Basic Information

Transcription Factor Domain

TF Family: RHD
Domain: RHD domain
PFAM: PF00554
TF Group: Beta-Scaffold Factors
Description: Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1e-15 4.7e-12 46.6 0.1 1 47 67 112 67 113 0.95

2 2 3.8e-23 1.8e-19 70.7 0.1 80 169 111 201 109 201 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1e-15	4.7e-12	46.6	0.1	1	47	67	112	67	113	0.95
2	2	3.8e-23	1.8e-19	70.7	0.1	80	169	111	201	109	201	0.96

Coding Sequence: ATGGTATTCAGAGACGTAAACTGCGATTGTTCTGTCCGCGAGTGTCCACAGCAAAATCACACACGTACTGCGATTTTCCTGACCGAATACGGTGCACCATCCTATCTCTCACATCTGGGTTATCCGCCAGATTCCGCAGATTTTAACTGGAAAGGTCAATTGTCAGTGAAAATGGATATTATAAGGTCATCGTCATATGTTGAAATAATAGAACAACCGGCTAGTAATGATTCGCGCTTTCGTTATAAATGTGAACACAAATCGAATCCTATAAACGGTGTAAACAGTACGCCAGAAAAGAAAACATTTCCTAGTATAAAAATAATTTTATACAGAGTAGAAGTGTCATCAGAAAATATGACAGTCACATTTGTACATTTTAGTATTGAATGTATTAAAAAAAGGGATATTAAGGAGGCACTTAGAATAAGAGAGGAACTTCGCATAGATCCCTTCCAAACTGGCTTCGAACATAAAAAAGACGTTGCTAGTATTGATTTAAATACACTGCAGTTGTGCTTCGAAGTTTTTTTAGAGGGAACACAAATAGGAAAGTTAAATGTACCATTACAACCAGTTGTATCTAACCTTATATTTGATAAAAGGATAGTGTTAAATCCTTTAATATACGAGCTCAGTCACTCTAATGCGTCGGTCGCTGGTGGTACGAAAATGATTTTATTATGCGAGAAGATGATAAAGAATGATATACAAATTAGATTTTTCGAGAAGAAGGACGGGCGAGTGGTTTGGGAAGGATTCGGTGATTTTGAACCTGATAATGTATATAAACAAACAGCAATAGTATTCAGAACACCAGCATATAACATGCAATGA
Protein Sequence: MVFRDVNCDCSVRECPQQNHTRTAIFLTEYGAPSYLSHLGYPPDSADFNWKGQLSVKMDIIRSSSYVEIIEQPASNDSRFRYKCEHKSNPINGVNSTPEKKTFPSIKIILYRVEVSSENMTVTFVHFSIECIKKRDIKEALRIREELRIDPFQTGFEHKKDVASIDLNTLQLCFEVFLEGTQIGKLNVPLQPVVSNLIFDKRIVLNPLIYELSHSNASVAGGTKMILLCEKMIKNDIQIRFFEKKDGRVVWEGFGDFEPDNVYKQTAIVFRTPAYNMQ

Sequence clustering based on sequence similarity using MMseqs2