Bign015352.1
Basic Information
- Insect
- Bombus ignitus
- Gene Symbol
- dmd-4
- Assembly
- GCA_014825875.1
- Location
- CM026158.1:3299952-3303236[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-25 6e-22 77.5 10.7 1 47 22 68 22 68 0.99 2 2 0.26 1.4e+03 -0.5 0.3 2 9 350 357 349 359 0.81
Sequence Information
- Coding Sequence
- ATGTTGCGTGGAAAGAGTAAAGGTAAAGAGGAGAACGAGGAGGATGAAGGTGAGCTGAAGCAGAGGAGACCAAAGTGTGCTCGGTGTAGAAACCATGGCTTGATTTCTTGGTTGAGGGGACACAAAAGAGAATGTCGTTACAGAGAGTGTCTTTGTCCAAAGTGTTCTCTGATTGCTGAGAGGCAAAGAGTAATGGCTGCTCAGGTCGCCCTTAAGAGGCAACAGGCGGCTGAGGACGCTATTGCCCTAAAAATGGCTAAAGTAGCGACTGGACAGAGATTCAATCGACTTCCTCCAGGAAAAATATTTGGCATGGCAGTAACCGAACCAAAGTCAGTTGTAGACACTAACAAAGAAGAAGATCCTCCTCCTAAAGAGGGCTTACACATTGAAGATCCGAGGAAAGACGACTCTCTGAACAACCAGTGTCAGGATTCGTCAACGATCAACGAGAACCCGCCAAAGTACAAGAGCCTGGTATTCAACGTGAACAATTCAGAGGAGACAAAAGAGAGCAGCGTGTCGCAGACTTCGGTGGAAACATTAGCTCGACTTTTTCCCAATACGAAGCTCTCGGTACTACAATTGGTGTTGCAAAGATGCGGCCAGGACCTTCTAAAAGCCATCGAGTACTTTGCCAGTGAAAGTTTCGGCATCAATTCGACCACCTACGCATCGGCGTTTCGACCACCTCAAACCATCAACGAGACCAGGAGTAACGAACATATTGCAGGCACGATGTTGGCTCCAATATACTCCAGTCTCTCCAGGAACTTCTACGGAGATGGTTACTGCTTGTTGAACATCGTTCCCGATCAGTTTCCCAAAAATATAGCAGATACGACGGCTTGCACCACGTTACCCATAAAAAACAGCGGACAACACGAGCAAGAGGGAGTAGCTCTAAATGTTCAGTATAACAATTACTTCAATTCTGGCGTACAGCAACAACTGAGAGATCACATGTATGCTCAGGTTACGGATCATCTTTCACCAAGGCCTGGTTTCCTTCATTTACCACCAGTATTGCCGGGTATCCCTTGCGTGCAGCCTAATTGCACTCAGTGCAGTTACAAATTTCCCTAA
- Protein Sequence
- MLRGKSKGKEENEEDEGELKQRRPKCARCRNHGLISWLRGHKRECRYRECLCPKCSLIAERQRVMAAQVALKRQQAAEDAIALKMAKVATGQRFNRLPPGKIFGMAVTEPKSVVDTNKEEDPPPKEGLHIEDPRKDDSLNNQCQDSSTINENPPKYKSLVFNVNNSEETKESSVSQTSVETLARLFPNTKLSVLQLVLQRCGQDLLKAIEYFASESFGINSTTYASAFRPPQTINETRSNEHIAGTMLAPIYSSLSRNFYGDGYCLLNIVPDQFPKNIADTTACTTLPIKNSGQHEQEGVALNVQYNNYFNSGVQQQLRDHMYAQVTDHLSPRPGFLHLPPVLPGIPCVQPNCTQCSYKFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00215728;
- 90% Identity
- iTF_00216417;
- 80% Identity
- iTF_00232002; iTF_00221930; iTF_00214412; iTF_00232624; iTF_00225938; iTF_00230709; iTF_00226617;