Basic Information

Insect: Bombus opulentus
Gene Symbol: stc
Assembly: GCA_034509555.1
Location: CM067419.1:15627321-15632068[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3 2e+04 -4.4 1.6 15 19 564 568 563 568 0.81

2 12 0.25 1.6e+03 -0.7 0.3 4 10 597 603 596 603 0.94

3 12 3.9e-05 0.26 11.5 14.9 4 19 614 629 612 629 0.93

4 12 4.2e-07 0.0028 17.8 16.4 1 18 665 682 665 683 0.97

5 12 5.2e-08 0.00034 20.7 9.2 1 19 721 739 721 739 0.98

6 12 2e-05 0.13 12.4 11.5 4 18 786 800 779 801 0.86

7 12 0.0006 3.9 7.7 8.3 1 11 841 851 841 852 0.95

8 12 3e-10 2e-06 27.8 13.8 1 19 868 886 868 886 0.98

9 12 0.77 5.1e+03 -2.2 0.6 5 10 914 919 914 920 0.89

10 12 3 2e+04 -8.4 11.4 10 19 933 943 922 943 0.77

11 12 3.4e-07 0.0022 18.1 12.3 1 16 979 994 979 1005 0.85

12 12 1.2e-05 0.08 13.1 13.6 1 19 1011 1030 1011 1030 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3	2e+04	-4.4	1.6	15	19	564	568	563	568	0.81
2	12	0.25	1.6e+03	-0.7	0.3	4	10	597	603	596	603	0.94
3	12	3.9e-05	0.26	11.5	14.9	4	19	614	629	612	629	0.93
4	12	4.2e-07	0.0028	17.8	16.4	1	18	665	682	665	683	0.97
5	12	5.2e-08	0.00034	20.7	9.2	1	19	721	739	721	739	0.98
6	12	2e-05	0.13	12.4	11.5	4	18	786	800	779	801	0.86
7	12	0.0006	3.9	7.7	8.3	1	11	841	851	841	852	0.95
8	12	3e-10	2e-06	27.8	13.8	1	19	868	886	868	886	0.98
9	12	0.77	5.1e+03	-2.2	0.6	5	10	914	919	914	920	0.89
10	12	3	2e+04	-8.4	11.4	10	19	933	943	922	943	0.77
11	12	3.4e-07	0.0022	18.1	12.3	1	16	979	994	979	1005	0.85
12	12	1.2e-05	0.08	13.1	13.6	1	19	1011	1030	1011	1030	0.97

Sequence Information

Coding Sequence: ATGGCTACTTGGGATGGTTCTTATTCAGGACCAGATGACCAAAATTATTGTCAAATGTATTCTGATCAAAGCGTACCCGGGCCTGCAACAGGAAATTGGAcattattttctgataatatAAATGACGATTATTTACAACCTAGTCGTGAGTTCTATGTACAAAATGAACCTACGTTTGAACAGAATAGTCCAAATGCTTTCTATCATTCGAACACGAATGTTATGCCAAGTTTGTTGACTACAACCAATAATTATCATGGGCATGTAATAAACCCCGTAGGAAATACACAAGTATTAAATAGCGAGGAGTATTTTCCAACTGTTGTCAAATCTCAACAAGGCTGCGTATCTGATGACTCTTGGAAATATGATAACAATCTAATGAAGAACGAAGATAAATATGTCTCTACAAAGAGAATTAAGGAGTCTTCAGGCAGCATAGTCAATCAATCAAAATTACATGTCATGGCTGAAGAGTTTGTGCCAAATAATAGAGGATATGGCgatagaagtaaaaataaagagtTAGAGAATACAAGATCTACTAACGATGCAAATTATTGTGTCAAGGATGATGGCAAGATATCAGATAAATACTTCTTTTGTAACGATAGTAGGCATGAaggtaaatataataacaaaaaatgttcTAATTATAAACACAAAGAAAGACAGCAAGATCAGTGTTACAAAAAAAATGGATACACAAATTCCTATCAACAGCATGTCAAAACTTCTCATAAACTTCAAGgtaataaatactttactAATAAGTATTATGCAGGAAAATCACAAGTAAATTCAAAAGCTATGAATGAAAATGCATTGGATCAATGTTCGATGACTAATAGTGCTACTTGTAATGATAAAAAGGATCctgtaataaatttgaataaaggAGAATCGTCATTAAGTACGAATGtatgttcaaataaaaataaaaatttgtcgaatGAGGTTAGTGATAAAAGAACTATCATTGGTGATAATAATGTACAAGGTGATAGCATACAGCAGCCCAAAAATTCGATGAAGGAATTTACTTACTATAATCCTGGCTTCAAACAGACCTACAATAATCATAGAAATTTAAGGAAATATCAGTATAATGATAGATATAACagggaagaaaatttttataaagaaaagcgACATCGCTATCCAGGATACGgtagagaaaattataataaagaagataaatttaaaataagaaatgaaatgtgCAGTAACGGAGGATGTAACGAATATaaagaatgttttaacgaGAGAACTGGTTTAGAGGcaaaagagataaaagagaaaaggcaCAACCATCAAGGATATAATGGATTTAAAGAATATCATAAGGAAGCTAAACTAGATATCtttaaagagaaagataaaggtaaatattatgtatctgaaaataaagagaaaggatATGAACATTGGAGGAATAAAAGGGAAATtagcgaaagaaataatattcagaaaCGGGGACAAAATAGAAAGTCACCAGTTGATGATGATGCAAGTCAAAGAGAAAGACTAGCAGAACAGTTGAATAGAGGACAATTAGAATGTTTAGTATGTTGTGAATACATTAAACAGAATGATTATGTTTGGTCATGTTCTAACTGCTATCATGTGTTGCAtctaaaatgtattaaaaaatgggCAAAGTCATCGCAATCcgAAAATGGCTGGAGATGTCCAGCATGTCAAAATGTTAACTTAGTAATTCCTGAAGATTACTTTTGCTTTTGTGGCAAAACAAGAGTACCTGAATGGAATCGTAGAGATGTTGCACATTCTTGTGGTGAAATTTGCGCTAGAACATTATCTAAAAATAGTTGTCCACATAAGTGCACTCTCCTATGCCATCCTGGATCTTGTCCACAATGTACAGCAATGGTAACAAAATATTGTGGCTGTGGTAAAACTCAGCAAACACTACAGTGTAGTACTCAGAAATTGTTGCTGTGTGAATCTATATgtggtaaaaatttaaaatgtggCAGGCATAAATGTCAAAGTAAATGCCATCATGGAGAATGTGCAAACTGTGAGGAAACAATAAAGCAAAcgTGTTATTGTGGCAAaagtacaaaagaaataacttGTCAGAGTAATATTTCGTTCACATATTCTTGTGGAACTGTTTGCGGTAAATTGTTGGAATGTGGTAATCACACTTGTACAAAATTATGTCACGCGGATGCTTGCGAATCCTGTTCTTTAACTCCTGACAAAATTACAACTTGCTGCTGTGGTCAAACACCATTAATAGATAAGAGACAAACTTGTTTAGATTCTATTCCAGTCTGTGACAAAatctgtttgaaaaatttgaaatgcgGGCAACCTAATAATCCTCATAAGTGTAAAGTGAAGTGTCATATAGGGGATTGTCCTGTTTGTGACTTAATTACCAATGTTAGATGCCGCTGCGGTAACATGGATAGGGAAATAGCTTGTAAAGATTTGATATCAAAAGCTGATGATGCACGGTGTGAAAAgagatgtataaaaaaaagatcttGTGGGAAGCACAAATGTAACCAACTGTGTTGTGTAGAGGTAGAACATATTTGTCCATTAATATGTTCTAAAACTTTAAGCTGTGGGAGGCATAAATGTGAACAAAGTTGTCATAAAGgaAGGTGTCAACCTTGTTGGCGAAGTAGTTTTGATGAATTATACTGTGAATGCGGGGCTTCTGTGATATATCCTCCCGTTCCTTGTGGGACAAGAAGACCTACATGTGACAGGCCTTGCTCTCGACAGCACTCTTGTGGCCacgaaatattacataattgcCATAGCGAATTAAACTGTCCGCCCTGTACTGTTCTTACTCAAAGATGGTGTCATGGCAAACACGAATTAAGAAAAGCTGTACCATGCTATGTTAACGAAATATCATGTGGTTTGTCATGTAACAAGCCCATATCCTGTGGTCGACACAAATGCATTACTATTTGTCATTCTGGACCATGCGAAAAACCAGGACAACAATGTTCTCAGCCTTGTACTGCTCAAAGGGAACTGTGTGGACATATCTGTGCTGCTCCATGTCACGAGGGTAAATGTCCAGACACACCTTGCAAGGAGATGGTTaagGTGACGTGTCAGTGTGGGCATAGGACTATGTCGCGTGTTTGCGTCGAAAATTCTAAAGAATATCAGAGAATAGCAAGTAGCATATTAGCTAGTAAAATGGCTGATATGCAATTAGGTCATTCTATTAATTTGGAAGAAGTATTTGGTCAAGGAGCAAAGAAGCAGAATCAGTTAAAAACTTTAGAATGCAACgatgaatgtaaaataatagaacGGAATAGAAGATTGGCGTTGGGTTTGCAAATTGCAAATCCAGATTTAAGTGGAAAATTAATGCCTAGATATAGCGATTTTATGAAACAGTGGGCTAAAAAGGATCCTCATTTTTGTCAGATGGTTCATGACAAATTAACCGAGTTGGTACAATTAGCAAAAACATCTAAACAGAAATCACGCAGTTATTCCTTTGACAGCATGAACAAAGATAAACGTCATTTTATTCACGAGTCTTGTGAACATTTTGGTTGTGAAAGCCAGGCATATGATCAGGAGCCAAAAAGAAATGTTGTTGCGACTGCTGTAAAAGATAAGtgTTGGTTACCTAGTTATAGTTTATTAGAGATTGTACAACGGGAAAATGGTCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAAGCTGATGGGTCCACGAAGACAATATTATCACTGCCTGCGAAAAAGATGCAAAAGCCAGAAACAACATTAAGTATAAAAACATCAGAACCAGAAATagattattttgattataagGGTTAA
Protein Sequence: MATWDGSYSGPDDQNYCQMYSDQSVPGPATGNWTLFSDNINDDYLQPSREFYVQNEPTFEQNSPNAFYHSNTNVMPSLLTTTNNYHGHVINPVGNTQVLNSEEYFPTVVKSQQGCVSDDSWKYDNNLMKNEDKYVSTKRIKESSGSIVNQSKLHVMAEEFVPNNRGYGDRSKNKELENTRSTNDANYCVKDDGKISDKYFFCNDSRHEGKYNNKKCSNYKHKERQQDQCYKKNGYTNSYQQHVKTSHKLQGNKYFTNKYYAGKSQVNSKAMNENALDQCSMTNSATCNDKKDPVINLNKGESSLSTNVCSNKNKNLSNEVSDKRTIIGDNNVQGDSIQQPKNSMKEFTYYNPGFKQTYNNHRNLRKYQYNDRYNREENFYKEKRHRYPGYGRENYNKEDKFKIRNEMCSNGGCNEYKECFNERTGLEAKEIKEKRHNHQGYNGFKEYHKEAKLDIFKEKDKGKYYVSENKEKGYEHWRNKREISERNNIQKRGQNRKSPVDDDASQRERLAEQLNRGQLECLVCCEYIKQNDYVWSCSNCYHVLHLKCIKKWAKSSQSENGWRCPACQNVNLVIPEDYFCFCGKTRVPEWNRRDVAHSCGEICARTLSKNSCPHKCTLLCHPGSCPQCTAMVTKYCGCGKTQQTLQCSTQKLLLCESICGKNLKCGRHKCQSKCHHGECANCEETIKQTCYCGKSTKEITCQSNISFTYSCGTVCGKLLECGNHTCTKLCHADACESCSLTPDKITTCCCGQTPLIDKRQTCLDSIPVCDKICLKNLKCGQPNNPHKCKVKCHIGDCPVCDLITNVRCRCGNMDREIACKDLISKADDARCEKRCIKKRSCGKHKCNQLCCVEVEHICPLICSKTLSCGRHKCEQSCHKGRCQPCWRSSFDELYCECGASVIYPPVPCGTRRPTCDRPCSRQHSCGHEILHNCHSELNCPPCTVLTQRWCHGKHELRKAVPCYVNEISCGLSCNKPISCGRHKCITICHSGPCEKPGQQCSQPCTAQRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCVENSKEYQRIASSILASKMADMQLGHSINLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKADGSTKTILSLPAKKMQKPETTLSIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00217441;
90% Identity: iTF_00217441;
80% Identity: -