Basic Information

Insect: Bombus ignitus
Gene Symbol: stc
Assembly: GCA_014825875.1
Location: CM026154.1:12534324-12539241[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2 2.2e+04 -4.4 1.6 15 19 566 570 565 570 0.81

2 12 0.17 1.8e+03 -0.7 0.3 4 10 599 605 598 605 0.94

3 12 2.6e-05 0.29 11.5 14.9 4 19 616 631 614 631 0.93

4 12 2.8e-07 0.0031 17.8 16.4 1 18 667 684 667 685 0.97

5 12 3.4e-08 0.00038 20.7 9.2 1 19 723 741 723 741 0.98

6 12 1.1e-06 0.012 15.9 11.8 4 18 788 802 781 803 0.86

7 12 0.00059 6.5 7.2 8.4 1 11 843 853 843 854 0.97

8 12 2e-10 2.2e-06 27.8 13.8 1 19 870 888 870 888 0.98

9 12 0.52 5.6e+03 -2.2 0.6 5 10 916 921 916 922 0.89

10 12 2 2.2e+04 -8.4 11.4 10 19 935 945 924 945 0.77

11 12 2.2e-07 0.0025 18.1 12.3 1 16 981 996 981 1007 0.85

12 12 8.1e-06 0.089 13.1 13.6 1 19 1013 1032 1013 1032 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2	2.2e+04	-4.4	1.6	15	19	566	570	565	570	0.81
2	12	0.17	1.8e+03	-0.7	0.3	4	10	599	605	598	605	0.94
3	12	2.6e-05	0.29	11.5	14.9	4	19	616	631	614	631	0.93
4	12	2.8e-07	0.0031	17.8	16.4	1	18	667	684	667	685	0.97
5	12	3.4e-08	0.00038	20.7	9.2	1	19	723	741	723	741	0.98
6	12	1.1e-06	0.012	15.9	11.8	4	18	788	802	781	803	0.86
7	12	0.00059	6.5	7.2	8.4	1	11	843	853	843	854	0.97
8	12	2e-10	2.2e-06	27.8	13.8	1	19	870	888	870	888	0.98
9	12	0.52	5.6e+03	-2.2	0.6	5	10	916	921	916	922	0.89
10	12	2	2.2e+04	-8.4	11.4	10	19	935	945	924	945	0.77
11	12	2.2e-07	0.0025	18.1	12.3	1	16	981	996	981	1007	0.85
12	12	8.1e-06	0.089	13.1	13.6	1	19	1013	1032	1013	1032	0.97

Sequence Information

Coding Sequence: ATGGCTACTTGGGATGGTTCTTATTCAGGACCAGATGACCAAAATTATTGTCAAATGTATCCTGATCAAAGCGTACCTGGGCCTGCAACAGGAAATTGGACATTATTTTCTGATAATATAAATAACGATTATTTACAACCTAGTCGTGAGTTCTACGTACAAAATGAACCTATATTTGAACAGAATAGTCCAAATGCTTTCTATCATTCGAACACGAATAATGTTATGCCAAGTTTGTTGACTACAACCAATAATTATCATGGGCATGTAATAAACCCAGTAGGAAATACACAAGTATTAAATAGCGAGGAGTACTTCCCAAATGTTGTTAAATCTCAACAAGGCTACGTATCTAATGACTCTTGGAAATATGATAACAATTTAACGAAGGACGAAGATAAATATGTCTCTACAAAGAGAATTAAGGAATCTTCAGGCAGCGCAGTCAATCACTCAAAATTACATGTCATGGCTGAAGAGTTTGTGCCAAGTAATAGAGGATATGGTGATAGAAGTAAAAATAAAGAATTAGAGAATACAAAATCTACTAACGATGCAAATGATTGTGTCAAGGATAATGGCATGATATCAGATAAATACTTCTTTTGTAATGAGAGTAGGCATGAAGGTAAATATAATAATAGCAAGAAATGTTCTAATTATAAACACAAAGAAAGACATCAAGATCAGTGTTACAAAAAAGATGCATATAAAAATTCCTATCAACAGCATGTCAAAACTTCTCATAAACTTCAAGGTAATAAATACTTTACTAATAAGTATTATGCAGGAAAATCACAAGTAAATTCAAAAGTTATAAATGAAAATGCATTGGATCAATGTTCAATGACTAATAGTGCTACTTGTGATAATAAAAATGATCCTGTAATAAATTTGAATAAAGGAGAATCATCATCAAGTATCAATGTATGTTCAAATAAAAATAAAAATTTTTCGAATGAGATTAATGATAAAAGAACTATCATTGGTGATAATAATGTACAAGGTGATAGCATACAGCAGCCCAAAAATTCGATGAAGGAATTTACTTACTATAATCCTGGCTTCAAACAGACCTACAATAATCATAGAAATTTAAGAAAATATCAGTATAATGATAGATATAACAGGGAAGAAAATTTTTATAAAGAAAGGCGACATCACTATCCAGGATATGGTAGAGAAAATTATAATAAAGAGGATAAATTTAAAGTAAGAAATGACATGTGCAGTAATGGAGAATGTAACGAATATAAAGAATGTTTTAATGAGAGAACTGGATTAGAAGCAAAAGAGATAAAAGAGAAAAGGCACAACTATCAAGGATATAATGGATTTAAAGAACATCATAAGGAAGCTAAACTAGAGATCTTTAAAGAGAAAGATAAAGGTAAATATTATGTATCTGAAAATAAAGAGAAAGGAAATGAACATTGGAGAAATAAAAGGGAAATTAACGAAAGAAATAATATTCAGAAACGGGGACAAAATAGAAAGTCACCAGTTGATGATGATTCAAGTCAAAGAGAAAGACTAGCAGAACAGTTGAATAGAGGACAATTAGAATGTTTAGTATGTTGTGAGTATATTAAACAGAGTGATTATGTTTGGTCATGTTCTAACTGCTATCATGTTTTGCATCTGAAATGTATTAAAAAATGGGCAAAGTCATCACAATCTGAAAATGGCTGGAGATGTCCAGCATGCCAAAATGTTAACTTAGTAATTCCTGAAGATTACTTTTGCTTTTGTGGCAAAACAAGAGTACCTGAATGGAATCGTAGAGATGTTGCACATTCTTGTGGTGAAATTTGCGCTAGAACATTATCCAAAAATAGTTGTCCGCATAAGTGCACTCTTCTATGCCATCCTGGATCTTGTCCACAATGTACAGCAATGGTAACAAAATATTGTGGCTGCGGTAAAACTCAGCAAATAGTACAGTGTAGTACTCAGAAATTATTGCTGTGCGAGTCTACATGTGGTAAAAATTTAAAATGTGGCCGGCATAAATGTCAAAGTAAATGCCATCATGGAGAATGTGCAAATTGCGAAGAAACAATAACGCAAAAGTGTTATTGTGGCAAAAGTACAAAAGAAATAACTTGCCAGAGTAATATTTCGTTTACATATTCTTGTGGAACTATTTGCGGCAAATTGTTAGAATGTGGTAATCACACTTGTACAAAATTGTGTCATGCGGATGCTTGCGAATCCTGTTCTTTAACTCCTGACAAAATTACAACTTGCTGCTGCGGGCAAACACCATTAATAGATAAGAGACAAACTTGCTTAGATTCAGTCCCGGTCTGCGACAAAATATGTTCGAAAAATTTGAAATGCGGGCAACCTAATAATCCTCATAAGTGTAAAGCGAAGTGTCACGTAGGAGATTGTCCTGTTTGTGACTTAATTACCAATGTTAGATGCCGCTGCGGAAATATGGATAGGGAAATAGCCTGTAAAGATTTGATATCAAAAGCTGACGATGCACGGTGTGAAAAGCGGTGTATAAAAAAAAGATCTTGTGGGAAGCACAAATGTAACCAACTGTGTTGTATAGAGATAGAACATATTTGTCCATTAATATGTTCTAAAACTTTAAGCTGTGGAAGGCATAAATGTGAACAAAGCTGTCATAAAGGAAGGTGTCAACCTTGTTGGCGAAGTAGTTTTGATGAATTATATTGTGAATGCGGGGCTTCTGTGATATATCCTCCCGTTCCTTGTGGGACAAGAAGACCTACATGTGACAGGCCTTGCTCTCGACAGCACTCTTGTGGCCACGAAATATTACATAATTGCCATAGTGAATTAAACTGTCCGCCTTGTACCGTTCTTACTCAAAGATGGTGTCATGGCAAACATGAGTTACGAAAGGCTGTACCGTGCTATGTTAACGAAATTTCATGTGGTTTGTCATGTAACAAGCCCATATCCTGTGGCCGACATAAATGCATTACTATTTGTCATTCTGGGCCATGTGAAAAACCAGGACAACAATGTTCTCAGCCTTGTACTGTTCAAAGGGAACTGTGTGGACACATCTGTGCTGCTCCGTGTCACGAGGGTAAATGTCCAGACACACCTTGCAAGGAGATGGTTAAGGTGACGTGTCAGTGTGGGCATAGGACTATGTCGCGTGTTTGCGCCGAAAATTCTAAAGAATATCAGAGAATAGCAAGTAGCATATTAGCTAGTAAAATGGCTGATATGCAATTAGGTCATTCTATTAATTTGGAAGAAGTATTTGGTCAAGGAGCAAAGAAGCAGAATCAGTTAAAAACTTTAGAATGCAATGATGAATGTAAAGTAATAGAACGAAATAGAAGATTGGCGTTGGGTTTGCAAATTGTAAATCCAGATTTAAGTGGAAAATTAATGCCTAGATACAGTGATTTTATGAAACAGTGGGCTAAAAGGGATCCTCATTTTTGTCAGATGGTTCATGACAAATTAACCGAGTTGGTTCAATTAGCAAAAACCTCTAAACAAAAATCACGCAGTTATTCCTTTGATAGCATGAACAAAGATAAACGTCATTTTATTCACGAGTCTTGTGAACATTTTGGTTGCGAGAGCCAGGCGTACGATCAGGAGCCAAAAAGAAATGTTGTTGCGACTGCTGTAAAAGATAAGTGTTGGTTACCTAGTTATAGTTTATTAGAGATTGTACAACGGGAAAATGGTCAGAGGAAAGTTCCAGGTCCAATGTTAAATACTACAAAGGCTAATGGGTCCGTGAAGACAATATTATCACTGCCTGCGAAAAAGATTCAAAAGCCAGAAACAACATTAAGCATAAAAACATCAGAACCAGAAATAGATTATTTTGATTATAAGGGTTAA
Protein Sequence: MATWDGSYSGPDDQNYCQMYPDQSVPGPATGNWTLFSDNINNDYLQPSREFYVQNEPIFEQNSPNAFYHSNTNNVMPSLLTTTNNYHGHVINPVGNTQVLNSEEYFPNVVKSQQGYVSNDSWKYDNNLTKDEDKYVSTKRIKESSGSAVNHSKLHVMAEEFVPSNRGYGDRSKNKELENTKSTNDANDCVKDNGMISDKYFFCNESRHEGKYNNSKKCSNYKHKERHQDQCYKKDAYKNSYQQHVKTSHKLQGNKYFTNKYYAGKSQVNSKVINENALDQCSMTNSATCDNKNDPVINLNKGESSSSINVCSNKNKNFSNEINDKRTIIGDNNVQGDSIQQPKNSMKEFTYYNPGFKQTYNNHRNLRKYQYNDRYNREENFYKERRHHYPGYGRENYNKEDKFKVRNDMCSNGECNEYKECFNERTGLEAKEIKEKRHNYQGYNGFKEHHKEAKLEIFKEKDKGKYYVSENKEKGNEHWRNKREINERNNIQKRGQNRKSPVDDDSSQRERLAEQLNRGQLECLVCCEYIKQSDYVWSCSNCYHVLHLKCIKKWAKSSQSENGWRCPACQNVNLVIPEDYFCFCGKTRVPEWNRRDVAHSCGEICARTLSKNSCPHKCTLLCHPGSCPQCTAMVTKYCGCGKTQQIVQCSTQKLLLCESTCGKNLKCGRHKCQSKCHHGECANCEETITQKCYCGKSTKEITCQSNISFTYSCGTICGKLLECGNHTCTKLCHADACESCSLTPDKITTCCCGQTPLIDKRQTCLDSVPVCDKICSKNLKCGQPNNPHKCKAKCHVGDCPVCDLITNVRCRCGNMDREIACKDLISKADDARCEKRCIKKRSCGKHKCNQLCCIEIEHICPLICSKTLSCGRHKCEQSCHKGRCQPCWRSSFDELYCECGASVIYPPVPCGTRRPTCDRPCSRQHSCGHEILHNCHSELNCPPCTVLTQRWCHGKHELRKAVPCYVNEISCGLSCNKPISCGRHKCITICHSGPCEKPGQQCSQPCTVQRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSINLEEVFGQGAKKQNQLKTLECNDECKVIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKRDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKANGSVKTILSLPAKKIQKPETTLSIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00217441;
90% Identity: iTF_00217441;
80% Identity: -