Basic Information

Insect: Bombus breviceps
Gene Symbol: Mtf1
Assembly: GCA_014825925.1
Location: CM026188.1:2388959-2392822[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 3.4e-06 0.00025 21.1 0.8 1 23 123 147 123 147 0.98

2 6 0.00025 0.018 15.3 0.2 1 23 153 177 153 177 0.95

3 6 0.00022 0.016 15.5 2.2 1 23 183 207 183 207 0.97

4 6 4.1e-06 0.00031 20.9 1.0 1 23 212 236 212 236 0.96

5 6 3.5e-05 0.0026 17.9 5.1 1 23 242 266 242 266 0.98

6 6 1.8e-05 0.0014 18.8 2.3 1 23 272 296 272 296 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	3.4e-06	0.00025	21.1	0.8	1	23	123	147	123	147	0.98
2	6	0.00025	0.018	15.3	0.2	1	23	153	177	153	177	0.95
3	6	0.00022	0.016	15.5	2.2	1	23	183	207	183	207	0.97
4	6	4.1e-06	0.00031	20.9	1.0	1	23	212	236	212	236	0.96
5	6	3.5e-05	0.0026	17.9	5.1	1	23	242	266	242	266	0.98
6	6	1.8e-05	0.0014	18.8	2.3	1	23	272	296	272	296	0.97

Sequence Information

Coding Sequence: ATGGCGGCGTGGGAAggcgaaaaatttcaagaaatcgGGAATGCCGATGATATCGAAGAGAACTTTAATAACATTCTCGTGACACATGATCTTCAAGATTGTCTGGATGATAGTTTAGATTTAACCAGTTTTGGGAAAGTGTATGAAGAAAGTAGTGTGTTTGATTACGAGAAGTATTCCGATGACGATGCTCCTATAGACGAAAAACtatcaaataataatgttaCCGAGTCAATACATTCAATCAATCCTCATGAAATTTATATGCGTATCCATTCTGGCCGAGATGATATTTCAACAAGTAAATCTTCAACTACTGCAATTCAAAGCATAGTTCCAGATGCAAATCAGAAGCATATTGGTCGATATACCTGTGAATATGAAGGCTGTAATAGGACATATAGTACAGTTGGTAATCTACGTACCCATATGAAAACACATAAAgGCGAGTATCGATTTAAATGTGCAGAACCAAGTTGTGGCAAGGCATTTCTTACGTCGTACAGCCTTAAGATTCATATTAGGGTACACACAAAAGTGAAACCATTTGAATGCAACCACAAAGGCTGTGAAAAAGCATTCAATACCCTTTACAGACTGAGAGCTCACCAAAGACTTCACAGTGGCAACACATTTAATTGCGAAGAGACTGGATGCGTTAAATTTTTCACTACTCTAAGTGATCTCAAGAAACATATACGTACTCATACTCAAGAAAGACCTTACAAatgTAGGGAAAAAGGATGTGGCAAGGCTTTTACAGCATCACATCATTTGAAAACGCACAGAAGAACACATACGGGAGAACGACCTTATGTATGTAGTGTAGGCAGCTGCAAACGATCCTTCACCACACCTCATAGTTTAAAGAGTCACTTGAAGACTCATAAGAGAACGACTGATATCGACGAAACGAAACATGAAGTCAATAAAGATGATTACAGAAACCAAAGAAACAATGAGATATTGAAAACCGAAATCGATGTTGATGAAATAACGTCGAGAAATACAAATGTGCCATGTTATGCCATTATACCGTTATCTTCTAGCAATACACAAAATAAGGAAAGTATTACTTATTTATCTATTGAAAATCCAAATGATCAGTCATCTTCTACAAATGATGTGATAGATATCTTAAATCAAAACAGACTAACCAAAGAACTTGACTATAACATCACTAACAAAGATgctgaaaatttaaataagtcGACAAATGTCACTGTTCTTGCGTCGGAAAATATTGTCATAGATAATTTTACCGAGCATacaattgataattttaataataatgacagttatgacaaatttaaaatattcaatgaagtaaataattcgaatttaCAACGGGATCAAAATCAACAATATAGTTCTAATCCTTCAACGAAAGTGCAAGATAGCAAGgcaaataatacaaataagtccaattcaataaatttggagcaaaaaattatacaagacAGTCTACAAAATACTATTGTTCACATCTCAGAAGGAACGAATTTTACAAGTGATGTGCAACAATATGTAAATGATAATACTGTTGCTAAGAAAgtttatgataataaaacaaatgtaaGTGCGGTTGCTGAAAACAATAATGCGACTTTGTACGACACAAATTCTGTTACTAGTCatgtatcaaatataattagttCCTCTAGTGAGACTCAACTCTTTGATAGTGAGATAGGaaatttaccatttattaATGATAGTTTACGAACTGGATCTCTTAATGAAGTTGAACATGTATTGAATTGTAATGTTATTACAACTACGCAGTCGGAAGCTATTGAACTAGCGATAGCATCCGAGGAGGAAATACCTTCTCCCTGGATAGATGTCATGGCATTGGCAACCCCATCTGCTTTAAGGCGGCAATCCTGGTCGGAATTGAACGCTTTTCCAACAGCGGTTCACTCATTAGTCGACTTAGTTGAACCGGAACCGTATCCTTTACAGATAGAAAATGACTTGCAACCACTACaagtaaataatgtaaatttagtAGACGTGGAAAACATTAATACCGAATGTACCGAAGTCACACGTTGTAAAGAGAAcgataaagataaagaaagcgaaaatagaataaaaataaaaaaaagtagaaatatcCTACAAGAGATTACAGCCGAAGCAGATATATGCAAATGTATTGATTGTAAATGCGATCATCtacaaaattgtcaaaattgCTCAAACAATACAATTCctgaaatgaataaaaagcaCGTTTCATCGAAAATAGTAGATGATTTAGTGTCTTGTTTACAAAGCGAATGTGTTTGCGACAATGAGCCCGGTGGTTGTGGGTCTTGTTGTGTTGTGATTTGTTTAAAAACGTTGCAGCAATTGCAAAAAGTATTCAGTCGTAATTGCTGTAAAAGTACTAACAGTATAACATGTTGtagagaaaaattgttatccCCATTAATGAAGTGCCAGTTAACGAAAAACCAATGA
Protein Sequence: MAAWEGEKFQEIGNADDIEENFNNILVTHDLQDCLDDSLDLTSFGKVYEESSVFDYEKYSDDDAPIDEKLSNNNVTESIHSINPHEIYMRIHSGRDDISTSKSSTTAIQSIVPDANQKHIGRYTCEYEGCNRTYSTVGNLRTHMKTHKGEYRFKCAEPSCGKAFLTSYSLKIHIRVHTKVKPFECNHKGCEKAFNTLYRLRAHQRLHSGNTFNCEETGCVKFFTTLSDLKKHIRTHTQERPYKCREKGCGKAFTASHHLKTHRRTHTGERPYVCSVGSCKRSFTTPHSLKSHLKTHKRTTDIDETKHEVNKDDYRNQRNNEILKTEIDVDEITSRNTNVPCYAIIPLSSSNTQNKESITYLSIENPNDQSSSTNDVIDILNQNRLTKELDYNITNKDAENLNKSTNVTVLASENIVIDNFTEHTIDNFNNNDSYDKFKIFNEVNNSNLQRDQNQQYSSNPSTKVQDSKANNTNKSNSINLEQKIIQDSLQNTIVHISEGTNFTSDVQQYVNDNTVAKKVYDNKTNVSAVAENNNATLYDTNSVTSHVSNIISSSSETQLFDSEIGNLPFINDSLRTGSLNEVEHVLNCNVITTTQSEAIELAIASEEEIPSPWIDVMALATPSALRRQSWSELNAFPTAVHSLVDLVEPEPYPLQIENDLQPLQVNNVNLVDVENINTECTEVTRCKENDKDKESENRIKIKKSRNILQEITAEADICKCIDCKCDHLQNCQNCSNNTIPEMNKKHVSSKIVDDLVSCLQSECVCDNEPGGCGSCCVVICLKTLQQLQKVFSRNCCKSTNSITCCREKLLSPLMKCQLTKNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00140814;
90% Identity: iTF_00216612;
80% Identity: -