Bsup002547.1
Basic Information
- Insect
- Bombus superbus
- Gene Symbol
- dl
- Assembly
- GCA_014737385.1
- Location
- JACXIK010000477.1:22773-24376[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-19 7.7e-16 58.2 0.1 24 73 60 109 56 112 0.96 2 2 0.0025 7.2 6.3 0.0 147 169 114 137 110 137 0.84
Sequence Information
- Coding Sequence
- ATGGGTACCGTGGGTGAACGCCTGAGCCCCTTCTGTCCCACCAAACCTGAAAAAATTGTGTTAGCCGAAACAGTTGTGTTACCAGAGTCTAAAGATCAAACAATTTTTGAAGTTCTAAAATTTTTGATGCAGTTGAAATTATCCAAATTACTGATCTTGGGTTTGTGTAATGTAATCGGCAGTATACCCGATGTAGACAATACACCAGAAAAGAAAACATTTCCTAGTATAAGAGTAATTGGATACAAAGGTCGAGCTAAAGTTATAGTATCATGTGTAACAAAAAATCAGCCCTATAGACCTCATCCTCATAATCTTGTTGAGAAAGGAACATTTTTCTTAGAGAAAACACAGAAAGGAAAGTTCAATATATCATTACCATCAGTTGCTTCTAACCCTATATTTGATAAAAAGGTAACGGCAGATCTTGTGGTGTGCGAGCTCAGTCGCTCTAATATATTGGTAGCTGGCGGTACGAAAATGATTTTATTATACGATAAGATGGTAAAGAATGATATGCAAGTTAGATTTTCTAAGGAGAAGGACGGGCAAGTAGTTCGGGAAAAATTCGGTGATTTTGAACCCGCTCGTGTACGTAAACAAGTATGTACAACATTTAACTACTCAAGAACACCCACATATAGCATGCAGGAAGTGACGCAATTGGTGCAAGTATATATTTAA
- Protein Sequence
- MGTVGERLSPFCPTKPEKIVLAETVVLPESKDQTIFEVLKFLMQLKLSKLLILGLCNVIGSIPDVDNTPEKKTFPSIRVIGYKGRAKVIVSCVTKNQPYRPHPHNLVEKGTFFLEKTQKGKFNISLPSVASNPIFDKKVTADLVVCELSRSNILVAGGTKMILLYDKMVKNDMQVRFSKEKDGQVVREKFGDFEPARVRKQVCTTFNYSRTPTYSMQEVTQLVQVYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -