Basic Information

Insect: Bombus difficillimus
Gene Symbol: stc
Assembly: GCA_014737525.1
Location: JACXIT010000203.1:1791850-1796622[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2e+04 -4.4 1.6 15 19 565 569 564 569 0.81

2 13 0.17 1.7e+03 -0.7 0.3 4 10 598 604 597 604 0.94

3 13 2.6e-05 0.26 11.5 14.9 4 19 615 630 613 630 0.93

4 13 2.8e-07 0.0028 17.8 16.4 1 18 666 683 666 684 0.97

5 13 3.4e-08 0.00034 20.7 9.2 1 19 722 740 722 740 0.98

6 13 3.9e-06 0.039 14.1 11.8 4 18 787 801 780 802 0.85

7 13 0.00059 5.9 7.2 8.4 1 11 842 852 842 853 0.97

8 13 2 2e+04 -4.4 1.1 4 10 857 863 856 863 0.81

9 13 2e-10 2e-06 27.8 13.8 1 19 869 887 869 887 0.98

10 13 0.51 5.2e+03 -2.2 0.6 5 10 915 920 915 921 0.89

11 13 2 2e+04 -8.4 11.4 10 19 934 944 923 944 0.77

12 13 2.2e-07 0.0023 18.1 12.3 1 16 980 995 980 1006 0.85

13 13 7.2e-06 0.072 13.3 13.2 1 19 1012 1031 1012 1031 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2e+04	-4.4	1.6	15	19	565	569	564	569	0.81
2	13	0.17	1.7e+03	-0.7	0.3	4	10	598	604	597	604	0.94
3	13	2.6e-05	0.26	11.5	14.9	4	19	615	630	613	630	0.93
4	13	2.8e-07	0.0028	17.8	16.4	1	18	666	683	666	684	0.97
5	13	3.4e-08	0.00034	20.7	9.2	1	19	722	740	722	740	0.98
6	13	3.9e-06	0.039	14.1	11.8	4	18	787	801	780	802	0.85
7	13	0.00059	5.9	7.2	8.4	1	11	842	852	842	853	0.97
8	13	2	2e+04	-4.4	1.1	4	10	857	863	856	863	0.81
9	13	2e-10	2e-06	27.8	13.8	1	19	869	887	869	887	0.98
10	13	0.51	5.2e+03	-2.2	0.6	5	10	915	920	915	921	0.89
11	13	2	2e+04	-8.4	11.4	10	19	934	944	923	944	0.77
12	13	2.2e-07	0.0023	18.1	12.3	1	16	980	995	980	1006	0.85
13	13	7.2e-06	0.072	13.3	13.2	1	19	1012	1031	1012	1031	0.97

Sequence Information

Coding Sequence: ATGGCTACTTGGGATGGTTCTTATTCAGGACCAGATGACCAAAATTATTGTCAAATGTATTCTGATCAAAGCGTACCTGGGCCTGCAACAGGAAATTGGCAATTATTTTCTGATAATATAAATAACGATTATTTACAACCTGGTCGTGAGTTCTATGTACAAAATGAACCTATGTTTGAACAGAACAGTCCAAATGCTTTCTATCATTCGAACACGAATGTTATGCCAAGTTTGTTGACTACGACCAATAATTATCATGGGCATGTAATAAACCCAGTAGGAAATGCACAAGTATTAAATAGCGAGGAGTACTTTCCAACTGTTGTCAAATCTCAACAAGGCTACGCATCTGATGACTCTTGGAAATATGATAACAATCTAATGAAAAACGAAGATAAATATGTCTCTACAAAGAGAATTAATGAATCTTCATCAGGCAGTATAGTCAATCACTCAAAATTACATGTCATGGCTGAAGAGTTTGTGCCAAATAATAGAGGATATGGTGATAGAAGTAAAAATAAAGAGTTAGAGAATACAAAATCTACTAATGATGCAAATTATTGTGTCATGGATAATGGCAAGATATCAGATAAATACTTCTTTTGTAATGAGAATAGGCATGAAGGTAAATATAATAAGAAGAAATGTTCTAATTATAAACACAAAGAAAGACAGCAAGATCAGTGTTACAAAAAAAATGCATATACAAATTCCTATCAACAGCATGTCAAAACTTCTCATAAACTTCAAGGCAATAAATACTTTACTAATAAGTATTATGCAGGAAAATCACAAGTAAATTCAAAAGTTATAAATGAAAATGCATTGGATCAATGTTCAATGACTAATAGCGCTACTTGTAATAATAAAAAGGATCCTGTAATAAATTTGAATAAAGGAGAATCATCGTTAAGTATGAATGTATGTTCAAATAAAAATAGAAATTTGTCAAATGAGGTTAATGATAAAAGAACTATCGTCGGTGATAGTAATGTACAAGGTGATAGCATACAGCAGCCCAAAAATTCGACGAAGGAATTTACTTACCATAATCCTGGCTTCAAACAGACCTACAATAATCATAGAAATTTAAGGAAATATCAGTGTAATGATAGATATAAGAGGGAAGAAAATTTTTATAAAGAAAAGCGACATCACTATCCAGGATATGGTAGAGAAAATTATAATAAAGAAGATAAATTTAAAGTAAGAAATGAAATGTGCATTAATGGAGAATGTAACGAATATAAAGAATGTACTAACGAGAGAACTGGATTAGAAGCAAAAGAGATAAAAGAGAAAAGGCACAACTATCAAGGATATAATGGTTTTAAAGAACATCATAAGGAAGCTAAACTAGAAATCTTTAAAGAGAAAGATAAAGGTAAATATTATGTATCTGAAAATAAAGAGAAAGGAAATGAACATTGGAGAAATAAAAGGGAAATTAGCGAAAGAAGTAATATTCAGAAACGGGGACAAAATAGAAAGTCACCAGTTGACGATGATGCAAGTCAAAGAGAAAGATTAGCAGAACAGTTGAATAGAGGACAATTAGAATGTTTGGTATGTTGTGAATATATTAAACAGAATGATTATGTTTGGTCATGTTCTAACTGCTATCATGTATTGCATCTGAAATGTATTAAAAAATGGGCAAAGTCATCACAATCTGAAAATGGCTGGAGATGTCCAGCATGTCAAAATGTTAATTTAGTAATTCCTGAAGATTACTTTTGCTTTTGTGGCAAAACAAGAGTACCTGAATGGAATCGTAGAGATGTTGCACATTCTTGTGGTGAAATATGCGCTAGAACATTATCCAAAAATAGTTGTCCACATAAGTGCACTCTCCTATGCCATCCTGGATCTTGTCCACAATGTACAGCAATGGTAACAAAATATTGTGGCTGCGGTAAAACTCAGCAAACGGTACAGTGTAGTACTCAGAAATTATTGCTGTGCGAGTCTATATGTGGTAAAAATTTAAAATGTGGCAGGCATAAATGTCAAAGTAAATGCCATCATGGAGAATGTGCAAATTGTGAAGAGACAATAACGCAAAAGTGTTATTGTGGCAAAAGTACAAAAGAAATAACTTGTCAGAGTAATATTTCGTTTACATATTCTTGTGGAACTATTTGCGGTAAATTGTTAGAATGTGGTAATCACACTTGTACAAAATTATGTCACGCGGATGCTTGCGAATCCTGTTCTTTAACTCCTGACAAAATTACAAGTTGCTGCTGCGGCCAAACACCATTAATAGATAAGAGACAAACTTGCTTAGATTCAATTCCAGTCTGTGACAAAATATGTTTGAAAAATTTGAAATGCGGGCAACCTAATAATCCTCATAAGTGTAAAGTGAAGTGCCATGTAGGAGATTGTCCTGCTTGTGACTTAATTACCAATGTTAGATGTCGTTGCGGAAACATGGATAGGGAAATAGCTTGCAAAGATTTGATATCAAAAGCTGATGATGCACGGTGTGAAAAAAGGTGTATAAAAAAAAGATCTTGTGGGAAGCACAAATGTAACCAACTGTGTTGTATAGAGATAGAACATGTTTGTCCATTAACATGTTCTAAAACTTTAAGCTGTGGGAGGCATAAATGTGAACAAAGTTGTCATAAAGGAAGGTGTCAACCTTGTTGGCGAAGTAGTTTTGACGAATTATACTGTGAATGCGGGGCTTCTGTGATATATCCTCCCGTTCCTTGTGGGACAAGAAGACCTACATGTGACAGACCTTGCTCTCGACAGCACTCTTGTGGCCACGAAATATTACATAATTGCCATAGCGAATTAAACTGTCCGCCTTGTACTGTTCTTACTCAAAGATGGTGTCATGGCAAACATGAATTACGAAAAGCTGTACCATGCTATGTTAACGAAATTTCATGTGGTTTGTCATGTAACAAGCCCATATCCTGTGGCCGACATAAATGCATTACTATTTGTCATTCTGGACCATGTGAGAAACCAGGACAACAATGTTCTCAGCCTTGTACTGCTCAGAGGGAACTGTGTGGGCACATCTGTGCTGCTCCGTGTCACGATGGTAAATGTCCGGACACACCTTGCAAGGAGATGGTTAAGGTGACGTGTCAGTGTGGGCATAGGACTATGTCGCGTGTTTGCGCCGAAAATTCTAAAGAATATCAGAGAATAGCAAGTAGCATATTAGCTAGTAAAATGGCTGATATGCAATTAGGTCATTCTATTAATTTGGAAGAAGTATTTGGTCAAGGAGCAAAGAAGCAGAATCAGTTAAAAACTTTAGAATGCAATGATGAATGTAAAATAATAGAACGGAATAGAAGATTGGCGTTGGGTTTGCAAATTGCAAATCCAGATTTAAGTGGAAAATTAATGCCTAGATACAGTGATTTTATGAAACAGTGGGCTAAAAAGGATCCTCATTTTTGTCAGATGGTTCATGACAAATTAACCGAGTTGGTACAATTAGCAAAAACGTCTAAACAAAAATCACGCAGTTATTCCTTTGATAGCATGAACAAAGATAAACGTCATTTTATTCACGAGTCTTGTGAACATTTTGGTTGTGAAAGCCAGGCATATGATCAGGAGCCAAAAAGAAATGTTGTTGCTACTGCCGTAAAAGATAAGTGTTGGTTACCTAGTTATAGTTTATTAGAGATTGTACAACGGGAAAATGGTCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAAGCTGATGGGTCCGTGAAGACAATATTATCACTGCCTGCGAAAAAGATCCAAAAGCCAGAAACAACATTAAGCATAAAAACATCAGAACCAGAAATAGATTATTTTGATTATAAGGGTTAA
Protein Sequence: MATWDGSYSGPDDQNYCQMYSDQSVPGPATGNWQLFSDNINNDYLQPGREFYVQNEPMFEQNSPNAFYHSNTNVMPSLLTTTNNYHGHVINPVGNAQVLNSEEYFPTVVKSQQGYASDDSWKYDNNLMKNEDKYVSTKRINESSSGSIVNHSKLHVMAEEFVPNNRGYGDRSKNKELENTKSTNDANYCVMDNGKISDKYFFCNENRHEGKYNKKKCSNYKHKERQQDQCYKKNAYTNSYQQHVKTSHKLQGNKYFTNKYYAGKSQVNSKVINENALDQCSMTNSATCNNKKDPVINLNKGESSLSMNVCSNKNRNLSNEVNDKRTIVGDSNVQGDSIQQPKNSTKEFTYHNPGFKQTYNNHRNLRKYQCNDRYKREENFYKEKRHHYPGYGRENYNKEDKFKVRNEMCINGECNEYKECTNERTGLEAKEIKEKRHNYQGYNGFKEHHKEAKLEIFKEKDKGKYYVSENKEKGNEHWRNKREISERSNIQKRGQNRKSPVDDDASQRERLAEQLNRGQLECLVCCEYIKQNDYVWSCSNCYHVLHLKCIKKWAKSSQSENGWRCPACQNVNLVIPEDYFCFCGKTRVPEWNRRDVAHSCGEICARTLSKNSCPHKCTLLCHPGSCPQCTAMVTKYCGCGKTQQTVQCSTQKLLLCESICGKNLKCGRHKCQSKCHHGECANCEETITQKCYCGKSTKEITCQSNISFTYSCGTICGKLLECGNHTCTKLCHADACESCSLTPDKITSCCCGQTPLIDKRQTCLDSIPVCDKICLKNLKCGQPNNPHKCKVKCHVGDCPACDLITNVRCRCGNMDREIACKDLISKADDARCEKRCIKKRSCGKHKCNQLCCIEIEHVCPLTCSKTLSCGRHKCEQSCHKGRCQPCWRSSFDELYCECGASVIYPPVPCGTRRPTCDRPCSRQHSCGHEILHNCHSELNCPPCTVLTQRWCHGKHELRKAVPCYVNEISCGLSCNKPISCGRHKCITICHSGPCEKPGQQCSQPCTAQRELCGHICAAPCHDGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSINLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKADGSVKTILSLPAKKIQKPETTLSIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00217441;
90% Identity: iTF_00217441;
80% Identity: -