAAGTAAATGCCATCATGGAGAATGTGCAAATTGCGAAGAAACAATAACGCAGAAGTGTTATTGTGGCAAAAGTACAAAAAAAATAACTTGTCAGACTAATATTTCGTTTACATACTCTTGTGAAACTATTTGCGGTAAATTGTTAGAATGTGGTAATCACACCTGTACAAAATTATGTCATGTGGATGCTTGTGAACCCTGTTCTTTAACTCCTGACAAAATTACAACTTGCTGCTGTGGACAAACACCATTAATAGATAAAAGGCAAACTTGCTTAGATTCAATCTCAGTCTGTGACAAAATATGTTTGAAAAATTTGAAATGCGGGCAACCTAATAATCCTCATAAGTGTAAAGCAAAGTGTCATGTAGGAGATTGTCCTGTTTGTGACTTAACTACCAATGTTAGGTGCCGCTGCGGAAACATGGATAGGGAAATAGCTTGTAAAGATTTGATAACAAAAGCTGATGATGCACGGTGTGAAAAGAGGTGTACAAAAAAAAGGTCTTGTGGCAAGCATAAATGTAACCAACTGTGTTGTATAGAGATAGAACATATTTGTCCGTTAATATGTTCTAAAACTTTAAGCTGTGGAAGACATAAATGTGAACAAAGTTGTCATAAAGGAAGGTGTCAACCTTGTTGGCGAAGTAGTTTTGACGAATTATACTGTGAATGCGGGGCTTCTGTGATATATCCTCCTGTTCCTTGTGGGACAAGAAGACCTACATGTGACAGGCCTTGCTCTCGACAGCACTCTTGTGGCCACGAAATATTACATAATTGCCATAGTGAATTAAACTGTCCACCTTGTACTGTTCTTACTCAAAGATGGTGTCATGGCAAACATGAGTTACGAAAAGCTGTACCATGCTACGTTAATGAAATTTCATGTGGCTTGTCATGTAACAAGCCCATATCCTGTGGTCGACATAAGTGCATTACTATTTGTCATTCTGGACCATGTGAAAAACCAGGGCAACAATGTTCTCAGCCTTGTACTGTTCAAAGGGAATTGTGTGGACACATCTGTGCTGCTCCATGTCACGGGGGTAAATGTCCAGATACACCTTGCAAGGAGATGGTTAAGGTGACATGTCAGTGTGGGCATAGGACTATGTCGCGTGTTTGCGCTGAAAATTCTAAAGAATATCAGAGAATAGCAAGTAGCATATTAGCTAGTAAAATGGCTGATATGCAATTAGGTCATTCTATTAATTTGGAAGAAGTATTTGGTCAAGGAGCAAAGAAGCAGAATCAGTTAAAAACTTTAGAATGTAATGATGAATGTAAAATAATAGAACGAAATAGAAGATTGGCGTTGGGTTTGCAAATTGCAAATCCAGATTTAAGTGGAAAACTAATGCCTAGATATAGCGACTTTATGAAACAGTGGGTTAAAAAGGATCCTCATTTTTGCCAGATGGTTCATGACAAATTAACCGAGTTGGTTCAATTAGCAAAAAACTCTAAACAAAAATCACGCAGTTATTCCTTTGATAGCATGAACAAAGATAAACGTCGTTTTATTCACGAGTCTTGTGAACATTTTGGTTGTGAAAGCCAGGCATATGATCAGGAGCCAAAAAGAAATGTTGTTGCGACTGCTGTAAAAGATAAGTGTTGGTTACCTAGCTATAGTTTATTAGAGATTGTACAACGGGAAAATGGTCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAAGCTGATGGGTCTGTGAAGACAATATTATCACTGCCTGCGAAAAAGATCCAAAAGCCAGAAACACCATTAAGCATAAAAACATCAGAACCAGAAATAGATTATTTTGATTATAAGGGTTAA
Protein Sequence: MATWDGSYSEPDDQNYCQMYSDQSVPGPATGNWTLFSDNINNDYLQPNREFYIQNEPMFEQNSPNTFYHSNTNVMPSLLTTTNSYHRHVINPVGNTQVLNSEEYFPTVVKSQQGYVSDDSWKYDNNLKTKRIKESSASIVNHSKLHVMAEEFVPNNRGYDDKNKNKELENTKFTNDANYCVKDNSKISDKYFFSNESRHERKYNNKKCSNYKNKERQQDQCYKKGAYTNSYQQHVKTSHKLQGNKYFTNKYYAGKSQVNSKGINENALDQCSMTNSATCNSKKDPVINLNKGESSLSMNVCSHKNKNLSNEVNDKRTIIGDNNVQGDSIQQPKNLTKEFSYYNSGFKQIYNNHRNVRKYQYNDRYNREENFYKEKRHHYPGYGRENYNKEDKFKIRNEMCSNGEFNEYKECFNEETGLEAKEIKEKRHSYQGYNGFKEHHKEAKLEIFKEKDKGKYYVSENKEKGNEHWRNKREISERNNFQKRGQNRKSPVDDDASQRERLAEQLNRGQLECLVCCEYIKQNDYIWSCSNCYHVLHLKCIKKWAKSSQSENGWRCPACQNVNLVIPEDYFCFCGKTRVPEWNRRDVAHSCGEICARTLSKNSCPHKCTLLCHPGSCPQCTAMVTKYCGCGKTQQTVQCSTQKLLLCESICGKDLNCGRHKCQSKCHHGECANCEETITQKCYCGKSTKKITCQTNISFTYSCETICGKLLECGNHTCTKLCHVDACEPCSLTPDKITTCCCGQTPLIDKRQTCLDSISVCDKICLKNLKCGQPNNPHKCKAKCHVGDCPVCDLTTNVRCRCGNMDREIACKDLITKADDARCEKRCTKKRSCGKHKCNQLCCIEIEHICPLICSKTLSCGRHKCEQSCHKGRCQPCWRSSFDELYCECGASVIYPPVPCGTRRPTCDRPCSRQHSCGHEILHNCHSELNCPPCTVLTQRWCHGKHELRKAVPCYVNEISCGLSCNKPISCGRHKCITICHSGPCEKPGQQCSQPCTVQRELCGHICAAPCHGGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSINLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWVKKDPHFCQMVHDKLTELVQLAKNSKQKSRSYSFDSMNKDKRRFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKADGSVKTILSLPAKKIQKPETPLSIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00217441;
90% Identity: iTF_00217441;
80% Identity: -