Basic Information

Insect: Bombus opulentus
Gene Symbol: -
Assembly: GCA_034509555.1
Location: CM067410.1:11116104-11120313[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3 7.5e+03 -2.8 4.4 6 43 233 265 231 266 0.66

2 16 6.5 1.6e+04 -3.8 1.0 18 27 387 396 384 408 0.63

3 16 0.59 1.5e+03 -0.5 0.2 18 29 466 477 462 484 0.79

4 16 0.24 5.8e+02 0.8 2.2 12 26 493 507 479 522 0.75

5 16 7.2 1.8e+04 -4.0 0.0 14 26 593 605 590 608 0.73

6 16 4.3 1.1e+04 -3.3 0.1 15 28 622 635 616 637 0.75

7 16 4.7e-06 0.012 15.8 0.8 14 44 686 713 681 713 0.91

8 16 0.021 53 4.1 5.1 14 44 716 743 712 743 0.79

9 16 0.96 2.4e+03 -1.2 1.8 13 26 746 759 737 774 0.71

10 16 0.47 1.2e+03 -0.2 0.1 19 27 782 790 779 798 0.84

11 16 0.0085 21 5.4 0.0 12 43 852 880 843 881 0.83

12 16 0.02 49 4.2 0.5 18 38 932 949 922 954 0.82

13 16 0.024 59 3.9 0.5 18 37 976 992 969 995 0.79

14 16 0.95 2.3e+03 -1.2 0.1 14 27 1046 1059 1040 1068 0.81

15 16 5.5e-07 0.0013 18.8 0.3 11 44 1095 1125 1083 1125 0.88

16 16 2.1 5.1e+03 -2.3 1.2 8 42 1153 1182 1148 1184 0.61

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3	7.5e+03	-2.8	4.4	6	43	233	265	231	266	0.66
2	16	6.5	1.6e+04	-3.8	1.0	18	27	387	396	384	408	0.63
3	16	0.59	1.5e+03	-0.5	0.2	18	29	466	477	462	484	0.79
4	16	0.24	5.8e+02	0.8	2.2	12	26	493	507	479	522	0.75
5	16	7.2	1.8e+04	-4.0	0.0	14	26	593	605	590	608	0.73
6	16	4.3	1.1e+04	-3.3	0.1	15	28	622	635	616	637	0.75
7	16	4.7e-06	0.012	15.8	0.8	14	44	686	713	681	713	0.91
8	16	0.021	53	4.1	5.1	14	44	716	743	712	743	0.79
9	16	0.96	2.4e+03	-1.2	1.8	13	26	746	759	737	774	0.71
10	16	0.47	1.2e+03	-0.2	0.1	19	27	782	790	779	798	0.84
11	16	0.0085	21	5.4	0.0	12	43	852	880	843	881	0.83
12	16	0.02	49	4.2	0.5	18	38	932	949	922	954	0.82
13	16	0.024	59	3.9	0.5	18	37	976	992	969	995	0.79
14	16	0.95	2.3e+03	-1.2	0.1	14	27	1046	1059	1040	1068	0.81
15	16	5.5e-07	0.0013	18.8	0.3	11	44	1095	1125	1083	1125	0.88
16	16	2.1	5.1e+03	-2.3	1.2	8	42	1153	1182	1148	1184	0.61

Sequence Information

Coding Sequence: ATGGACGAGGTGGTGGAGTTGCAGAATATGGAAGATGTGTGTAGACTCTGCCTGTCCACCGATGAGCCAAAATTGTCGGTGTTCGAAACGGAAGACTCTCCGGTGCCCATAGCCAACAAGATACAAGCTTGTCTATCGATTCAGattttaataacggataaattatcaacaaaaatatgtgtgcaatgtattaaaaatgtgaatGACTGGCATAATTACAAGGAAACATGTTTGCGTTCACAAGACAAGTTGCATCGGTGGTTGGAACAACACATGCAACCAAATCCAATGGTTATAACTATTAAGAATGAACCTGTTGATTTTGACTTTTGCGAAGACAATGTTGAGGTTATTTCTGAATCTACCAATGATTCTGATTTGGAAGCCACTAatcttgaagaaaataataaacctttagaaattaatgatcAAGGTCAGCAATTACCTGATGATGACGTAGCTTTAGACAGAGATCAACCAGCTTTAACGAAAGATAtggatatttgtataaaatctGAACCACAAGACGATTATGATACAGATTGTACTATAGAAATTGAATCTGTTACTGGTAGTGAACTTGTTTTGAATCCCCTTTCAAGCTCAGAGGATAGGATTATGGAAGCTGATTCCACTCAGAAATCCAACGCATCCACATCTGCAAGCAAGAAAAAAGTCAGGAGAGGTCCGCACACCCATTTTAGGGGCGCACGTGTTTTTAAACAGAAATGTGTACATTGtcaaattaatttgcattctAAGTATTCTTATGCAAAGCATATGGAAAGATTTCATAGTGACAAACAGAATGGTAGTGTTAATCAATTGGAATTGGAAGATGAGGAAGAGCTTGTTGAAGATTTGGAAGATGAATTAATGAGCATGGAGAAGGATGCTCCATTGACACAAGTGcagcaaaatattataagtcAATTGAAGACATATTCATGTTACTCTTGTGAACAAAGTTTCAGCGATCGTAGAAGTACTCTTTTCCACATTCGTCAGCATATGCCCGATCTAAGACCGCACACGTGTATCGCGTGTTTGACGGAGTttccggatcgatcgatgTATAAAGTACATTGTAGAGCATCGTTCGAGTGTGCAATGAAGATTGCTCTCGTTGTACCAAAACAAGGCTTGCAGAAATGCTTCACATGCAATATGTGTTTACGTTCTCTGCCGGATAGAAAGCAGCTGCTTACTCATCTATCAAAACATTCAGATAAACAGTATGAGGAACTGGTATCTCCAACACGATCTCCACCTAAATTAAAACCAGTAACTCCTCTGCCATCTTTGAGACAGGAGTCACCGAAAAAGTCGCTTAAAGGAAATCATACTATGAACATACCCAGCCCTTACAAAAATGGTGATCCTGCACACAATCATGAATGCGACCTGTGCGGTATGATTTACAGGTACAAGCCAAACATGCTGAAGCATAGAGACCTGTGTCAACGTTTATCATCCGACGCCAGAACATCCTACAGATGTGTCCATTGTGGCATGACATATTTGGTgttcaaaaagtttcattctCATCTAACAGTGGACCATAAAAAGAGTGATTTCATATGTTCTGAATGTGGCAGCAAATTCAAATCTCCTAGTGATTATTTGGAGCATCACAAAGAGCACTCTAATAATCTTAACAAGGAAGGAACTTCTGAATCGAAAAGCAATATACTAAAGGTTACGCAGAACATTTCAAAGCCCATCAAGGATTGGGATACGTTTGAAGCTGAAGTGAATGCTGGTAAACTATCAGACAGTAATCAGTATAGCTGTGCCCTCTGTAATTTGGAATTCACTACTAGAGCTGAACTAATGGAACACAGGAATCTTCATCTGAAAGTGAAGATCTATTCTTGTGTCATCTGTCGTAGTATGTTCAGCAGCGCAGGTGCTTTAGAAATTCATATGAAAGATCATGGTATAGAAGATccgaatgaaagaaatgcaAACATCTCCTGCGTGGAGTATGGTGCGGTACAAGAAGATTCACAGGACTCAAATTCAGTAAATGTCAGCGCCACCTCGGATCCTGGTGATAAAAAGAACGTATGCGATGAGTGCGGCAAGATATTCTCGAATAGCGCTAATCTTAAGAGGCATATCAGAAATATTCACAATGTTATCAGAGGCAACATCATCTGCACTCACTGTCGGCGAACGTTCAAGAGTAAAGAGTCGCATGACCGACACTTAGCAACTGATCACCCAAAGATTGCGAAGTCCATACATCAGTGTTCTAAATGTCGAAAGACTTTCTTCTTCAGAGCTAACCTAAATCTTCATTTTGAAACTGCCCATGCTCAGGAATTAGGTGGTCATGGATGCGACATTTGCGGTAAGATTTTCATGGAAGAATCATCTCTAAAGATACACAGGAGCTGGCACAATCGAGCAAACTCTAGATTGAGTTTACGATTTATGAAGAAAGATGTCCAAAAGCCATTAACCCAGACTAAACAAgaggaatttttcaattccagTATGAACCGACCAGCTAGAGCACGAAAATCTTACCCAAATTTACCTCCAGAAAAGCCAAATGGTAATTTCCAATGTCAAGTTTGCAGTGACAAGTTCAATGATGTAACAGAATTGAGGACACACTTATGGGATGTGCACTGTGCTCGCAATAAAGCTGAGAAGAGCTTTTCAGGTGACGAGTTTCAATGTGAGCTTTGCACAAATGTTTTCCCTGACAAGGAGACATTAGACATGCATACGCAGTGGCACAAAGCTCAACCCATTCTTGATGACGTAAAGAAATCTGATCACATTTGTGACATCTGTGGGAAACTATACAGCTCCAAAAAGATACTGTGGAGACATAAGAAGCTTCACAAATCCACAGTCGTAGCTGTTGCAAAGCTACAGTCAGCTGGCAAGAACTTAGCAAGTAGTCCACTTATATGCACCCTCTGTCACAAGGTGTTCAATAATACTCGGTCGCTTCATCGTCACAGGCTCAACCTACATGGTAACATATTTAATCAACAACCCGAACAGGTATACGACAACGCGAGAAGACTGTCTCAAGACGAGCCAAGatctaagaaaataaaattagaagaagaGGATAAAAAAGCACCTCTGCCCATGGATGCCATGAGCGCGGGCAGGAAGTCGGTTATGTGCCACGTCTGTAGGAAGTTCTTTGCGAACATGAGCGTATTGTACAAGCACAAACAATTGGTGCACAATAAGACTCACGCGAATCTGTTACAGAATCTAGCCAAGTCATATAATATCGAATGTATACCGTTACCCAGCAATGATGGTAAAGTCCTTTGCAACATTTGCTACAAGAAGTTTTCTGGTGTGTCGAATCTGCGCCAGCATTTTAccataaaacataaaaatgctCCTCCCAAATTTGCTTGTTCTGTAGACGGTTGCAAGCTCACGTTCCCAACTCCGACAATCGTAAAGAACCATGAATTGTCGCACAACAGCACTATCTATAGTTGTACTTTATGCGACAGACACGTGTTCAACAAGGCAGCAATGTCAGATCACTTACTAACGACACACAACACTATCTACAACGCTGAGAACAGCAAGAACTTCCACAGAGAGATGGATTTGACCAAATATGTGGTGGAGGGTGCAGTAGACGCGACTTGTCCTCAATGCAAGATCAAGTATCCCAACAATAGGGCTATGAAGATTCACTACTTCAAGTTCCACGAGGGTACAAACCAGTAG
Protein Sequence: MDEVVELQNMEDVCRLCLSTDEPKLSVFETEDSPVPIANKIQACLSIQILITDKLSTKICVQCIKNVNDWHNYKETCLRSQDKLHRWLEQHMQPNPMVITIKNEPVDFDFCEDNVEVISESTNDSDLEATNLEENNKPLEINDQGQQLPDDDVALDRDQPALTKDMDICIKSEPQDDYDTDCTIEIESVTGSELVLNPLSSSEDRIMEADSTQKSNASTSASKKKVRRGPHTHFRGARVFKQKCVHCQINLHSKYSYAKHMERFHSDKQNGSVNQLELEDEEELVEDLEDELMSMEKDAPLTQVQQNIISQLKTYSCYSCEQSFSDRRSTLFHIRQHMPDLRPHTCIACLTEFPDRSMYKVHCRASFECAMKIALVVPKQGLQKCFTCNMCLRSLPDRKQLLTHLSKHSDKQYEELVSPTRSPPKLKPVTPLPSLRQESPKKSLKGNHTMNIPSPYKNGDPAHNHECDLCGMIYRYKPNMLKHRDLCQRLSSDARTSYRCVHCGMTYLVFKKFHSHLTVDHKKSDFICSECGSKFKSPSDYLEHHKEHSNNLNKEGTSESKSNILKVTQNISKPIKDWDTFEAEVNAGKLSDSNQYSCALCNLEFTTRAELMEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANISCVEYGAVQEDSQDSNSVNVSATSDPGDKKNVCDECGKIFSNSANLKRHIRNIHNVIRGNIICTHCRRTFKSKESHDRHLATDHPKIAKSIHQCSKCRKTFFFRANLNLHFETAHAQELGGHGCDICGKIFMEESSLKIHRSWHNRANSRLSLRFMKKDVQKPLTQTKQEEFFNSSMNRPARARKSYPNLPPEKPNGNFQCQVCSDKFNDVTELRTHLWDVHCARNKAEKSFSGDEFQCELCTNVFPDKETLDMHTQWHKAQPILDDVKKSDHICDICGKLYSSKKILWRHKKLHKSTVVAVAKLQSAGKNLASSPLICTLCHKVFNNTRSLHRHRLNLHGNIFNQQPEQVYDNARRLSQDEPRSKKIKLEEEDKKAPLPMDAMSAGRKSVMCHVCRKFFANMSVLYKHKQLVHNKTHANLLQNLAKSYNIECIPLPSNDGKVLCNICYKKFSGVSNLRQHFTIKHKNAPPKFACSVDGCKLTFPTPTIVKNHELSHNSTIYSCTLCDRHVFNKAAMSDHLLTTHNTIYNAENSKNFHREMDLTKYVVEGAVDATCPQCKIKYPNNRAMKIHYFKFHEGTNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00226094;
90% Identity: iTF_00226094;
80% Identity: iTF_00224060;