Basic Information

Insect: Bombus difficillimus
Gene Symbol: -
Assembly: GCA_014737525.1
Location: JACXIT010000091.1:869581-878608[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 1.5e-05 0.0014 19.1 0.9 1 23 217 239 217 239 0.98

2 30 0.0083 0.78 10.5 3.7 1 23 262 285 262 285 0.96

3 30 0.00012 0.012 16.2 0.5 2 23 292 314 291 314 0.96

4 30 0.0051 0.47 11.2 0.1 1 21 335 355 335 356 0.95

5 30 0.0053 0.49 11.1 0.6 2 23 452 473 451 473 0.96

6 30 0.00071 0.067 13.8 1.1 1 23 479 502 479 502 0.97

7 30 0.00011 0.01 16.4 0.1 1 23 532 555 532 555 0.96

8 30 0.022 2 9.2 0.4 1 23 561 584 561 584 0.96

9 30 0.057 5.4 7.8 0.8 1 23 597 619 597 619 0.97

10 30 3.3e-05 0.0031 18.0 0.9 3 23 663 684 662 684 0.96

11 30 0.0012 0.11 13.2 0.9 2 23 744 767 743 767 0.95

12 30 2.9 2.7e+02 2.5 0.0 2 23 776 798 776 798 0.84

13 30 0.036 3.4 8.5 0.1 2 23 805 827 804 827 0.95

14 30 1.2e-05 0.0011 19.4 1.2 1 23 835 857 835 857 0.98

15 30 0.93 87 4.0 0.8 3 23 886 908 884 908 0.83

16 30 0.00019 0.018 15.6 3.3 1 23 911 934 911 934 0.97

17 30 0.002 0.19 12.4 0.4 2 23 941 963 940 963 0.96

18 30 0.00084 0.079 13.6 3.9 1 21 987 1007 987 1008 0.95

19 30 0.0025 0.23 12.1 1.8 2 23 1022 1043 1021 1044 0.93

20 30 0.41 38 5.2 1.4 1 23 1047 1070 1047 1070 0.94

21 30 0.013 1.2 9.9 0.9 2 23 1077 1100 1076 1100 0.92

22 30 2.8 2.6e+02 2.5 0.2 2 23 1108 1130 1108 1130 0.94

23 30 8.6 8.1e+02 1.0 0.0 2 23 1137 1159 1136 1159 0.88

24 30 0.21 20 6.1 2.7 2 23 1168 1190 1168 1190 0.96

25 30 1.6 1.5e+02 3.3 0.1 2 23 1196 1218 1196 1218 0.95

26 30 5.2e-05 0.0049 17.4 0.2 1 23 1281 1304 1281 1304 0.96

27 30 0.016 1.5 9.6 3.0 1 21 1329 1349 1329 1350 0.94

28 30 0.46 43 5.0 1.3 2 23 1446 1468 1445 1468 0.94

29 30 0.26 25 5.8 0.2 2 23 1475 1497 1474 1497 0.94

30 30 1.1 1e+02 3.8 1.9 1 23 1508 1530 1508 1530 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	1.5e-05	0.0014	19.1	0.9	1	23	217	239	217	239	0.98
2	30	0.0083	0.78	10.5	3.7	1	23	262	285	262	285	0.96
3	30	0.00012	0.012	16.2	0.5	2	23	292	314	291	314	0.96
4	30	0.0051	0.47	11.2	0.1	1	21	335	355	335	356	0.95
5	30	0.0053	0.49	11.1	0.6	2	23	452	473	451	473	0.96
6	30	0.00071	0.067	13.8	1.1	1	23	479	502	479	502	0.97
7	30	0.00011	0.01	16.4	0.1	1	23	532	555	532	555	0.96
8	30	0.022	2	9.2	0.4	1	23	561	584	561	584	0.96
9	30	0.057	5.4	7.8	0.8	1	23	597	619	597	619	0.97
10	30	3.3e-05	0.0031	18.0	0.9	3	23	663	684	662	684	0.96
11	30	0.0012	0.11	13.2	0.9	2	23	744	767	743	767	0.95
12	30	2.9	2.7e+02	2.5	0.0	2	23	776	798	776	798	0.84
13	30	0.036	3.4	8.5	0.1	2	23	805	827	804	827	0.95
14	30	1.2e-05	0.0011	19.4	1.2	1	23	835	857	835	857	0.98
15	30	0.93	87	4.0	0.8	3	23	886	908	884	908	0.83
16	30	0.00019	0.018	15.6	3.3	1	23	911	934	911	934	0.97
17	30	0.002	0.19	12.4	0.4	2	23	941	963	940	963	0.96
18	30	0.00084	0.079	13.6	3.9	1	21	987	1007	987	1008	0.95
19	30	0.0025	0.23	12.1	1.8	2	23	1022	1043	1021	1044	0.93
20	30	0.41	38	5.2	1.4	1	23	1047	1070	1047	1070	0.94
21	30	0.013	1.2	9.9	0.9	2	23	1077	1100	1076	1100	0.92
22	30	2.8	2.6e+02	2.5	0.2	2	23	1108	1130	1108	1130	0.94
23	30	8.6	8.1e+02	1.0	0.0	2	23	1137	1159	1136	1159	0.88
24	30	0.21	20	6.1	2.7	2	23	1168	1190	1168	1190	0.96
25	30	1.6	1.5e+02	3.3	0.1	2	23	1196	1218	1196	1218	0.95
26	30	5.2e-05	0.0049	17.4	0.2	1	23	1281	1304	1281	1304	0.96
27	30	0.016	1.5	9.6	3.0	1	21	1329	1349	1329	1350	0.94
28	30	0.46	43	5.0	1.3	2	23	1446	1468	1445	1468	0.94
29	30	0.26	25	5.8	0.2	2	23	1475	1497	1474	1497	0.94
30	30	1.1	1e+02	3.8	1.9	1	23	1508	1530	1508	1530	0.92

Sequence Information

Coding Sequence: ATGGAGTCCAGGGAACGCTACCAGGAGCTCTGCAGACTATGCGCATCCTACGACGCCGTCAAGATGGACATCTTCGGTCAAGAGGGCAAGAACAGACAGCTCGTTGACAAGATACAAGCTTGTCTGCCGTTTAAGATTGCAGAAAATGATCGACTACCAAAATGCCTCTGTTATCGGTGTATGTACAATTTGGAAAATTTCTATGATTTTAGAACAGCATGTGTTAATGCAGTGGCACTCTTGGAAAGGTGTTTATCACCTTCAGAATCGAATGGAGATGTTACAACCATCTTGACGTGCTGTAATGATTCAGAGTTTTTCGAAGGACGGAAAAGCATACCAGTGTTAATTCCGGAAGCTCCTATCGTAAATCCAAATGCTGCTTTAGGCACGCCACCCAGATTGAATTCTGATGGAGAGGCTGATCATGAGACAGAAGAAATTGATAACAGTGGGACAGACGAAGCAACGGTCATGGACGACTCTGAAGATCGTCATTCAGAGGAGTATGAAATGGATATGGAGACAAATCCAAGTGATTTTTTGGAAATGACCTCGATAGTTGCAGAAGAACCTGAAGAATCAGGATTGAAACATCAGGATGTTTCCAGTAACTTATCAGAGCATACATCTCAACAACATGAAGTTTATGTTTGTTCCTTGTGCAGCAAAGCATTTAGTTCAAAGGGTCATTTGTCCTTGCACGCACGCATTCACGTTGGTGCCGGTGATGTGATTGGTGAAAAAGTTCTAACGGATGATCATACGTCATATAAAAGGCCCTATCAGTGTGATCTCTGTCATAAATCATACTCCACTGCAAAACATCGTTGGGGTCATGTGTCTACAACTCATAGAGGCCATCCGGCAGTGACATGCGGTTATTGTTCCCGTATCTACTCAACCCGAACAAATTTGGAAGAACATATAAAATCACGTCATGCTGGTCTTCCAGCACCTACGGACGTTCCACTGAACAATGCCTATCGGCCAGAAAATAGATATCAATGCAATGCTTGCGGGAAAATTTGCACGGATGCTATGGAATTGAATCTTCATGGTAGGATTTGTACCGAAGGACAGAGATTAGATCTTTCAGGAAAAAACGAGATTAGTGATAATAAAGTTGTGGATAGTTCGGAAGCTTCAAGTATTGGAAGTGATGACGATGGCAAAGATTATAGAAGTGCGGAAGCTAAATTAGCGAAAAATCCTCAATTAACAATTTTAAAACAAGCATTAACAAAAGGGGATAGTCTTAAGCGAGATTTTGAAGACAAATTTACTACAAATTGCAAACCAAAAAAATTACCGAGAACAGAGCATACGGACTTTCAACATACTAAGAAGTGGTATTGTGAATCGTGTCCTCAATGTTTCACTTCAGTTAATGATTTAAAAGAACACGAAGCAACTCACGATGCGGATAAGCCATTTATTTGTGTTTTGTGTAAAAAAGATTTTTTTCTTAAATCTTCTTTAAGCAGGCATATTCAAACGTTACATGGCGTTGATCCATGTCCTATGACAAATGCAGAAAATGAAGACGACCATGAGAGTGGACAAGAAAATCTCATTGAAATTGAAACTGTGTTTGTTTGTGAAATTTGTACTCGTGATTTTAATGACCGTGCATCTCTTTGGCTTCATATTCGTGCTACTCACAAGGAATTTGCAGCATTTGCATGTGGTGTTTGTTTAAAAATTTGTGCAGACAACACACAACTTTTGAACCATGTAAATATGTACCACGGCGGCTCGAAATTACTACTTTCTGAACAAAGAAGGTACAGTTGTACTATTTGTGGTAGGCAACATGATTCCAGAAAAAAATTAATTGCTCATGTATCCATACATAACGTGGATCCAAATTATGATCCTGCTACCTTTGTTCAGTTAAATAGTAATTATTATGGTGAGAACATTAACGGTAACGAAACTGCAGAACAAATGCTTGACTACGAAGAGGATAGCGATAAAGTGGACTGTTATATTTGTTATAAATCGTTTCCTAATGAAGATCATTTAATACGACATCAAAGAAATGCACACAGATCGGAACAACTAGTGCCAGCAGGAGATCCTTTAAATCCTTCGAGTTTAAATGGCGGTGGTAATAGAGCTCAATATCATCTCTTTTTCGTTTGTGAACTTTGTGGGAGTTCACATCCTAGTAAATGGGAACGTTGGCTACATGTTAGTTCGTCTCATAGCAATGAATCAGCCATAAAATGTGATCGTGAAGATTGCGGTAAAATTTTTGCTACAAAATCTCTCAGAAACGAACATATTCAGCATCATGCAATTCAAGGTTCATCCCCGAATACTTGTGAAATTTGTGGTAAACTTTGGGGTAGTAGAGTTGATTATTGGAAGCATGTTATGGGCGTTCATTCGGATACTGTTCCATTAATTTGCGGTGTCTGCTTAAAAGTGTTCCCAAATGTTTTGCAACTGAGTACTCACGTAAGATCGAAACATTGGCCATTAACGAATGGTGACTTTAGCTGTGACATTTGTGGTAGACCATATTCGAATAAATCCAAAATGTCCAGACATAGAAAAATCCACGGTTTTGAGGAAAGCTGTGAGAATGGGGCTGAAAATAGCGAGAATAAAGTAGAGGGACGAAGTATGAGGGAAACAGAATTAAGTTGCGAGCTTTGTGCAGATTTGAAGTTTACTAGTTTAGAAAAATTATGTAATCATAGACGAATCGTTCATGGACTTTTCCCTTGCGATCTCTGTAATAAATGCTATGGAAGAACTTCACATTTATGGAAACATGTAAACAGAGTTCACAAAGGTCATGAAGATGTAACTTGCCCTTATTGTATGAAAACTAGTGCTTCAAAAGATCATTTAGCAGCGCACATTTCAAAAATTCATAGATACGAACCTGATTCTAGAAAAGATGGGAAAGATAATAGGCAATTTAAAACCGAAGAAGTTAGTTTACATTATTGCGAAAAATGTAATAAAGGATTTCACAAGCGGTATCTATTGCGTAGACATATGAAAGGATGCCAGAATTACAGGAAAGACCCTGGAGCATTATTAACGAGATGCAGAGCTTGCGAAAGAATATTTAAAGATCGTGCCAGTTTACAAAAGCATATCGAGAATCATCATAGCACATACACGTGTCATCTTTGTAATGAAACAATTACCTCGAAATTAGGGATTATGACACATAACAGGGTGAAGCATATGGATCATCCAGATTTAACTTGCAATTTTGGATCTTGTAGGAAATTATTCAGAACTAAAGAAGATTTAGAAGCCCATAGAAAAGATCACAGGTATCATACCACTCCTAACGTTTGTGATTTCTGCGGCGATACTGTTGAAAATAAACTGAAGTTAAAAATGCACGTTTTATCTCTTCATCGCAATGAAATTGGTGTATCTTGTGGAGTGTGTTTAATACCAATGAAAGATCCAAAAGAACTCAAAAGTCACGTAGAAGAAGTTCATTCCAGTGTTCTTTCAAGACCCAATACGTGTCAAGTTTGTGGGAAACAATATGCTTCAAAATGGAAAGCGTTTGATCATACTAAAAAATGCCATGGAAAAGTATTTAGGACTTGCAAACAATGTCTAGCTGTTTTCACTGAAGATTCTGCAATTAGAGATCATTATGAGACAATACATAATATTCCCAAAGATCAACTTGCAGCATTTGAACATAGATTAGATATTGGGTCGAAAAACGAAGATTTTGGAATAGAGTCTCCTGATATAATAGTGAAAGAAGAACCAGAGGATTTAGAATACGAAGTAGATATGTGCGATGAAGATTCTAGTGACTCAAAAAGGAGAAGGTCCTTAACGGATACCTACGATTGTGAAATGTGTCCAGAAATGTTTGTAAACAGCGATGCACTTTCAAAACATTATCGTAACATGCACAATACTGATCCAGAAAGAATGTTTAAAAGATTAAAACAGGATGAACAGAGAAGAATGCGTGGTAAACTGAATTTCTCTTGCAAGAATTGTAGGCGACAATTTTGCACTAAAACATTATATTGGAACCATATTGCAACTTGCAGACGAAATATACGAAAAGGAGAGGAAAATTTATCTTTACGAAATGACATGTTAAGTAGCCAAGAAGAATTTTTGAAGAATAATAATCAAATTAAGAAAGAAGAGCCTACATCAGATTTAAATATTCCTGATTTCAATCTTTTTGAAGATATAAATCTTCAACTCTCTGGTCAAAGACCTCTCCCGAATCTTATGCCACTCACTCAGAGAGCGAAATCTTCAATAAAATGTTCAAGAAAGGATTCCAGGAAAGTTTATGATGAATCAACAAATACAGAGTGTGCTTGTGAAGTGTGTGGAAAACAATGGCCAGCAAAGAAACATTTATGGCAACATTTAATTCGTTTCCATCGAGCGGAAGCAGCAGTTACTTGTGGAGTATGTTTGAAACTTTGTAAAGATTATGATGATTTGGCAGAACATTTGAAAGCTGCGCACGAAGCGATATTATCAACTGAAGGAAATAATTTTACATGTAAAATTTGCGGCAGGTATCACAATGCTCGTAGTAAATTGTTATTACACACAAGTATTCACATCGGCCATCCAGGTACTAGTACTTGGTGTCCAAAATGTCGGAAAAATATTACCGATGAAGCTGCACATTCGACTACGTGTAATACGAAGACGGAAGAAGGAGAACAAATGAAAAATAATGAAAAAACAGAGGGAAGTCTACTAATAGCTGATGATGCGATAATTGAAGAAGTGGAAGAAGGGGATTTTGAATCTGAAGCAGAAGAAGAAGCAGATACAGAAGAATCAGAAAGTGGTAGTAGTACCGAAGCCGAAGAGGAACATGAATCAGAGGATGAATCTAGAGCAACTGGGGAAATTACTTACAATTCAGAGAGTGAGGATTCAGAAGAACTAGATAATTTAGAAATTGATGAAAAGAACATGGAGCATTACCCTTTAAAACATCTTTCAGAATCCAAAAGTACAGAAACAAAGAAACACGATGCAAATTTATCGGATGATGATGGACCTCCTGTTCTCAGTCCCATGATGCCCCTGCTTCCTGAGAATATGTCTGTAGAACAGCCGATAAGTCATAAATTAGGCCCTATAGTGCCTCTAACTGAGAAAGACGTGTGCGATTTATCAGAGATTCGAAATCGATCCTCCCCGAAATCTGTGAATCTATATGAAAAACACTTATCTAATAACGAATCTGTAGAATTGGAATCTGAAACATTTGCAAATCGAAGCGATGAAGATTTTGAGGATACGAAGAACGAATCTGATGAAAACTTCACTGAAGAAAATGAGGAAGAGAATGAGGATAATGAGGAGATTGAGGAAAACGATGAAATAGAATTAAACGAAGATGCAGAAGAACCTGGAGATAACGAGGAAATTGAGAAAAATGGGGACAGCGGACAGATTGAAGATAACGAAGAGAATGAAGAAAACGGAGATATTGAAGAAATGGAAGAGAACGAAAGAAATGAAGAGATTGAAGAGACAGACGAAGAAAATGAGGAGAGAGAGGAGAACATGCGGTTGGATGATCTGGAAGGTGCTGTTCTAATGGTGACCGATGGGAATCAAATATTGATTCAACAAGGAATATTAGAAGACGAGAATGAAAATTCAAATCAAGAATATGTTTATTCTGCGCTTAGGTACAGTACAGAAGAGGACAGTGACGATGCAAGGAAATGA
Protein Sequence: MESRERYQELCRLCASYDAVKMDIFGQEGKNRQLVDKIQACLPFKIAENDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLSPSESNGDVTTILTCCNDSEFFEGRKSIPVLIPEAPIVNPNAALGTPPRLNSDGEADHETEEIDNSGTDEATVMDDSEDRHSEEYEMDMETNPSDFLEMTSIVAEEPEESGLKHQDVSSNLSEHTSQQHEVYVCSLCSKAFSSKGHLSLHARIHVGAGDVIGEKVLTDDHTSYKRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPAPTDVPLNNAYRPENRYQCNACGKICTDAMELNLHGRICTEGQRLDLSGKNEISDNKVVDSSEASSIGSDDDGKDYRSAEAKLAKNPQLTILKQALTKGDSLKRDFEDKFTTNCKPKKLPRTEHTDFQHTKKWYCESCPQCFTSVNDLKEHEATHDADKPFICVLCKKDFFLKSSLSRHIQTLHGVDPCPMTNAENEDDHESGQENLIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICADNTQLLNHVNMYHGGSKLLLSEQRRYSCTICGRQHDSRKKLIAHVSIHNVDPNYDPATFVQLNSNYYGENINGNETAEQMLDYEEDSDKVDCYICYKSFPNEDHLIRHQRNAHRSEQLVPAGDPLNPSSLNGGGNRAQYHLFFVCELCGSSHPSKWERWLHVSSSHSNESAIKCDREDCGKIFATKSLRNEHIQHHAIQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSTHVRSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGFEESCENGAENSENKVEGRSMRETELSCELCADLKFTSLEKLCNHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCPYCMKTSASKDHLAAHISKIHRYEPDSRKDGKDNRQFKTEEVSLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVKHMDHPDLTCNFGSCRKLFRTKEDLEAHRKDHRYHTTPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKELKSHVEEVHSSVLSRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTEDSAIRDHYETIHNIPKDQLAAFEHRLDIGSKNEDFGIESPDIIVKEEPEDLEYEVDMCDEDSSDSKRRRSLTDTYDCEMCPEMFVNSDALSKHYRNMHNTDPERMFKRLKQDEQRRMRGKLNFSCKNCRRQFCTKTLYWNHIATCRRNIRKGEENLSLRNDMLSSQEEFLKNNNQIKKEEPTSDLNIPDFNLFEDINLQLSGQRPLPNLMPLTQRAKSSIKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKDYDDLAEHLKAAHEAILSTEGNNFTCKICGRYHNARSKLLLHTSIHIGHPGTSTWCPKCRKNITDEAAHSTTCNTKTEEGEQMKNNEKTEGSLLIADDAIIEEVEEGDFESEAEEEADTEESESGSSTEAEEEHESEDESRATGEITYNSESEDSEELDNLEIDEKNMEHYPLKHLSESKSTETKKHDANLSDDDGPPVLSPMMPLLPENMSVEQPISHKLGPIVPLTEKDVCDLSEIRNRSSPKSVNLYEKHLSNNESVELESETFANRSDEDFEDTKNESDENFTEENEEENEDNEEIEENDEIELNEDAEEPGDNEEIEKNGDSGQIEDNEENEENGDIEEMEENERNEEIEETDEENEEREENMRLDDLEGAVLMVTDGNQILIQQGILEDENENSNQEYVYSALRYSTEEDSDDARK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00218574;
90% Identity: iTF_00233377;
80% Identity: -