Bcon015463.1
Basic Information
- Insect
- Bombus confusus
- Gene Symbol
- dl
- Assembly
- GCA_014737475.1
- Location
- JACXIV010000010.1:19250-24593[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6e-11 1.7e-07 31.1 0.0 9 42 56 89 52 90 0.95 2 3 2.9e-15 8.9e-12 45.1 0.0 102 168 90 157 88 158 0.95 3 3 1.4 4.5e+03 -2.7 0.0 18 28 167 178 166 207 0.63
Sequence Information
- Coding Sequence
- ATGTCGACAAGCCGACTAAAAAATTTTATGCCAAATGCCTCGAATTGCTTCGCCACAACCCGTTTAGCCATGCCCGTGCCAGAGCGGACGCTACATCCCCCTGGCACAAGACATGTTACCGACGGTACCACTAAGAGTCTAGTGGAAGGATCAATTGTACAGGCAAGTAAAGGCTTACGCTTTCGTTATGTATATGAAGACAGATCGATTGGTAGTATACCTGGTTTAAACAATACACCAGGAAACAAAACATTTCCTAGTATAAGAGAAAAAAAAGATATCGAGGACGCAATTAAAATAAAAGAAGAGCTTCGCATAGATTCCTTTCGAACTGGCGTCGAACATAAAAAGAGACCTACTAATATTGATTTAAATACATTGTGGTTGTGTTTCCAAGTTTTCTTAGAGAGAACACAGAAAGGAAAGTTCAATATACCATTACCATCAGTTGTATCTGATTCTATATTTGGCAAAAAGGTGATGGCAGATCTTGTGATGTGCGAGCTCGGTCGCTCTAATATGTCGGTGGCTGGTGGTACGAAAATGATTTTATTATACGAGAAGGCGGGAAAGGATGATATACAAACAACAACAGTACTGAAAACACCCACATATAGCATGCAGGAAGTGACGCAACCGGTGGAAGTATATATTCAACTGAAAAGACCATCGAATGATGTGACGAGTAAACCGTTACCTTTTTAG
- Protein Sequence
- MSTSRLKNFMPNASNCFATTRLAMPVPERTLHPPGTRHVTDGTTKSLVEGSIVQASKGLRFRYVYEDRSIGSIPGLNNTPGNKTFPSIREKKDIEDAIKIKEELRIDSFRTGVEHKKRPTNIDLNTLWLCFQVFLERTQKGKFNIPLPSVVSDSIFGKKVMADLVMCELGRSNMSVAGGTKMILLYEKAGKDDIQTTTVLKTPTYSMQEVTQPVEVYIQLKRPSNDVTSKPLPF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -