Bdah003639.1
Basic Information
- Insect
- Bombus dahlbomii
- Gene Symbol
- E2F5
- Assembly
- GCA_037178635.1
- Location
- CM074103.1:7058712-7060590[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-30 3.4e-26 91.1 0.2 2 65 10 74 9 74 0.98
Sequence Information
- Coding Sequence
- ATGGCAGATAATCAACAAAGTAGATTTGAAAAGTCCCTTGGTCTATTAACGACTCGTTTTGTTACTTTATTACAGAAAGCAAAGGATGGTGTTCTTGATTTAAAAGTAGCAGCTGATATCTTAGAAGTTCGACAAAAACGACGAATTTATGACATTACTAACGTTCTTGAAGGTATTGGACTCattgaaaagaaaagcaaaaataGTATCCAATGGAAaGGAGCAGGTCCAGGTTGTAATACTCAAGAAGTTGGTGAAAAATTAACCGActtaaaagatgaaataaaaaaactaGAAGATCATGAACAATTATTAGATATGCATACTCAATGGATTCaacaaagtattaaaaatatagaaaatgatttaattaataggAAATATGCATATATTACTTATGAGGatgttaaagaaaattttcctgATGATTTTGTATTGGGAATTCAAGCTCCACCTGATACAGAATTAAGCGTACCAAAATATATAACACAGACATCTGAAGATgatgagaaattaaattatgaaatgttTCTAAAAAGTAGTTCTGGAGAAATTAAGGTGTACATGATTCAACCAGAACTAGCTAAAacatatgataataaaatattagaaatgaGGCTACAAGAAGAAGCAAAAGGTacaaaaagagggaaagaggaagaggagaaagTTAATGTTAAACCAAAGAGAAGAGTTGGAAgGCCCCCAAAAGGAATCAGTAAACCTGACCCTGTTATATCTGATGAAGATGAAGAGGATGATGCAGAATTAATAGAAGCAAAGATAGTACTTCGGGATGTTAGCACTTCAGatattGCTCAAAAGGACTTAGAGTTATTTGATCAAATTTATTCTGACAtttATGGACCATTAGTAAGATTAAGTCCTCCACCCAGTGAAAAAGATTACCACTTTAATCTTAGTGAAAATGAAGGAATTTGTGACTTGTTTGATATTACAGCAAAATGA
- Protein Sequence
- MADNQQSRFEKSLGLLTTRFVTLLQKAKDGVLDLKVAADILEVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGAGPGCNTQEVGEKLTDLKDEIKKLEDHEQLLDMHTQWIQQSIKNIENDLINRKYAYITYEDVKENFPDDFVLGIQAPPDTELSVPKYITQTSEDDEKLNYEMFLKSSSGEIKVYMIQPELAKTYDNKILEMRLQEEAKGTKRGKEEEEKVNVKPKRRVGRPPKGISKPDPVISDEDEEDDAELIEAKIVLRDVSTSDIAQKDLELFDQIYSDIYGPLVRLSPPPSEKDYHFNLSENEGICDLFDITAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01122228;
- 90% Identity
- iTF_00224356; iTF_00214821; iTF_00216869; iTF_00230503; iTF_00222986; iTF_00225706; iTF_00227754; iTF_00219597; iTF_00225037; iTF_00231789; iTF_00217550; iTF_00228462; iTF_00215503; iTF_00223670; iTF_00226390; iTF_00214201; iTF_00220378; iTF_00218907; iTF_00222332; iTF_00232413; iTF_00221054; iTF_00221726; iTF_00227072; iTF_00141634; iTF_00141060; iTF_00142278; iTF_00140382; iTF_00084324; iTF_00085960; iTF_00087724; iTF_00086894; iTF_00085078; iTF_00088574; iTF_01424168; iTF_00231114; iTF_00760786; iTF_00117798; iTF_01122877; iTF_01070848; iTF_00229826; iTF_01065347; iTF_01068770; iTF_01069444; iTF_01070150; iTF_01067404; iTF_01068078; iTF_01066036; iTF_01066740; iTF_00982084; iTF_01418160; iTF_01419442; iTF_00733780; iTF_01418807; iTF_01420091; iTF_00683964; iTF_01420732; iTF_00233029; iTF_00866504; iTF_00865806; iTF_00229151; iTF_01539397; iTF_00965847; iTF_00864436; iTF_00183748; iTF_00863755; iTF_00762348; iTF_00625296; iTF_00861682; iTF_00024435; iTF_00860180; iTF_00183093; iTF_00763035; iTF_00860923; iTF_00865119; iTF_00863072; iTF_01168966; iTF_00216184; iTF_00360704; iTF_00360011;
- 80% Identity
- -