Basic Information

Insect: Boloria euphrosyne
Gene Symbol: Sall1
Assembly: GCA_951802675.2
Location: OX637881.1:12211742-12222713[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 7.5 7.4e+02 1.8 0.2 2 23 6 27 5 27 0.93

2 15 8.9 8.9e+02 1.5 0.1 5 19 723 737 722 740 0.90

3 15 0.024 2.4 9.6 0.1 1 23 1091 1114 1091 1114 0.91

4 15 0.072 7.1 8.1 0.3 1 23 1191 1213 1191 1213 0.98

5 15 1e-06 0.0001 23.3 2.0 2 23 1216 1237 1215 1237 0.97

6 15 0.00013 0.012 16.8 1.0 1 23 1243 1265 1243 1265 0.98

7 15 0.0064 0.63 11.4 3.4 2 23 1272 1293 1271 1294 0.95

8 15 0.049 4.8 8.6 0.4 5 23 1307 1325 1305 1325 0.97

9 15 0.021 2.1 9.8 0.7 3 23 1332 1353 1331 1353 0.96

10 15 0.076 7.5 8.0 0.1 2 23 1367 1387 1366 1387 0.97

11 15 0.00018 0.018 16.3 0.5 1 20 1393 1412 1393 1415 0.94

12 15 0.0007 0.069 14.4 1.1 1 23 1423 1445 1423 1445 0.99

13 15 0.0056 0.56 11.6 7.2 1 23 1451 1473 1451 1473 0.98

14 15 7.7e-06 0.00076 20.6 1.4 1 23 1479 1503 1479 1503 0.98

15 15 0.00069 0.068 14.5 4.9 1 23 1509 1531 1509 1532 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	7.5	7.4e+02	1.8	0.2	2	23	6	27	5	27	0.93
2	15	8.9	8.9e+02	1.5	0.1	5	19	723	737	722	740	0.90
3	15	0.024	2.4	9.6	0.1	1	23	1091	1114	1091	1114	0.91
4	15	0.072	7.1	8.1	0.3	1	23	1191	1213	1191	1213	0.98
5	15	1e-06	0.0001	23.3	2.0	2	23	1216	1237	1215	1237	0.97
6	15	0.00013	0.012	16.8	1.0	1	23	1243	1265	1243	1265	0.98
7	15	0.0064	0.63	11.4	3.4	2	23	1272	1293	1271	1294	0.95
8	15	0.049	4.8	8.6	0.4	5	23	1307	1325	1305	1325	0.97
9	15	0.021	2.1	9.8	0.7	3	23	1332	1353	1331	1353	0.96
10	15	0.076	7.5	8.0	0.1	2	23	1367	1387	1366	1387	0.97
11	15	0.00018	0.018	16.3	0.5	1	20	1393	1412	1393	1415	0.94
12	15	0.0007	0.069	14.4	1.1	1	23	1423	1445	1423	1445	0.99
13	15	0.0056	0.56	11.6	7.2	1	23	1451	1473	1451	1473	0.98
14	15	7.7e-06	0.00076	20.6	1.4	1	23	1479	1503	1479	1503	0.98
15	15	0.00069	0.068	14.5	4.9	1	23	1509	1531	1509	1532	0.96

Sequence Information

Coding Sequence: atGGATCAAAGAGTTCAGTGCCCTGTGTGTACACTGTACCTTCACAGTGGAATGTCATTAGCATCTCATTTGGATACACATCCAAAAGATCAAGTGATAAAAGCATTGTGTAGTCTGTCAGCAAAAAATTATGGAAGCAGAAGTACTACTCCATTAAATTCAGAGAGGTCATATAGAAGCAGGTCACGGACCCCAGTAACCGATGACAGTGGAAGATGGGGTAACTCACATCGTGATAGTGACAGATATTGGAGGAGGACACCCAGTAGAAATAAATCAACTCCACTTTCAAGCACTTCCAGGAATCCTACTCCAGATATAAGAATTGGAAATGTGTCATTTGAGAACCCTCACTCTAATAACAACTCCAATCATGGTTCTGATTCATTTACAATAAAGTCTGATAAAACACAGAAGACATTTGGTTCTAATGGACAGTTATCAGTTTCTGATTATGATCCACAATTTCCTTTCTATCCAGAGCAACAGGATGATACAGAGATAAAGTTTTCAAGGAGTTCAGATTATAGTGCGCAAGTAGAGAATTCTAATCCTATATTTGGATATAATATGCCCGTAATGGGGCCAGGAGTAAAATTTCCAACAGGCATGATACCAACAGTACCTAGAAGGGGTGGTGATTTTACCAAGATTCTACCTAAACAAGGAAACTTACTTGTAAAAACTAATATGAGTGGCATGCAATATGTATCTCCAGGATCAAAACCTATGCATGTAATGATGCCGACCCCACCATcatttgtacaaaaaaaattacaaaataatgtcCTTATGACAGGAAATATGCCAGGAAATATGCCAGTATCTCCTATGATAGATCCAAAACACATGATGCCACCAATGAATCCTCTTAGTAGTCACGTTAACCCTATAAATGCTGGAGCATTCACTCCTGGAACTACTGTTGTTACACAAAATTCACAAATAATCTATAGAGAGATGGTCCATAATATAGATGGTAAACCTTATATGTCAAATATGCCACCTACACTTGGAGGTCATGGGACTGTCACAAATGTGGCTCAAAGTAGTTCTATGTATCAAAATGTGATGGTTGTTGATCAATTTGGTAATACTTCTTGCATGTACACTACACCACAACATTTGTTACCAAAACCTCCTATGTTTAATGAGAGTATTCTACCATGCAAGCAAAATATGCCTGTAAAAACTGCACAAAATGTAGTCTATGATGCAAAAAAAACCCTTATTATTGAAGTTAGCCCTATGTCATCAAGTGCACCAAAAACTGCCAATGAAAAAAGTCAAAATTCACAGCCTTCGCAACAGAGTATGAATTCTATGAGTAAAAAGCCTGAGAAAAAAAAGAATGTGAGGAATATGATGGATGTTAATCACCATGCTAATTCTTCTTGCATGTACACTACACCACAAAATTTGTTACAAAAACCATGCAGTTCTTCTATGTTTAATGAGAGTATTCCACCATACATGGAAAATCtgaataaatctaataaaactGCACAAAGTATTAAAGATTCTAATAAAACCCTAGTTATTGAAGTAAGTCCTGCGTCATCAGATGTGTCAATAAGTACAGATGAAGAATGTCAGAATTCACAACAGAATACAAAACCTGTGAATAAAAAGCTTAAGAAAAAGAAGAATGATCATAAAACTATGTCACCAGGACCAAGTAAAGgtctaaaaattataagtaatgtaAAGGTAGAAGTTCCTGTACAAAATCATAAGAATATGCTTAACAATGCAATGGACCTGCCAAACTCAACAGATTCTGATTATCCAGAGCCTTCAATTACTCCAGAGAAAATTTTACCAGATTTAGATGATGATAGCCCAGttttaattattgataaatgCAATCAACGGTCAAGTGCTAATGTAGAAACCCTTACATCAAATACATTTGCAACAGTAAAAAGTTCATCAAATCAATCATATAAGGATTTATCCCCCAAACCTATTCTTGTTGAAACTAAACCAGATACAGAACTTTCAGACAGCTGCCCAGTTCCTGACcttatttgcaatgaaaaaccATCTATATCTCCTTGCAGTGAGCTATCCGAACAAGGTGATAATTCTATTGATCACACATTGCTAATACCAAGACCTGAAAGTAGTCGACCATACCAAAGTTCGCCAAGTAATAATATTGACATTTGCAAAAAACCTAGTAAAACACAAAAGAATGCCCTTAGgcacaataatatatttgtgaaaaaacaaaaaaaagttctGCAAATAAAGAATTCTAAATTAGGTCCACCAGAAAGAAATGGTCAAACAGATCTAGAGGCAAAAGCGTCTTCGTCTTCATTTCGTAAATCACCTGAAAATTTTTCAATAACGAAAAACCGTCAGCCATCATCAATAGGGGAGACAAAACCCTCATTACAAcctattaatattgaaaaaattaaagCCAATACTGTCGACGATCGTAACGAATTTGACGCTAACACAGAGGAACAGTCGATGGATATTGAACCAGTAACTCCGTCCAACATGACCCACTCCAATCAATTTTCTAGCAGTGGATGTATGGTACAAATTAAAGAAGAAGTAAACTCAAGTAATGAGTTAAGTAATGAAGCTGTAAAATCCCCTGCGGTTATTGCTCCAATGGAGGCACTTCGACCTATTAACGTCGTCAATTATAGTAACATGGCGGATTTTGACGACGATTCAAATCATAAGGAGCTGTTAGAATTAGACGCTACTTCAAAAACTAAGCAATTCGTATCCATGATGAACGAAAATTATTTTGGTGACAATATTTATGCAGATTATTTCACTCCTGACCGAGGAGAGACTTTCGAAGCTCAAAAAGAATCAAATTACGTTTGGGGAGAGCCGTCACAGAAAGAAAGTGAATTTGTATTGCCCAATTTTATTCATGAGAGTTACAAAATAGCGGAAAGTAATGGTATGGATTATACTGATGTAGGAGCAGGGATTGAGAAGGCAGATGGAGATGGAGACAAATGTGAAAGAGATAGTAAGGCAGATGTGTTGAGTGAGGGTGAGCCACCTCTAAACATATGTGCAGATGAAAAAATGCCGCCTAGAGGAGAAATAAGTGGGCAGGAGAGCAATGGAGATATGGATTCACATTGGAGTGGGATGTTATCTGGAGTTCCTCCAGCGGAACCTTACGATCTAATGGCGCGGGAAAGTTGGGTGTCAGATGGGTCCGACGTCGAAGTAAATGAAAAAAGGGAAAATATAGAGGAGAGTCTTCGTTTTCCCAAGGCTCGTATGTTCAATTGTGCCCAATGTGGAGGAAAGTTCCCATCGCTTAAAGAATTACGTGCTCATAAAGCATTAGTTCATGCATTACCAACTTGTTCCAACTCAAAGACATCTTACAGCCGCCTCATGACAGCTCGGGCTATTAAGAAAGAGGAGAAACCATATGAACATGTTATGGCAGGAAACCTATCATTGGACTCTAAAGAAAACATAGCGTCAGCATTGCTTCAAGCTTACAACCAATTTGAAGCAAGACCCAAAGTTGAGAGATTACTAAAACTTAAACAAATTAAGAAGAGGCGGAAAAGTTTTATGTGTCCAACATGTAAAGTAGACTTCATAACGGGTCCAGCGTTCCACGCTCATCTCAAGATACATCCTCTCGAGTGTCTGACTTGTGGAAAGTGTTTCACCCGAAGAGCCAATTTAGCCCTACACATGAAGACACATCTGGGGATAAAGAACTATAAGTGTGATATATGCGAGAAGGGCTTCATCACGCGGCAGAAGCTGGCGGAGCACCACAACGTGCACACCGGCCGCACGCCCGTCAAGTGCACGCTCTGCGACGACACCTTCCGCAGATACTCCAACATGGTTCAGCACAGGAACAGACACCACTTCAAGAAGAAAGCGAAGATCCGCGACTTCGTGTGCCACTGCGGGCTGGTGTTCCCGTCGCGCGCCAAGCTGCTCTGGCACAAGGAGACGCACGACGAGAAGCCCAAGGCGTGCGCCTACTGCAGCGACAAGTTCGTGCACGCGGCGCTGCTCACGCGCCACGTGCGCCGCACGCACAACGAGCACTTCGTCGGCAGGCAGAGCAAGGAGAACGTGCCTTGTCCGATCTGTAAGCAGaTATACCTACGATCGAAAATGCGTGCCCATATACAAACGCACAGCGGCAAGCGGCCCTACAACTGCGTCATCTGCAACAAGGGCTTCACCACCAAGTGGAACCTGAAGCTGCACCGCTGGATCCACCTCAGCCGCTCCGCCAAGCCCTACAAATGCAACCTCTGTAAGAGCGCCTTCGTACGACACGCCGAATACGTCGCACACATGAACAGCCATAAGTCAGTCCGGCCCTACACCTGCAACTACTGCGGCTGTCAGTTCATCAGAAAATACAACTGTCAACGTCACGTCCGGGAACACGAAATGGCCAAGAAGTATGTGTGTAAAGTGCCAGAGTGCGGTAAAACGTTTCATAGAAGTTATTATCTATCGGAACATATGAAAGTGCATAGTGGTGTGCGTCCGTACTCCTGTAATATATGTGGGAAGACTTCCAGTAATAAATCAAATCATAACAAGCATGTCAAGATCCACCATGCTCGAGAACCTGTGGCGACGGAAGCATAG
Protein Sequence: MDQRVQCPVCTLYLHSGMSLASHLDTHPKDQVIKALCSLSAKNYGSRSTTPLNSERSYRSRSRTPVTDDSGRWGNSHRDSDRYWRRTPSRNKSTPLSSTSRNPTPDIRIGNVSFENPHSNNNSNHGSDSFTIKSDKTQKTFGSNGQLSVSDYDPQFPFYPEQQDDTEIKFSRSSDYSAQVENSNPIFGYNMPVMGPGVKFPTGMIPTVPRRGGDFTKILPKQGNLLVKTNMSGMQYVSPGSKPMHVMMPTPPSFVQKKLQNNVLMTGNMPGNMPVSPMIDPKHMMPPMNPLSSHVNPINAGAFTPGTTVVTQNSQIIYREMVHNIDGKPYMSNMPPTLGGHGTVTNVAQSSSMYQNVMVVDQFGNTSCMYTTPQHLLPKPPMFNESILPCKQNMPVKTAQNVVYDAKKTLIIEVSPMSSSAPKTANEKSQNSQPSQQSMNSMSKKPEKKKNVRNMMDVNHHANSSCMYTTPQNLLQKPCSSSMFNESIPPYMENLNKSNKTAQSIKDSNKTLVIEVSPASSDVSISTDEECQNSQQNTKPVNKKLKKKKNDHKTMSPGPSKGLKIISNVKVEVPVQNHKNMLNNAMDLPNSTDSDYPEPSITPEKILPDLDDDSPVLIIDKCNQRSSANVETLTSNTFATVKSSSNQSYKDLSPKPILVETKPDTELSDSCPVPDLICNEKPSISPCSELSEQGDNSIDHTLLIPRPESSRPYQSSPSNNIDICKKPSKTQKNALRHNNIFVKKQKKVLQIKNSKLGPPERNGQTDLEAKASSSSFRKSPENFSITKNRQPSSIGETKPSLQPINIEKIKANTVDDRNEFDANTEEQSMDIEPVTPSNMTHSNQFSSSGCMVQIKEEVNSSNELSNEAVKSPAVIAPMEALRPINVVNYSNMADFDDDSNHKELLELDATSKTKQFVSMMNENYFGDNIYADYFTPDRGETFEAQKESNYVWGEPSQKESEFVLPNFIHESYKIAESNGMDYTDVGAGIEKADGDGDKCERDSKADVLSEGEPPLNICADEKMPPRGEISGQESNGDMDSHWSGMLSGVPPAEPYDLMARESWVSDGSDVEVNEKRENIEESLRFPKARMFNCAQCGGKFPSLKELRAHKALVHALPTCSNSKTSYSRLMTARAIKKEEKPYEHVMAGNLSLDSKENIASALLQAYNQFEARPKVERLLKLKQIKKRRKSFMCPTCKVDFITGPAFHAHLKIHPLECLTCGKCFTRRANLALHMKTHLGIKNYKCDICEKGFITRQKLAEHHNVHTGRTPVKCTLCDDTFRRYSNMVQHRNRHHFKKKAKIRDFVCHCGLVFPSRAKLLWHKETHDEKPKACAYCSDKFVHAALLTRHVRRTHNEHFVGRQSKENVPCPICKQIYLRSKMRAHIQTHSGKRPYNCVICNKGFTTKWNLKLHRWIHLSRSAKPYKCNLCKSAFVRHAEYVAHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKTFHRSYYLSEHMKVHSGVRPYSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00213846;
90% Identity: iTF_00213846;
80% Identity: -