Blap012576.1
Basic Information
- Insect
- Bombus lapidarius
- Gene Symbol
- Usf1
- Assembly
- GCA_936014575.1
- Location
- CAKXZU010000060.1:407157-408581[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.064 5.3e+02 0.8 0.0 11 38 138 166 137 167 0.79 2 2 4.6e-08 0.00038 20.4 0.3 17 48 217 248 214 252 0.94
Sequence Information
- Coding Sequence
- ATGGATATTTTGGAGCAGCACCTCGAACAGCAGGATGTCAGCACTGTTAACGCGAAGGATGACGGGGGCACGGGAATTGTTATTGAGGAAGCGGAAATCGTGGATTGCGAAGGAGAACCTGTCGGGGAAGATGGAATGCGTTACCAAGAAGCTCTTGCTTATAGAGTGGTCCAAGTAAATGGCGCTACTGCTGGCAATGAAATAGAACTGCCAGTTACCCAACCAGGAAATAATACCGTACAGGTCCTAACATCCCCGTTGAATGGACAATTTTATGTCATTGGAAATGCTAATGATGTTTTCACTACTGCGCAAACATCTAGATCATTGGTTCCTAGGACGACTACATTACAAATAGAAACACCAAGAAATTGTACTACTGTTTTGAAAAAGAGAGATGACAGAAGAAGAGCAACTCATAACGAAGTCGAACGTCGACGAAGAGACAAAATAAACAATTGGATTACAAAATTGGGAAAAATTATTCCCGAGTGTAATGCAGGTGCAAATAGCACTGGTAGTGGCAGTGGTGAAGGAAAGGCAAATTATGAAACTCAGAGCAAAGGTGGAATTTTATCAAAGGCCTGTGAATATATAACGGAATTAAGAGCAGCAAATCAGGGATTGGGTCAGTGTTTACGCGATAACGAAAAATTACGACAAGAAATAACTGCTTTGAAACAAGTTGTTACACAATTGAAACGTGAGAATCTTCAGCTCAGGTCACAAATGTCACCCTCCACAGGAACGAATGTTGATGTTGTTCATTTGAGTCCTTAA
- Protein Sequence
- MDILEQHLEQQDVSTVNAKDDGGTGIVIEEAEIVDCEGEPVGEDGMRYQEALAYRVVQVNGATAGNEIELPVTQPGNNTVQVLTSPLNGQFYVIGNANDVFTTAQTSRSLVPRTTTLQIETPRNCTTVLKKRDDRRRATHNEVERRRRDKINNWITKLGKIIPECNAGANSTGSGSGEGKANYETQSKGGILSKACEYITELRAANQGLGQCLRDNEKLRQEITALKQVVTQLKRENLQLRSQMSPSTGTNVDVVHLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070773;
- 90% Identity
- iTF_00183675;
- 80% Identity
- iTF_00227042; iTF_00224324; iTF_00220198; iTF_00214792; iTF_00216840; iTF_00226312; iTF_00231081; iTF_00227723; iTF_00228427; iTF_00223596; iTF_00225006; iTF_00219567; iTF_00222959; iTF_00222258; iTF_00224276; iTF_00214741; iTF_00226997; iTF_00216790; iTF_00231031; iTF_00220345; iTF_00223641; iTF_00226362; iTF_00227676; iTF_00224958; iTF_00228382; iTF_00219519; iTF_00222911;