Bopu012628.1
Basic Information
- Insect
- Bombus opulentus
- Gene Symbol
- dl_3
- Assembly
- GCA_034509555.1
- Location
- CM067420.1:2584350-2585508[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-06 0.019 15.1 0.0 19 43 11 34 8 38 0.90 2 2 2.6e-10 6.3e-07 29.6 0.0 122 169 37 85 34 85 0.91
Sequence Information
- Coding Sequence
- ATGGATATTGTAACAGCATTACTATGTATTGAAGGCAGATCAGCTGGTAGCATATCGGTAAATAATACACCAGAAAACAAAACATTTCCTAGTATaagatTGGATACAAAGCTGGCTTTTGAACATAAGAAGAAACCTACTAATATTGATGTAAATACATTGCGGTTGTGTTTCCAAGTTTTCTTAGGGGGAACACAGAAGGAAATGTTCAATATACCATTATCATCACTGGTATCTGACCCTGTATTTGATAAAAGCATGTTcaagtttattatattttATCTTGTGGTGTGCGAGCTCAGTCGCTCTAATATGTCGGTGGCTGGTGGtacgaaaatgattttattatacgagaAGGTAGCAAAGGATAATATGCAAGTTAGATTTTCCAAGAAAGAGGACGGAAAAGTACTTTGGGAAAGATTCGATGATTTTGAACCCGCTCGTGTACGTAAACAgATATTTCCTGTCGATGCAAGTATCGCCACAATCGAAATCTAG
- Protein Sequence
- MDIVTALLCIEGRSAGSISVNNTPENKTFPSIRLDTKLAFEHKKKPTNIDVNTLRLCFQVFLGGTQKEMFNIPLSSLVSDPVFDKSMFKFIIFYLVVCELSRSNMSVAGGTKMILLYEKVAKDNMQVRFSKKEDGKVLWERFDDFEPARVRKQIFPVDASIATIEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -