Bsib020737.1
Basic Information
- Insect
- Bombus sibiricus
- Gene Symbol
- BAZ2B
- Assembly
- GCA_014737505.1
- Location
- JACXIM010000076.1:192571-352943[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-22 1.3e-18 66.7 0.0 4 76 599 671 596 672 0.94
Sequence Information
- Coding Sequence
- ATGGAGAAGGAGAACTCCGCATCGGGCGGAGGTGGCGGGGGCGGTGGAGGCGGCGGAGGTGAAGCGGCGGCCACGGCGACTCCAGGCGCCACCTCCGCCTCCGAGAAACTGCAGGCGGACCAGGCCAATCCGTTGCTCGATCCGACTGCGCTCTTCGGTGCGTATTGGCCTCGAGGTGATAGTGCAGCTTCGTCGCTATTTGGAGGAATGCCGGGCGGATATGGATTGGGGGCCCATCATTTACCATCGGCTTATGCCATCTTGGGCCGTGGTGGCTCTGCTCCCGGATTCGGGGGCCACACACCAGCTTCCGCTCCACCACCACCTCCATACTCCCATAGCAGCCTTGGTACTCTGAGTGTAGCTGCCAGTCAGGCTGCGAGTTTAGGTATCAATCCTGCTAGTGCAGCATGGTGGACAATGGCCTCACATTTAGCTGCACAGGACTACCTCGCGAGGTTACAAGGAGCGGCAGGGCTACCCGGATTTCCGCCTGGTGCCGAGAGCCTTCTGCCACCCTATCCTGCCTCTCTACTTAATCCCCCGTCCCTATCGTCCCATAAGTCTAGTAAGTCTAAGTCAAGCAAGAGTCACAAGACGCCAGCGAGCAGTAGCAGCTCGACGACGCCGAGTATGACGGGCAGCAGTTTACCGGTTTCGACTCAAGCACCAGTCACGTCGTCTCATCACAGCACGTCGACCAGCAGCACGCCGAATTCGCAAACGAACGTTGTCAGCGATCCTAGCAGTATATTAGGAGGTGTACGCCTGCCACCTGATACGGAGATTATCAAGTACACGTCGAGCATAGTCGGTCCAAAGGTTCCTGGCACAACGAACCGCGGGAGGAAGAAGACTATATCCTTAGACACACCGAGTGTGAGTGTGCATCCACCGCCGGTACCTGCTCTGAGTGCTCATCAAACAAACACTACGACATCTTCGTTAATGATGGAACCGAGAAAATATAATCGCACGGGGACCGAGTCGAACGATTATAGGGAGTCGGTGGATCGCGTGGAGGTGATCAAACTGCCGGCACACTCGACAAACGGCTCTGCCTTACCAGCTCCATCGTCGTATACAACAACCACTAACGCGAGCAATTCGAATGATTCGGACGCGCCGCTGAACCTCTCGCTGAAACCCTCGACGACGAGCAGTAGCTCGCCGATTTCAGGCAGTCAGCCGCTCAGTCAGCTCAGTAATTTAAGTCAGTCGTTACTCGCCTCCGATCGAACTTCGAGAAGAAAGCCAGGACCGAAGCCTCGAAGGGTACCACAAAATTCCGTACCGGTGCCAGCATCGCCGAGTCCATCCTTGGCGCAGCTGTTCGCTGCAGCGGATTCACCTCAACGACCGAGCAGCGGAAGCGAGGAGAGCGAGAGCGCCAGCACGACCCACCACAAAGATGGTCGACCGAGAAACTTGGGCCGTGGAGTATCTAAACCGAAGAAGAACACGGTGGCTTCGCTGCTAGCTCAGAGTAGAGCTTTGGGAATCAAACCGACGCCCACTTTGGATCCTAGTGTGCCATTGTCTCATCAGGTCTCGTTACTTAGGTCGAATATTCTGGCTGCTCAATTGCATGCCACTGCCACTGGCCAGACTGATGACAAGAATCAGCGGTCTTTACAGGAGAAGATGAAGAACAAGGTGCTCGAGGTATCCGGTGAGGAGAGTAACATGGATGTGACGAGCGAGAGCGGCAGCAACACCGACGTTGTGACGGACACCGACGACGACAACGCGGATGGCGTGTCTAGCGCGAAGAGAAGAAAAGTGAAGCCTAGCGAGAGGGATCTCCAGGTGCCGCTTGAGCGTGGCTGGAAGCGAGAGACCGTCATCAAGGGATTAGGAAAGTCAGGGGTGATAAAGGGTGACGTGTCTTATTATAGTCCTTGTGGAAAGACGTTCAGGAGTAGTCCGGATTTGGCGAAGTTTTTGGAGCAACAGAATCCACCCGACTTAACGACGGCAAACTTTTCGTTCTCGTCTCGTCCGCTTGTGGGTGAATTCCTGCAGCCAACGATGGGTCTCGCGGAGGCGGAATTCGTTAGGTTGGGCGCTCAGGAAGTTGCGAGAAGATTGGAGGAGTTGAGAGCCGCAGGTGGTTTCAGGGACGTGCGAACAAACAATCAGTACGAGAGGGAGAAACTGGCATATGCAAAAAAGCTAGCGAAAGAGGAGGCGCAACGACACAAGGAGCAGGCTAGGCTCATCAAGGAGCAAGAGAAAACGGAAAGGCAGGAAGCAGTGAGGCGAGAACGGGAGATTCGAAATCAACAGCTGCTCGAGGCTCGGAAAAAACGGCAGGAAGAGGTGGAGAAGATACGACTGGAAGAGCAACAACGGAAGCAACAGGAACGAGAACTGAAGCGGCAGCAGGCGGTTATGCTGAAAGAACAGATGTACATGCAGGAGCTCACCAAGCAGCGCGAGATGCTCTACACCGTCGAGCTGGAGAGAGAACGAAGGAGACAGCACATGGCGTTGGTTCGAGCGTTGGAAAATCGACGAAAAATGGAGGAAAGAGAGAAGAAACGGTTAGAGGCGAGAGCCGAGAGAATAGCGACGAAGGAGAAACGAGCTGAACAGAGGAAGGTTGAGATGGAACTGATCGAACAGATCAGAAAGCCTGTCGAGGACATGGAGCTAACGGATCACAGACCACTGCCAGAATTGAAACGACTACCTGGTCTCAAGCTGTCCGGTCAGGCGTTCGCTGACATCGTGATGGTGTTCGAATTTCTGCATAATTTCGGCGAGACTTTAGGCTTCGATATGGAATCGCTGCCAAGCCTAAAAAGCCTTCAACTTGCGCTGCTAAACGACGAGGAAGCTGAGGAAGAACTCCTTTCCGTGATGACACATCTGTTAGTATGCGCGATCGAGGATCCAGGAATCCCTCAACCAGCAAGGCACACAACCGGTCTTGGTCAAAGTTTACGTCAAGCTGATATAACGCACGCTAACATCAGCGAAGTCTTACGAATCTACTTGTACGCGAACGCTACAGGCGAAGTGAAGGCTTTGACAGGAGTATGTCTGGAACGAGAACGCGACAAGAAATTCGCAGATCATCATCAGAATGGCGGTGACTATGCCTCCACCTGTTCAGGCAAGAACGCCCAATTCTACGAACACTTGCACAACAACGAAACATGGAAGATGTCCGAGAGGCTGAGGGACAAACCGTTCCTGGCCTTGAATCCCACGCATAAGGCGCAGATGCTCGGGTTTCTCTGCAACGAGCTATTGCAGAACAAGGCTGTGATCAGACAGATCGAGGGTAGCTTGGAGACGGTAGCTCAATTGAGGAAAGAGAGATTTGTGTTGGATACAAAAATTAGGAAATTGAGGCAGTTGCATAGTCGAAAGGTTCGAATGGAAGCAGTTGGCGTAATCGTTAACAAAACTGGAGATACTATTACGATCGAGAAGAAAGAGGTTGACGAGGAAGGTAACACGACGTCGACAGCAGTGGGGACGACACCCACTCCTGATGAAATTCATCACGAAGACGAGGTTGAAGACATGTCCGAGAACGAGAGCGAAGGAACTCAGCCCGAGGAGGAGGAGGACAAAAATCTGTCCGGCGAAGAGCTGGGTAAAAAATTGGATAAACTGTTGAAACAGTCAGAAGAACAATTGCAGAAATTGAACAGCTCCTCGAAACAGCTACGAGCACATATATTTGGGCAAGACAGATGCTGGAGAAGATACTGGGAGCTGGCATGCGCTGGTGGCATCTTCGTCGAAGCTATGGAAAGCGCTGAACCAGAAATCCTAGAGTTGCAAGCTGAACTAGACGAAAAGTACAAAAACGTGTCGATGGAGGAAAAATCAGAAACGAAGCAGGAGGACACCAAAGTCGAGAATCGCGAGAACGAAGCTCCCAACGATGTAAAGAAGGAGAAGAAATTCAATTCGAGCGAGCAAGAGGCCGACGTCAAGCCTTTGGCGGATAAAACGAAATCTGAAATTGAAGATGTTAATTGCAAGAAAGAACCTATGCAAAACTGCGAGAATTTGGCGAACATGAAGGAAGAGAAAAAGAATGATTTGGATAGTTCGATGACCGATGCGAAGACCAACGTCACGTCTGAAGAGATTAAACAAGAAACAGAGATAGTTAGTATGGATGTCGATATCAAGGAAGAGACGAAGAAGGAGAACGACGAAGCAGATGAAGACACGAAACCAGCGGTGAAGATAATGGAAGATAAAATCGTCGAAACAATTCCAAACGGTGATAAGTTCAACCATGTTAACAATCTTCATAATGGAAAAGAATTAAACGGCACCTTTATATCTAATAATAGCAACGAATCCAATTGGTTCTCGATTTTACCTCGCGAGACTTGCGATACTCCAGGACCAAGTACCAAGCAAATATTTGGAATAGCCGAACCAACCGAACTGAGAATACCAGTGTTCCCTCCGCCGGCTAGTCCAAATTACGACAGGTGTGACAGTCCAGCTCCATTGATTTTGACTCAAGACGAAGCAGCGCAACTTGAGTATTTGAAAGTGCATGGTTTACCACCCCCTGGAGAAGCCAAACCAGTACCAAAAGATTTGAGATATGGTTGGTGGAGAATAACGGACGTAGACACGTTTCAAGAACTATTGGAGCACCTTCATTCTCGCGGTGTTCGCGAGAAGGAACTAAAACGTACAACGTGGGCGACCATGGAATCTTTCCTAGCTGTTACGGGCAAGATCAACGTGGACCCTGGTAACCTGACTGCTACCGAACTTCAAGCGACACCAGACGAACCTGACACACCGATTCCAAAACCAGACAACCCGGCTGACTGGAGCGAACAAGTCGCATTACGGGTAGATGCGCAACTCTTGGAACAAGTCGAGGCTCTAGAAGATAAAGTCGCAAATGCCAGCATGCAGATCAAAGGCTGGAAGTTACCTCCACGAGCAGGAACCGAAGAGGCAGAAGAAATTGAGAAACTGAACGAAATGGAGAAAATTAGCGCGGTTGAACAAGCTCGACAAAGGTTACTATCCCTGGAAGCGGCTATTGAAAGGAGATACTTGAAACCACCGTTAGGCGTTTGTACTGGAGATCCAAATCTAGCGGCCTTAAAGGCAGAACAAGCGGCCGCTGCGAACGCAAATTCGAATAATTCGGATCAGAGCAATCAGACCCCGATACCTCAAGAAGAAACAACTCCAAGAGGGCTGAACAACTGGCGAGAAGCAACGGCCCGAGCACACACGTCCGCTCAGCTCGCCATGGCGCTTTATATGTTGGAGGCCAGCATCGCATGGGACAAGAGCATCATGAAGGCTAATTGTCAGTTCTGTCATAGCGGAGATAACGAAGACAAACTATTACTGTGTGATGGTTGTGACCGCGGCTATCATACTTATTGTTTCCGTCCAAAAATGGAAAACATTCCTGATGGTGACTGGTATTGTCACGAATGCATGAACAAAGCTACAGGGGAACGAAACTGTTTGGTATGTGGAAAGAGGGTTGGTAAAAATTTAGTGCTATGTGAACTCTGTCCACGGGCTTATCACACTGACTGCCACAATCCTGTTATGCCAAAAATGCCAAGGGGTAAATGGTATTGTTCTAATTGCCACAGTAAACAACCAAAGAAGAGAAATAGTAGTCGAAGGAGTCATACCAAAGGGGCAGGCACCAGAGAAAGTGAAAGTTCTGATCATCCACCAGCTAGTCCAACGCCGTCAACGGCATCGAACACACACGTAGAGGACGTCAGTTCATCGGAACCGGCAACCCCAACTGCTTCGCCACGGAAGGAGGGAAACAATAGGACGCTCACGAAGAAACAGCAACGAGAGTTGGCTCCTTGTAAGGTGCTACTCGAACAGTTGGAGCAACAGGACGAGGCCTGGCCGTTCCTCTTGCCGGTGAACACCAAACAGTTTCCTACCTACAAGAAAATTATTAAAACACCCATGGATCTCAGTACGATCAAGAAGAAATTGCAGGACTCCGTGTACAAGTCTCGCGATGAGTTTTGCGCCGATGTCAGACAGATGTTCATCAACTGCGAGGTATTCAACGAGGATGACAGTCCCGTGGGGAAGGCTGGACACGGGATGCGCAGTTTCTTCGAAATGCGTTGGACCGAGATTACTGGCGCACCACCTCCACACCCACAAACGCATAGCTGA
- Protein Sequence
- MEKENSASGGGGGGGGGGGGEAAATATPGATSASEKLQADQANPLLDPTALFGAYWPRGDSAASSLFGGMPGGYGLGAHHLPSAYAILGRGGSAPGFGGHTPASAPPPPPYSHSSLGTLSVAASQAASLGINPASAAWWTMASHLAAQDYLARLQGAAGLPGFPPGAESLLPPYPASLLNPPSLSSHKSSKSKSSKSHKTPASSSSSTTPSMTGSSLPVSTQAPVTSSHHSTSTSSTPNSQTNVVSDPSSILGGVRLPPDTEIIKYTSSIVGPKVPGTTNRGRKKTISLDTPSVSVHPPPVPALSAHQTNTTTSSLMMEPRKYNRTGTESNDYRESVDRVEVIKLPAHSTNGSALPAPSSYTTTTNASNSNDSDAPLNLSLKPSTTSSSSPISGSQPLSQLSNLSQSLLASDRTSRRKPGPKPRRVPQNSVPVPASPSPSLAQLFAAADSPQRPSSGSEESESASTTHHKDGRPRNLGRGVSKPKKNTVASLLAQSRALGIKPTPTLDPSVPLSHQVSLLRSNILAAQLHATATGQTDDKNQRSLQEKMKNKVLEVSGEESNMDVTSESGSNTDVVTDTDDDNADGVSSAKRRKVKPSERDLQVPLERGWKRETVIKGLGKSGVIKGDVSYYSPCGKTFRSSPDLAKFLEQQNPPDLTTANFSFSSRPLVGEFLQPTMGLAEAEFVRLGAQEVARRLEELRAAGGFRDVRTNNQYEREKLAYAKKLAKEEAQRHKEQARLIKEQEKTERQEAVRREREIRNQQLLEARKKRQEEVEKIRLEEQQRKQQERELKRQQAVMLKEQMYMQELTKQREMLYTVELERERRRQHMALVRALENRRKMEEREKKRLEARAERIATKEKRAEQRKVEMELIEQIRKPVEDMELTDHRPLPELKRLPGLKLSGQAFADIVMVFEFLHNFGETLGFDMESLPSLKSLQLALLNDEEAEEELLSVMTHLLVCAIEDPGIPQPARHTTGLGQSLRQADITHANISEVLRIYLYANATGEVKALTGVCLERERDKKFADHHQNGGDYASTCSGKNAQFYEHLHNNETWKMSERLRDKPFLALNPTHKAQMLGFLCNELLQNKAVIRQIEGSLETVAQLRKERFVLDTKIRKLRQLHSRKVRMEAVGVIVNKTGDTITIEKKEVDEEGNTTSTAVGTTPTPDEIHHEDEVEDMSENESEGTQPEEEEDKNLSGEELGKKLDKLLKQSEEQLQKLNSSSKQLRAHIFGQDRCWRRYWELACAGGIFVEAMESAEPEILELQAELDEKYKNVSMEEKSETKQEDTKVENRENEAPNDVKKEKKFNSSEQEADVKPLADKTKSEIEDVNCKKEPMQNCENLANMKEEKKNDLDSSMTDAKTNVTSEEIKQETEIVSMDVDIKEETKKENDEADEDTKPAVKIMEDKIVETIPNGDKFNHVNNLHNGKELNGTFISNNSNESNWFSILPRETCDTPGPSTKQIFGIAEPTELRIPVFPPPASPNYDRCDSPAPLILTQDEAAQLEYLKVHGLPPPGEAKPVPKDLRYGWWRITDVDTFQELLEHLHSRGVREKELKRTTWATMESFLAVTGKINVDPGNLTATELQATPDEPDTPIPKPDNPADWSEQVALRVDAQLLEQVEALEDKVANASMQIKGWKLPPRAGTEEAEEIEKLNEMEKISAVEQARQRLLSLEAAIERRYLKPPLGVCTGDPNLAALKAEQAAAANANSNNSDQSNQTPIPQEETTPRGLNNWREATARAHTSAQLAMALYMLEASIAWDKSIMKANCQFCHSGDNEDKLLLCDGCDRGYHTYCFRPKMENIPDGDWYCHECMNKATGERNCLVCGKRVGKNLVLCELCPRAYHTDCHNPVMPKMPRGKWYCSNCHSKQPKKRNSSRRSHTKGAGTRESESSDHPPASPTPSTASNTHVEDVSSSEPATPTASPRKEGNNRTLTKKQQRELAPCKVLLEQLEQQDEAWPFLLPVNTKQFPTYKKIIKTPMDLSTIKKKLQDSVYKSRDEFCADVRQMFINCEVFNEDDSPVGKAGHGMRSFFEMRWTEITGAPPPHPQTHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00684165;
- 90% Identity
- iTF_00684165; iTF_00224551; iTF_01514823; iTF_01514155; iTF_00215020; iTF_00760979; iTF_00219797; iTF_00221909; iTF_00141824;
- 80% Identity
- -