Bson010468.1
Basic Information
- Insect
- Bombus sonorus
- Gene Symbol
- dl
- Assembly
- GCA_029958995.1
- Location
- JARWAU010000010.1:4415642-4425405[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-29 1.5e-25 90.7 0.1 1 95 37 127 37 140 0.95 2 2 0.033 1.5e+02 2.9 0.0 139 169 131 162 127 162 0.80
Sequence Information
- Coding Sequence
- ATGATCGTCAACGAAGtttccgtcctggtgccactcactctttcgcaccctaccCCGGTCAAGGCCGGTGCCCCACGGGGAGCCCCACGAGAAGGTGAGCATTGCTGTGTTGAAATATTAGAACAGCCGGCAAATAAAGGCTTATGCTTTCGTTATGAATGTGAAGGCAGATCAGCTGGTAGCATATCGGTAAATAATACACCAGAAAACAAAACATTTCCTAtTAGATACAAAGGTCGAGCTAAAGTTATAGTAGCATGTGTAACAAAAGATCAACCCTACAAACCTCATCCTTATAATCGTGTTGGGAAGAGAACATTTAAACGCGGTGTATATACAGTAGAAGTGCCATCAGAATGTATGACTATCATGTTTGCAAATTTTGATCCCTGTCGAAcTGGCTTTGAACATAAGAAGAAACCTGCTAAAGAAAATATGTTCAATATACCATTACCATCACTGGTATCTGACCCTATATTTGATAAAAagaTAATGTCAGATCTTGTGATGTGCGAGCTCAGTCGCTCTAATATGTCGGTGGCTGGTGGTACgaaaatgattttattatacGAGAAGGTAGCAAAAGATAATATGCAAGTTAGATTTTCCAAGGAAGAGGACGGAAAATATGTTGCTGATAAGAAGAAGCTTCATGATACCCTGGCTGGGGCCGGGGGATACGGAGCACTGGAGGTTCGAGTAGAAGACATCAGGATCTCCAGAGGTGGCCTTGAATCAGCCTGGATAAGGTGTCCGACGGCAGCAGCGCGGAAACTAATCCGAGCGGGAAGAACTGCTCTGAACTGA
- Protein Sequence
- MIVNEVSVLVPLTLSHPTPVKAGAPRGAPREGEHCCVEILEQPANKGLCFRYECEGRSAGSISVNNTPENKTFPIRYKGRAKVIVACVTKDQPYKPHPYNRVGKRTFKRGVYTVEVPSECMTIMFANFDPCRTGFEHKKKPAKENMFNIPLPSLVSDPIFDKKIMSDLVMCELSRSNMSVAGGTKMILLYEKVAKDNMQVRFSKEEDGKYVADKKKLHDTLAGAGGYGALEVRVEDIRISRGGLESAWIRCPTAAARKLIRAGRTALN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -