Basic Information

Insect: Bombus confusus
Gene Symbol: bab2
Assembly: GCA_014737475.1
Location: JACXIV010000032.1:185901-210659[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 6e-13 1.2e-09 37.6 0.0 1 39 407 446 407 450 0.90

2 4 2.4e-12 4.6e-09 35.6 0.1 2 39 462 499 461 502 0.94

3 4 6.7e-19 1.3e-15 56.6 0.0 2 45 517 561 516 561 0.97

4 4 7.7e-19 1.5e-15 56.4 0.1 1 42 568 610 568 611 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	6e-13	1.2e-09	37.6	0.0	1	39	407	446	407	450	0.90
2	4	2.4e-12	4.6e-09	35.6	0.1	2	39	462	499	461	502	0.94
3	4	6.7e-19	1.3e-15	56.6	0.0	2	45	517	561	516	561	0.97
4	4	7.7e-19	1.5e-15	56.4	0.1	1	42	568	610	568	611	0.97

Sequence Information

Coding Sequence: ATGGTAAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAATAACTATCAGTCGAACATGACGTCTGTTTTCCACCAACTCCTTCAGACGGAAGCTTTCGTCGACGTTACCTTAGCGTGCAACGAAGCTTCTTTAAAGGCACACAAGGTGGTACTATCGGCGTGCAGTTCCTACTTTCAAAAGCTTCTACTTTCAAATCCCTGCAAACATCCGACAATCATTATGCCCCAAGATGTGTGCTTCAATGATCTCAAGTTCATCATAGAATTCGTCTATAGAGGGGAGATCGACGTTTCGCAAGCGGAACTTCAGTCACTGTTAAAAACAGCCGATCAGCTAAAGATCAAAGGACTGTGCGAGGTACCTGAAAGCAGAGACGGGCCACCATCGGTAAGTCTGAGTTCGCCGCCAAGAGAACCCGGTACTCCTAGAATAAATTTCACCAAGTTGAAGAGACATCATCCAAGGTACAAGAGGCCGAGAACCACGTTCGAACCTCGCGCTACGGATTCGAGGCATTACGATCGATACAAAGAAGAGGAATCGAACGAAAACTACGATTGGGAGAACAAAGAGAATCACATAGACTGGCAACCCGAAGATGAGGAGTGCACGGAGGCAACCGCGGGAGCAGTAGTCTTGGAAACTTGCCAACGTAGCAGTAACAATAGTACCACTACTGGCACCACCAATAATAACAACAATAATAACAACAACAACAACAACAACAATAACAACGCTAGCAGCAACGGCAACGGTAACAATACGAGCAACAACAATAACAACGGTGACATGTTTTGTCATACAGGCCTCGGTCATTACGGTCATCATCCGGATCCCGGAGAGGTTGACCTACCTCCAGAAACTCAACCTACACCACCAAGTGCCACATTGGTCGGTACTACGATTACACATTTAAGGGACCCGGATCATCATTCCACAGAGATCCAAAATTGTGACAGTGTAAAGATCAAGTTCGAGACATTGCACACAATGGATTCGTCGGACACGATCGATATCGATAGCCACATGTCGGATCGAGCGAGCGTTAGTTCAAAGAACGCGGCCGATAGCGACAACATGATGATGATCACACCGGAGTTGCTTGGATTAATGCCTTCTGGAAGTTCGGTTCACTCGGATTCCGGTGAAAATAACTCGAGGGGTCACCCCGGACAATCCAGCTCTCATCACCACGGTTCGAAATCTTGGACCCAAGAGGATATGGATGCCGCTTTGGAAGCCTTACGAAATCATGATATGAGCCTTACGAAAGCCTCCGCAACGTTCGGTATACCCTCAACGACTTTGTGGCAAAGAGCACATCGACTGGGCATCGACACTCCAAAAAAAGACGGACCTACTAAGTCGTGGAGTGACGAGAGTTTAAACAGCGCGCTAGAAGCGTTACGGACCGGAACGATATCGGCGAACAAAGCTTCAAAGGCGTTTGGTATACCGTCGAGTACCTTGTACAAAATCGCGAGAAGAGAAGGTATCAGGCTGGCTGCGCCTTTCAACGCAAGTCCCACCACCTGGTCGCCCGCTGATCTAGATCGCGCCCTCGAAGCGATACGTTCTGGTCAAACGTCAGTACAGAGAGCTTCCACAGAATTCGGTATACCGACGGGAACATTATATGGTCGATGCAAAAGAGAAGGCATCGAACTTAGTAGGAGTAATCCTACACCGTGGAGCGAGGATGCTATGACCGAAGCTCTCGAAGCTGTCAGGTTAGGCCATATGAGCATCAACCAAGCGGCTATTCACTACAATCTGCCCTACTCTTCCTTATACGGCCGCTTCAAAAGAGGAAAATACGAAGAACCAGCGGTGGGTGAAATATCGCAAGACGGTAGCAGTCCTCACTTTCATCAAAGCCCGAGTCAAAATCATTCGTCCGCCGTACCCGATCAAATGCCGTACCAAGGCAGCTGA
Protein Sequence: MVSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRPRTTFEPRATDSRHYDRYKEEESNENYDWENKENHIDWQPEDEECTEATAGAVVLETCQRSSNNSTTTGTTNNNNNNNNNNNNNNNNASSNGNGNNTSNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHPGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGEISQDGSSPHFHQSPSQNHSSAVPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00230773;
80% Identity: iTF_00216489;