Basic Information

Insect: Boloria selene
Gene Symbol: Sall1_2
Assembly: GCA_905231865.2
Location: HG993142.1:11778229-11788864[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.9 6.5e+02 1.8 0.2 2 23 6 27 5 27 0.93

2 13 0.022 2.1 9.6 0.1 1 23 1084 1107 1084 1107 0.91

3 13 0.09 8.4 7.7 0.0 1 23 1184 1206 1184 1206 0.98

4 13 5.4e-06 0.0005 21.0 2.3 2 23 1209 1230 1208 1230 0.96

5 13 0.00068 0.063 14.4 2.4 1 23 1236 1258 1236 1258 0.98

6 13 0.0055 0.51 11.5 3.4 2 23 1265 1286 1264 1287 0.95

7 13 0.045 4.2 8.6 0.4 5 23 1300 1318 1298 1318 0.97

8 13 0.029 2.7 9.3 1.0 3 23 1325 1346 1324 1346 0.96

9 13 0.00017 0.016 16.3 0.5 1 20 1386 1405 1386 1408 0.94

10 13 0.00086 0.081 14.0 1.1 1 23 1416 1438 1416 1438 0.99

11 13 0.0052 0.49 11.6 7.2 1 23 1444 1466 1444 1466 0.98

12 13 1.3e-05 0.0012 19.8 1.2 1 23 1472 1496 1472 1496 0.98

13 13 0.00064 0.06 14.5 4.9 1 23 1502 1524 1502 1525 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.9	6.5e+02	1.8	0.2	2	23	6	27	5	27	0.93
2	13	0.022	2.1	9.6	0.1	1	23	1084	1107	1084	1107	0.91
3	13	0.09	8.4	7.7	0.0	1	23	1184	1206	1184	1206	0.98
4	13	5.4e-06	0.0005	21.0	2.3	2	23	1209	1230	1208	1230	0.96
5	13	0.00068	0.063	14.4	2.4	1	23	1236	1258	1236	1258	0.98
6	13	0.0055	0.51	11.5	3.4	2	23	1265	1286	1264	1287	0.95
7	13	0.045	4.2	8.6	0.4	5	23	1300	1318	1298	1318	0.97
8	13	0.029	2.7	9.3	1.0	3	23	1325	1346	1324	1346	0.96
9	13	0.00017	0.016	16.3	0.5	1	20	1386	1405	1386	1408	0.94
10	13	0.00086	0.081	14.0	1.1	1	23	1416	1438	1416	1438	0.99
11	13	0.0052	0.49	11.6	7.2	1	23	1444	1466	1444	1466	0.98
12	13	1.3e-05	0.0012	19.8	1.2	1	23	1472	1496	1472	1496	0.98
13	13	0.00064	0.06	14.5	4.9	1	23	1502	1524	1502	1525	0.96

Sequence Information

Coding Sequence: ATGGATCAAAGAGTTCAGTGCCCTGTGTGTACACTGTACCTTCACAGTGGAATGTCATTAGCATCACATTTGGATACACATCCAAAAGATCAAATGATTAAAGCATTGTGTAGTCTGTCAGCAAAAACTATTAATTTTGGTAGTAGAAGTACTACGCCATTAAATTCTGAAAGATCATTTAGAAGCAGGTCACGGACCCCAGTAACAGATGACAGTGGTCGATGGGGTAACTCACATCGTAATAGTGATAATGACAGATATTGGAGGAGAACACCTAGTAGAAAAAAATCAACCCCAATTTCAAGCACTTCAAGGAATCTTACTCCAGATATAAGAATTGAAAATGTGTCATTTGAGAATCCTCTCTCCAATAACAACTCCAATCATGATTCTGATTCATTTACTATAAAGTCTGATAAAACACAGAAGACATTTGGTTCTAATGGACAGTTATCAGTTTCTGATTATGATCCACAATTTCGTTTCTATCCAGAGCAACAGGATGATACAGAGATAAAGTTTTCAAGGAGTTCAGATTATAGTGCACAAGTTGAGAATTCTAATCCTATATTAGGATATAATGTGCCCATAATGGGGCCAGGAGTAAAATTTCCAACAGGCATGATGCCAACAGTACCTAGAAGGGTTGGTGATTTTGCCAAGACTCAACCTAAACAAGGAAACTTACTGTTAAAAACTAATATGAGTGGCATGCAATATGTATCTCCAGGAGCAAAACCTATACATGTAATGATGCCAACCCCACCATCATTTGTTCAAAAAAATTTACAAAATAATGTGCTTAATGCAGGAAGTATGTCAGGATCTCCTATGCTAAATCCAAAACACATGATGCCACCAATGAATCCTCTTAGTAGTCATGTTAACCCTCTAAATGCTGGAGCATTCACTCCTGGAACTACTGTTGTTACACAAAATTCGCAAATAATCTATAGAGAGATGGTCCATAATAAACCTTATATGTCAAATATGCCACCTACACTTGGAGGTCATGAAACTGTCACAAATGTGGCTCAAAGTAGTTCTATGTATCAAAATGTGATGTTTGTTGATCAATTTGGTAATACTTCTTGCATGTACACTACACCACAACATTTGTTACCAAAACCACCCATGTTTAATGAGAGTATTCTACCATACATGCAAAATATGCCTGGAAAATCTGCACAAAATGCAAAAAAAACCCTTATCATTGAAGTCAGCCCTATGTCAACAACTGCACCAAAAACTGCCAATGAAAAATATCAAAATTCACACCCTTCGCAACAGAGTATGAATTGTATAAATAAAAAGCCTGAGAAAAAAAGGAATGTGAAGAATGTGATTGATGTTAATCAACATGGTAATTCTTCTTGCATGTACACAACATCACAAAATTTGTTACAAAAACCATGCAGTTCTTCTATGTTTAATGAGAGTATTCCACCATACATGCAAAATATGTCTAATAAAACTGCACAAAGTGTTAAAGATTCAAATAAAACCCTAATAATTGAAGTAAGTCCAGTGTCATCAGATGTATCAATAAGTACAGATGAAGAATGTCAAACTTCACAACAAAATACAAAACCTATGAATAAAAAGTATAAGAGAAAAAAGAATGACCATAAAACTATGTCACCAGGACCAAGTAAAGGGCTAAAAATTATAAGTAATGTAAAGGTGGAAGTTCCTGCACAAATTCATAAGAATATGCTTAACAATGCTATGGACCTGCCAAGCTCATTAGATACTGATTATCCAGAGCCCTCAATTACTCCTGAGAAAATTTTACCAGATTTAGATGATGATAGCCCAGTTTTAATTATTGATAAATGCACTGAACGGTCAAGTGTGAATGTAGAAAGCATTACATCAAATACATTTGCAACAATAAATAGTTCATCAAATCTATCATATAAGGATTTATCCCCCAAATCTATTCCTGTTGAAACTAAACCAGATACAGAACTTTCAGACAGCTGCCCAGTTCCAGATCTAATTTGCAATGAAAAACCATCTATATCTCCTTGTAGTGAGCTATCCGAACAAGGTGATAATTCTATTGATCGCACATTGCTAATACCAAGACCTGAAAGTAGTCGACCATACCAATGTTCGCCAAGTAATAGTATTGACATTGTTAAGAAACCTAGTAAAACTCAAAGAAATAATGCTCTTAAGCACAATAATATTTTTGTGAAAAAACAAAAAAAAATTCTGCAAATAAAGAATTCCAAATTAGGTCCATCAGAAAGAAATGGCCAAACAGAGCAAGAGGTAAAAGCGTCTTCGTCTTCATTTCGTAAATCACCAGAAAAATGTTCAATAGCAAAAAACCGTCAGCCATCATCGATAGGAGAAACAAAACCCTCATTGCAACCTATTAATATTGAAAAAATTATAGCTAATAATGTTGACGATCATAACGAAATTGATGCTAATACAGAGGAGCAGTCGATGGATATTGAACCAGTAACTCCGTCCAACATGACCCATTCCAATCAATTTTCCAGCAGTGGATGTATGGTAAAAATTAAAGAAGAAATAAGCTCTAGTAATGAGTTAAGTAATGAAGCTGTAAAATCCCCTGTGGATATTGCTCCAATGGAGACACTTCGACCCATTAACGTCGTCAATTATAGTAACATGGCAGATTTTGATGAAGATTCAAATCATAAAGAGCTGTTAGAATTAGATGCTACTTCAAAAAATAAGCAATTCGTATCCATGATGAACGAAAATTATTTTGGAGACAATATTTATGCAGATTATTTCACTCCTGACCGTGGGGAGACTTTCGAAGCTCAAAAAGAATCAAATTACGCTTGGGGAGAGCCGTCACAGAAAGAAAGTGAATTTGTTTTGCCCAATTTTATTCATGAGAGTTACAAAATAGCGGATAGTAATGGTATGGATTATTCCGATGTAGGAGCGGAGATTGAAAAGGTAGATGGAGATGGGGACAAATGTGAAAGAGATAGTAAGGCAGATGTGTTGAGTGAGGGTGAGCCGCCTCTAAACATATGTGCAGATGAAAGAATGCCACCTAGAGGAGAAATAAGTGGGCAGGAGAGCAATGGAGATATGGACTCACATTGGAGCGGGATGTATTCTGGAGTTCCTCCAGCGGAACCTTACGATCTAATGGCGCGGGAAAGTTGGGTGTCAGATGGGTCCGACGTCGAAGTAAATGAGAAAAAGGAAAGTAATATAGAGGAGAGTCTTCGTTTTCCCAAGGCTCGTATGTTCAATTGTGCCCAATGTGGAGGAAAGTTCCCATCGCTTAAAGAATTACGTGCTCATAAAGCATTAGTTCATGCATTACCAACTTGTTCCAACTCAAAGACATCTTACAGCCGCCTCATGACAGCTCGGGCTATTAAGAAAGAGGAAAAACAATATGAACATGTTTTGCCAGGAAGCCTATCATTGGACTCTAAAGAAAACATAGAGTCAGCATTGCTTCAAGCTTACAACCAATTTGCAGCAAGACCTAAAGTTGAGAGATTACTAAAGCTTAAACAAACTAAGAAGAGGCAGAATAGTTTTGTGTGTCCAACATGTAGAGTAGACTTCATAACGGGTCCAGCGTTCAACGATCATCTCAAGATACATCCCCTCGAGTGTCTGACTTGTGGAAAGTGTTTCACCCGAAAAGCCAATCTAGCCCTACACACGAAGACACATTTGGGGATAAAGAACCATAAATGTGATATATGCGAGAAGGGTTTCATAACGCGGCAGAAGCTGGCAGAGCACCACAACGTACACACGGGCCGCACGCCCATCAAGTGCACGCTATGCGACGACACTTTCCGCAGATACTCCAATATGGTTCAGCATAGGAACAGACACCATTTCAAGAAGAAAGCAAAGATCCGAGACTTCGTGTGCCACTGCGGGTTGGTGTTCCCGTCGCGAGCCAAGCTGCTCTGGCACAAAGAAACCCATGAAGAGAAGCCCAAAGCGTGCCTCTACTGTAGCGACAAGTTCGTGCACGCGGCGTTGCTCACTCGCCACGTGCGCCGCACACACAATGAGCACTTCATCAGCGGGCAGAGCAAGGAGAACGTGCCTTGTCCGATTTGTAAGCAGATACACTTACGATCGAAAATGCGCGCCCATATACAAACGCATAGCGGGCAGCGGCCCTACAACTGCGTCATATGCAACAAGGGTTTCACCACCAAGTGGAACCTGAAGCTGCACCGCTGGATCCACCTCAGCCGTTCCGCCAAGCCCTACAAATGCAACCTCTGTAAAAGTGCCTTCGTAAGACACCCCGAATACATCGCACACATGAACAGTCATAAGTCAGTCCGGCCCTACACCTGCAACTACTGCGGCTGTCAGTTCATCAGGAAATACAACTGTCAACGTCACGTCCGGGAACACGAAATGGCAAAGAAGTATGTGTGTAAAGTGCCAGAATGTGGTAAAATGTTTCATAGAAGTTATTATCTATCGGAACATATGAAAGTGCATAGTGGTGTGCGTCCGTACTCCTGCAATATATGTGGGAAGACTTCCAGTAATAAATCAAATCATAATAAGCATGTGAAGATCCACCATGCTCGTGAACCAGTGGCCACTGAAGCATAG
Protein Sequence: MDQRVQCPVCTLYLHSGMSLASHLDTHPKDQMIKALCSLSAKTINFGSRSTTPLNSERSFRSRSRTPVTDDSGRWGNSHRNSDNDRYWRRTPSRKKSTPISSTSRNLTPDIRIENVSFENPLSNNNSNHDSDSFTIKSDKTQKTFGSNGQLSVSDYDPQFRFYPEQQDDTEIKFSRSSDYSAQVENSNPILGYNVPIMGPGVKFPTGMMPTVPRRVGDFAKTQPKQGNLLLKTNMSGMQYVSPGAKPIHVMMPTPPSFVQKNLQNNVLNAGSMSGSPMLNPKHMMPPMNPLSSHVNPLNAGAFTPGTTVVTQNSQIIYREMVHNKPYMSNMPPTLGGHETVTNVAQSSSMYQNVMFVDQFGNTSCMYTTPQHLLPKPPMFNESILPYMQNMPGKSAQNAKKTLIIEVSPMSTTAPKTANEKYQNSHPSQQSMNCINKKPEKKRNVKNVIDVNQHGNSSCMYTTSQNLLQKPCSSSMFNESIPPYMQNMSNKTAQSVKDSNKTLIIEVSPVSSDVSISTDEECQTSQQNTKPMNKKYKRKKNDHKTMSPGPSKGLKIISNVKVEVPAQIHKNMLNNAMDLPSSLDTDYPEPSITPEKILPDLDDDSPVLIIDKCTERSSVNVESITSNTFATINSSSNLSYKDLSPKSIPVETKPDTELSDSCPVPDLICNEKPSISPCSELSEQGDNSIDRTLLIPRPESSRPYQCSPSNSIDIVKKPSKTQRNNALKHNNIFVKKQKKILQIKNSKLGPSERNGQTEQEVKASSSSFRKSPEKCSIAKNRQPSSIGETKPSLQPINIEKIIANNVDDHNEIDANTEEQSMDIEPVTPSNMTHSNQFSSSGCMVKIKEEISSSNELSNEAVKSPVDIAPMETLRPINVVNYSNMADFDEDSNHKELLELDATSKNKQFVSMMNENYFGDNIYADYFTPDRGETFEAQKESNYAWGEPSQKESEFVLPNFIHESYKIADSNGMDYSDVGAEIEKVDGDGDKCERDSKADVLSEGEPPLNICADERMPPRGEISGQESNGDMDSHWSGMYSGVPPAEPYDLMARESWVSDGSDVEVNEKKESNIEESLRFPKARMFNCAQCGGKFPSLKELRAHKALVHALPTCSNSKTSYSRLMTARAIKKEEKQYEHVLPGSLSLDSKENIESALLQAYNQFAARPKVERLLKLKQTKKRQNSFVCPTCRVDFITGPAFNDHLKIHPLECLTCGKCFTRKANLALHTKTHLGIKNHKCDICEKGFITRQKLAEHHNVHTGRTPIKCTLCDDTFRRYSNMVQHRNRHHFKKKAKIRDFVCHCGLVFPSRAKLLWHKETHEEKPKACLYCSDKFVHAALLTRHVRRTHNEHFISGQSKENVPCPICKQIHLRSKMRAHIQTHSGQRPYNCVICNKGFTTKWNLKLHRWIHLSRSAKPYKCNLCKSAFVRHPEYIAHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKMFHRSYYLSEHMKVHSGVRPYSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00212828;
90% Identity: iTF_00212828;
80% Identity: -