Basic Information

Insect: Bombus picipes
Gene Symbol: stc
Assembly: GCA_014737485.1
Location: JACXIP010000033.1:133903-138684[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.1e+04 -4.4 1.6 15 19 565 569 564 569 0.81

2 13 0.17 1.7e+03 -0.7 0.3 4 10 598 604 597 604 0.94

3 13 2.6e-05 0.27 11.5 14.9 4 19 615 630 613 630 0.93

4 13 2.8e-07 0.0029 17.8 16.4 1 18 666 683 666 684 0.97

5 13 2.5e-08 0.00026 21.1 11.1 1 19 722 740 722 740 0.98

6 13 2.4e-06 0.025 14.8 11.7 4 18 787 801 780 802 0.86

7 13 2 2.1e+04 -4.7 1.6 5 10 831 836 831 836 0.90

8 13 0.00059 6.1 7.2 8.4 1 11 842 852 842 853 0.97

9 13 2e-10 2.1e-06 27.8 13.8 1 19 869 887 869 887 0.98

10 13 0.51 5.3e+03 -2.2 0.6 5 10 915 920 915 921 0.89

11 13 2 2.1e+04 -8.4 11.4 10 19 934 944 923 944 0.77

12 13 2.2e-07 0.0023 18.1 11.9 1 16 980 995 980 1006 0.85

13 13 8.1e-06 0.084 13.1 13.6 1 19 1012 1031 1012 1031 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.1e+04	-4.4	1.6	15	19	565	569	564	569	0.81
2	13	0.17	1.7e+03	-0.7	0.3	4	10	598	604	597	604	0.94
3	13	2.6e-05	0.27	11.5	14.9	4	19	615	630	613	630	0.93
4	13	2.8e-07	0.0029	17.8	16.4	1	18	666	683	666	684	0.97
5	13	2.5e-08	0.00026	21.1	11.1	1	19	722	740	722	740	0.98
6	13	2.4e-06	0.025	14.8	11.7	4	18	787	801	780	802	0.86
7	13	2	2.1e+04	-4.7	1.6	5	10	831	836	831	836	0.90
8	13	0.00059	6.1	7.2	8.4	1	11	842	852	842	853	0.97
9	13	2e-10	2.1e-06	27.8	13.8	1	19	869	887	869	887	0.98
10	13	0.51	5.3e+03	-2.2	0.6	5	10	915	920	915	921	0.89
11	13	2	2.1e+04	-8.4	11.4	10	19	934	944	923	944	0.77
12	13	2.2e-07	0.0023	18.1	11.9	1	16	980	995	980	1006	0.85
13	13	8.1e-06	0.084	13.1	13.6	1	19	1012	1031	1012	1031	0.97

Sequence Information

Coding Sequence: ATGGCTACTTGGGATGGTTCTTATTCAGGGCCAGATGACCAAAATTATTGTCAAATGTATTCTGATCAAAGCGTACCTGGGCCTGCAACAGGAAATTGGACATTATTTTCTGATGATATAAATAACGATTATTTGCAACCTAGTCGTGAGTTCTATGTACAAAATGAACCTATATTTGAACAGAATAGTCCGAATGCTTTCTATCATTCGAACACCAATGTTATGCCAAGTTTGTTGACTACAACCAATAATTATCATGGGCATGTAATAAACCCAGTAGGAAATACACAAGTATTAAATAGTGAGGAGTACTTTCCAACTGTTGTCAAATCTCAACAAGGCCACGTATCTGATGACTCTTGGAAATATGATAGCAATGTAATGAAGAACGAAGATAAATATGCCTCTACAAAGAGAATTAAGGAATCTTCAGGCAGCATAGTCAATCACTCAAAGCTACATGTCATGGCTGAAGAGTTTGTGCCAAATAATAGAGGATATGGTGATAGAAGTAAAAACAAAGAGTTAGAGAATACAAAATCTACTAATGATGCAAATTATTGTGTCAAGGATAACGGCAAGATATCAGATAAATACTTCTTTTGTAATGAGAATAGGCATGAAGGTAAATATAATAACAAAAAATGTTCTAATTATAAGCACAAAGAAAGACATCAAGATCAGTGTTACAAAAAAAATGCATATACAAATTCCTATCAACAGCATGTCAAAACTTCTCATAAACTTCAAGGTAATAAATACTTTACTAATAAGTATTATGCAGGAAAATCACAAGTAAATTCAAAAGTTATAAATGAAAATGCATTGGATCAATGTTCAATGGCTAACAGTGCTACTTGTAATAATAAAAAGGATCCTGTAATAAATTTGAATAAAGGAGAATCATCATTAAGTATGAATGTATGTTCAAATAAAAATAAAAATTTGTCGAATGAGGTTAATGATAAAAGAACTATCATTGGTGATAATAATGTTGTACAGGGTGATAGCATACAGCAGCCCAAAAATTCGACGAAGGAATTTACTTACTATAATCCTGGTTTCAAACAGACCTACAATAATCATAGAAATTTAAGGAAATATCAGTATAATGATAGATATAACAGGGAAGAAAATTTTTATAAAGAAAAGCGACATCACTATCCAGGATATGGTAGAGAAAATTATAATAAAGTAGATAAAATTAAAATAAGAAATGAAATGTGCAGTAATGGAGAATATAACGAATATAAAGAATGTTTTAACGAGAGAACTGGATTAGAAGCAAAAGAGATAAAAGAGAAAAGGCACAACTATCAAGGATATAATGGATTTAAAGAACATCATAAGGAAGCTAAACTAGAAATCTTTAAAGAGAAAGATAAAGGTAAATACTATGTATCTGAAAATAAAGAGAAAGGAAATGAACATTGGCGAAATAAAAGGGAAATTACCGAAAGAAATAATATTCAGAAACGGGGACAAAATAGAAAGTCACCAGTTGATGATGATGCAAGTCAAAGAGAAAGACTAGCAGAACAGTTGAATAGAGGACAATTAGAATGTTTAGTATGTTGTGAATATATTAAACAGAACGATTATGTTTGGTCATGTTCTAACTGCTATCATGTGTTGCATCTGAAATGTATTAAGAAATGGGCAAAGTCATCACAATCTGAAAATGGCTGGAGGTGTCCAGCATGTCAAAATGTTAACTTAGTAATTCCTGAAGATTACTTTTGCTTTTGTGGCAAAACAAGAGTACCTGAATGGAATCGTAGAGATGTTGCACATTCTTGTGGTGAAATTTGCGCTAGAACATTATCCAAAAATAGTTGTCCACATAAGTGCACTCTTCTATGCCATCCTGGATCTTGTCCACAATGTACAGCAATGGTAACAAAATATTGTGGCTGCGGTAAAACTCAGCAAACAGTACAGTGTAGCACTCAGAAATTATTGCTGTGCGAGTCTATATGTGGTAAAAACTTAAAATGTGGCAGGCATAAATGTCAAAGTAAATGCCATCATGGAGAATGTGCAAATTGTGAAGAAACAATAACGCAAAAGTGTTATTGTGGCAAAAGTACAAAAGAAATTACTTGCCAGAGTAATATTTCGTTCACATATTCTTGTGGAACTATTTGCGGAAAATTGTTAGAATGTGGTAATCACACTTGTACAAAATTGTGTCATGCGGACCCTTGCGAATCCTGTTCTTTAACTCCTGACAAAATTACAACTTGCTGCTGTGGGCAAACACCATTAATAGATAAGAGACAAACTTGCTTAGATTCAATCCCAATCTGTGACAAAATATGCTTGAAAAATTTGAAATGCGGGCAGCCTAATAATCCTCATAAGTGTAAAGTGAAGTGTCATGTAGGGGATTGTCCTGTTTGTGACTTAATTACCAATGTTAGATGCCGCTGCGGAAACATGGATAGGGAAATAGCTTGTAAAGATTTAATATCAAAAGCTGATGATGCACGGTGTGAAAAGAGATGTACAAAAAAAAGGTCTTGTGGGAAGCACAAATGTAACCAACTGTGTTGTATAGAGATAGAACATATTTGTCCATTAATATGTTCTAAAACTTTAAGCTGTGGGAGGCATAAATGTGAACAAAGCTGTCATAAAGGAAGGTGTCAACCTTGTTGGCGAAGTAGTTTTGATGAATTATATTGTGAATGCGGGGCTTCTGTGATATATCCTCCTGTTCCTTGTGGGACAAGAAGACCTACATGCGACAGACCTTGCTCTCGACAGCACTCTTGTGGCCACGAAATATTACATAATTGCCATAGTGAATTAAACTGTCCGCCTTGTACTGTTCTTACTCAAAGATGGTGTCATGGCAAACATGAGTTACGAAAAGCTGTACCATGCTATGTTAGCGAAATTTCATGTGGTTTGTCATGTAACAAGCCCATATCCTGTGGCCGACATAGATGCATTACTATTTGTCATTCTGGACCATGTGAAAAACCAGGACAACAATGTTCTCAGCCTTGTACTGTTCAAAGGGAACTGTGTGGACACATCTGTGCTGCTCCGTGTCACGAGGGTAAATGTCCAGACACACCTTGCAAGGAGATGGTTAAGGTGACGTGTCAGTGTGGGCATAGGACCATGTCGCGTGTTTGCGCCGAAAATTCTAAAGAATATCAGAGGATAGCAAGTAGCATATTAGCTAGTAAAATGGCTGATATGCAATTAGGTCATTCTATTAATTTGGAAGAAGTATTTGGTCAAGGAGCAAAGAAGCAGAATCAGTTAAAAACTTTAGAATGCAATGATGAATGTAAAATAATAGAACGGAATAGAAGATTGGCGTTGGGTTTGCAAATTGTAAATCCAGATTTAAGTGGAAAATTAATGCCTAGATACAGTGATTTTATGAAGCAGTGGGCTAAAAAGGATCCTCATTTTTGTCAGATGGTTCATGACAAATTAACCGAGTTGGTTCAATTGGCAAAAACCTCTAAACAAAAATCACGCAGTTATTCCTTTGATAGCATGAACAAAGATAAACGTCATTTTATTCACGAGTCTTGTGAACATTTTGGTTGTGAAAGCCAGGCGTATGATCAGGAGCCAAAAAGAAATGTTGTTGCGACTGCTGTAAAAGATAAGTGTTGGTTACCTAGTTATAGTTTATTAGAGATTGTACAACGGGAAAATGGTCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAAGCTGATGGGTCCGTGAAGACAATATTATCACTGCCTGCGAAAAAGATCCAAAAGCCAGAAACAACATTAAGCATAAAAACATCAGAACCAGAAATAGATTATTTTGATTATAAGGGTTAA
Protein Sequence: MATWDGSYSGPDDQNYCQMYSDQSVPGPATGNWTLFSDDINNDYLQPSREFYVQNEPIFEQNSPNAFYHSNTNVMPSLLTTTNNYHGHVINPVGNTQVLNSEEYFPTVVKSQQGHVSDDSWKYDSNVMKNEDKYASTKRIKESSGSIVNHSKLHVMAEEFVPNNRGYGDRSKNKELENTKSTNDANYCVKDNGKISDKYFFCNENRHEGKYNNKKCSNYKHKERHQDQCYKKNAYTNSYQQHVKTSHKLQGNKYFTNKYYAGKSQVNSKVINENALDQCSMANSATCNNKKDPVINLNKGESSLSMNVCSNKNKNLSNEVNDKRTIIGDNNVVQGDSIQQPKNSTKEFTYYNPGFKQTYNNHRNLRKYQYNDRYNREENFYKEKRHHYPGYGRENYNKVDKIKIRNEMCSNGEYNEYKECFNERTGLEAKEIKEKRHNYQGYNGFKEHHKEAKLEIFKEKDKGKYYVSENKEKGNEHWRNKREITERNNIQKRGQNRKSPVDDDASQRERLAEQLNRGQLECLVCCEYIKQNDYVWSCSNCYHVLHLKCIKKWAKSSQSENGWRCPACQNVNLVIPEDYFCFCGKTRVPEWNRRDVAHSCGEICARTLSKNSCPHKCTLLCHPGSCPQCTAMVTKYCGCGKTQQTVQCSTQKLLLCESICGKNLKCGRHKCQSKCHHGECANCEETITQKCYCGKSTKEITCQSNISFTYSCGTICGKLLECGNHTCTKLCHADPCESCSLTPDKITTCCCGQTPLIDKRQTCLDSIPICDKICLKNLKCGQPNNPHKCKVKCHVGDCPVCDLITNVRCRCGNMDREIACKDLISKADDARCEKRCTKKRSCGKHKCNQLCCIEIEHICPLICSKTLSCGRHKCEQSCHKGRCQPCWRSSFDELYCECGASVIYPPVPCGTRRPTCDRPCSRQHSCGHEILHNCHSELNCPPCTVLTQRWCHGKHELRKAVPCYVSEISCGLSCNKPISCGRHRCITICHSGPCEKPGQQCSQPCTVQRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSINLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKADGSVKTILSLPAKKIQKPETTLSIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00217441;
90% Identity: iTF_00217441;
80% Identity: -