Bpas021378.1
Basic Information
- Insect
- Bombus pascuorum
- Gene Symbol
- Bgb
- Assembly
- GCA_905332965.1
- Location
- HG995272.1:17458983-17470003[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-82 4.3e-78 261.0 0.5 1 163 39 198 39 201 0.97
Sequence Information
- Coding Sequence
- ATGATGCACACTATGAGCGAACACACAGCTGGGGCTGGAGGACTGGGTGTAAGCGTGCTTCCCTTTGATGGCATGGGTCTATTTGAACAACAACGACCCAGATTCCTCTTCAAGATGCCCAAAGTTGTGCCGAATCAAAAGGCCAAATTCGAAACGGAGGAATTGTTCAGGAGATTGAGTCGTGAAAGCGAGGTCAGGTATACTGGATATCGAGACAGGCCAATTGAGGAACGACAGGTACGTTTCCAAAATGGCTGTCGGGAAGGTTACACGGAGATCGCGTTCGCCGCAACTGGAACAAACCTCCAGCTCGTTTTTGGCAACGCATCTGGAAATTACGGTGGTGACATCAACGACTGCGATTTTGAAAAAGAACGCGGCAAGGTACATCTCAGGTCTCGCTTAATCATGAACGGTGTGTGCGTGATGTGGCGTGGTTGGATAGACCTAGAGAGGTTGGACGGCGTTGGATGTCTGGAATACGACGAGAAACGCGCCGCTGAAGAAGACGCTCTTCTTCGCGACCAATTAGAACGTTATAACCAACGAGTACGCGATTTCGACGAGAAACAAAGAGCGTACAGAAGCGGAGCTACTCAACCACCTCATTTGAATCATCATCACCATCACCACCATCATCACCACGGTCATCACAGCCACCACGTGGCCGGAAGTGGCTCTGGAACCAGCGGAACAATCGAGCCTCATCTCACCCACCGACAAGATCCCGAGATGGAAGTCAGATTGAGGGCCTACTGA
- Protein Sequence
- MMHTMSEHTAGAGGLGVSVLPFDGMGLFEQQRPRFLFKMPKVVPNQKAKFETEELFRRLSRESEVRYTGYRDRPIEERQVRFQNGCREGYTEIAFAATGTNLQLVFGNASGNYGGDINDCDFEKERGKVHLRSRLIMNGVCVMWRGWIDLERLDGVGCLEYDEKRAAEEDALLRDQLERYNQRVRDFDEKQRAYRSGATQPPHLNHHHHHHHHHHGHHSHHVAGSGSGTSGTIEPHLTHRQDPEMEVRLRAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00227043;
- 90% Identity
- iTF_00217520;
- 80% Identity
- iTF_00222960; iTF_00223642;