Bsel022842.1
Basic Information
- Insect
- Boloria selene
- Gene Symbol
- ZNF711
- Assembly
- GCA_905231865.2
- Location
- HG993159.1:1675782-1679082[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0057 0.54 11.5 0.7 1 21 78 98 78 99 0.96 2 21 0.3 28 6.0 0.1 3 23 128 148 127 148 0.95 3 21 0.0032 0.3 12.3 0.3 2 23 171 192 170 192 0.97 4 21 0.014 1.3 10.3 0.1 1 23 196 218 196 218 0.95 5 21 1.5 1.4e+02 3.9 0.7 1 15 223 237 223 246 0.78 6 21 0.022 2 9.6 2.3 1 23 252 275 252 275 0.95 7 21 0.00083 0.078 14.1 0.7 1 23 282 305 282 305 0.98 8 21 3.2e-06 0.0003 21.7 2.5 1 23 312 334 312 334 0.98 9 21 2.1e-05 0.002 19.1 4.4 1 23 340 362 340 362 0.97 10 21 3.9e-05 0.0037 18.3 0.2 2 23 366 388 365 388 0.96 11 21 0.00017 0.016 16.2 0.6 1 23 465 488 465 488 0.97 12 21 0.61 57 5.1 0.3 2 23 515 537 514 537 0.95 13 21 0.026 2.4 9.4 2.8 1 23 559 581 559 581 0.98 14 21 7.8e-05 0.0073 17.3 0.5 1 23 585 607 585 607 0.98 15 21 5.8 5.4e+02 2.0 0.3 1 15 612 626 612 635 0.74 16 21 0.0005 0.047 14.8 0.2 1 21 641 661 641 664 0.90 17 21 0.093 8.7 7.7 0.4 2 22 769 789 768 791 0.89 18 21 0.0043 0.4 11.9 0.5 1 23 813 835 813 835 0.99 19 21 0.0067 0.63 11.2 3.2 1 21 839 859 839 861 0.95 20 21 0.16 15 6.9 1.1 1 23 895 918 895 918 0.92 21 21 0.0091 0.85 10.8 0.5 1 23 924 947 924 947 0.97
Sequence Information
- Coding Sequence
- ATGGGCGGTGGAAGAACTGACTCAAGTTTTCTGTTTTTAGGAGAACGCGGTCAGACAGAAAACGACAATATTAAGTCAACTGAAAGTTTAGTGTTAGATAAACCTAAAGTTACGGAGAAACGAGGTTATCAAAGAAGTGCCAGAGCTGAAGCCAGACTTATGACTAAGAAGAATGCCAGTGCTATACTCGAATGTTGGTTTTTATGTCCATTTAGATGGAAAAGGAATAGATTTAAATGCGCTTATTGCGATGATAATTTCACTGAATGCTCAGAGCTTCGGGCTCATGTTAGACTTTGCTCGACCCAACACAGCGTTACAGATATTTACAGTAAATTCAAAGAAATGTCACTTATAAATGTTGATATCACTGAAGCCATATGCAGAATATGCGCCATGCCGTTTCAAGACCTAACAGATATGAAGCGGCACGTTATAAACCATGGTTATGACGTAAACTCATCCTATCCCGATGGTGTTTTACCATTTCGCTTGGACAAAGAGTCCTGGAGGTGTGTTATATGTCAAGAATCGTTTAATAACTTCCTTAAATTGTATGAACACATGAATGTTCATTACCAGCACTACATATGTGCGACTTGCGGTAAAGGGTACATGACAGCGCCTCGGTTACGCAAACATTCTGAAGTCCATATAACGGGTACGTTTCCATGTGATAAGTGTAGGCGAATATTCACTATGCGTGCGGCTAGAGATTACCACAAAGCCCACGCCCACGCAAAAGGACCTCGTTATGAGTGCCCACACTGTAATATGAGATTTGAGGGCTATTACGAAAGAATGCATCATTTGAATGAAGTTCATAGAGAAAAGGAGGTTTCTTATAAATGTACTCAATGTGAATTATCTTTCAAAACTAGTGGAAAGCGGGCAGTCCATGTAAGATCGATACATTTTCCTCAACAGCGCAATTATTCTTGCCCTTTTTGTAAATGGTTCTTTAAAACTAGCTACGAATTGAAAAGGCATATGGTGAAACATACGGGCGAAAGGAATTTTTGTTGTGCGGTTTGTGGAAAGACCTTCCCAAGGCATAGAGCACTTAAGACCCATCTTAAAACACATGAAGATCTCAGTTGTAATTGGTGCGGGGTTATTTTTAAACAAAAAGCCCTACTAATGACACATTTACGTTCAAATCATCCGGAAATAAGTTCCGCTATTGCGGACTCTGAAGATATAGTGGTAGTAAAACGCGTAAGAAAGATAAAGGACAACGTTTGTGCACGACAAATGCGTCGTCGGCGGCGTGCCAACAACGAACTTCCAGAGGAATCTGAGAAGCGAATATCAAAAACTATGATGCGTCGAAATGCTATGACGCTTTTAGAATATTCTACAGCTTGGGCTTTTCGATGGTTCCAAAGCGCTTTCTTTTGCTCTTATTGCGACTCTAAATTCGTTGACCCAGTACTCTTGAAAGACCATGTTCGGACTTTTCATATATTTGAAGCACCTACAAGGCGTATATTTTTAAAACTGACTGAAAATAATATGGTTAAAATAGACGTTTCCGACTTGCGCTGTAGATTGTGTAATTATCAAGGTACAAGCGTGGAATTGATGAAGAAACACATAATATCTGTGCATGAAAAAAATTTTCACTTAAACTACAATGATGGTGTTCTACCATTTATACTTGAACCTAATAGATTTAATTGTCAAATGTGTAGTGCAGTATTCTCCAGTTTTTGTAAAATTAACGAACATATGAATACACATTATAAAAACTATGTTTGCGATGCATGTGGAAAAGCATTTATATCCAAATCAAGATTTAGAACTCATGTACAGTCACATGAAGTTGGTAGTTTTCCTTGTGGAGAGTGTGACGAGGTATTAGAAACTAGGGCTGCTAGAATGTGCCACAGATTAAGGATACATAAAAAAGGGATTCGCTATACATGTCCATACTGTCCTGAAGTATTTACCACTTATTATGCCAGAGCTAAACATTTGGTAGATGAACATGATCAAAAAAAAAGAGATTATGAGTGTACATCTTGCGGCCCAGAAGAGCCGGAAACAACAAAAATCAGGATTGAGTGGAGAAAGAAACGACCATTTTTAGAAAACAAAGCAAATTCTGCACTAATTCTAGACTGCTCCAACGCTATAGTTTTTCGTTGGTCGCGTGGAAAATTTCTTTGTGCTTATTGCCCAGATACGTTTCAAAATGTTAAGGAAATCCGGAAACATTGTGGTATTCATGAAAAACTGACAGTCCTACAGAATTCGAAAGTCCATAACTCTTTTCCTCTTAAAATTGACATCTCAGATCTAAAATGCAAGCTGTGTGATAGCAACTTGAAAAATTTAACGGAACTTAAAAACCATTTAGTTGGGATGCACAATAAAAAATTTGACGCAAATTATGATGATGGTGTTATTCCTTTCGTATTAACTGGTTTAGAGTATAGATGTGTGATTTGCGATGATTTATTTGAAAGCTACGTGAACTTGTTCAGTCACATGAATAAACATTACCAGAGTTTTGTTTGCTACACATGTGGCAAAGGATATTCTGCTAAGTATAAGCTTCGAGCACACCAAAAATGTCATGAATCCGGCAAAGTGCCATGTACAAGATGTGATATGGTATTTTTAAACCACGTCATTAAAAATCGACATGTTGCCACCGTTCATGGCTCAAAAAAACGTTATCGCTGCCCAATTTGTGCCATGGCATTTGAGTCTTGTCATTCTAGATTGATTCACCTTGGTAAAATACATGGACAGAAAAGTGAATATCGGTGTAAAATGTGCCCGGCAATATTTAGTACGGGGACATCGCGCTATTCTCATATGAGGCTTGTACATAAACAAAAGAAGATAGATACCCTAAAGTAA
- Protein Sequence
- MGGGRTDSSFLFLGERGQTENDNIKSTESLVLDKPKVTEKRGYQRSARAEARLMTKKNASAILECWFLCPFRWKRNRFKCAYCDDNFTECSELRAHVRLCSTQHSVTDIYSKFKEMSLINVDITEAICRICAMPFQDLTDMKRHVINHGYDVNSSYPDGVLPFRLDKESWRCVICQESFNNFLKLYEHMNVHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCDKCRRIFTMRAARDYHKAHAHAKGPRYECPHCNMRFEGYYERMHHLNEVHREKEVSYKCTQCELSFKTSGKRAVHVRSIHFPQQRNYSCPFCKWFFKTSYELKRHMVKHTGERNFCCAVCGKTFPRHRALKTHLKTHEDLSCNWCGVIFKQKALLMTHLRSNHPEISSAIADSEDIVVVKRVRKIKDNVCARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLEYSTAWAFRWFQSAFFCSYCDSKFVDPVLLKDHVRTFHIFEAPTRRIFLKLTENNMVKIDVSDLRCRLCNYQGTSVELMKKHIISVHEKNFHLNYNDGVLPFILEPNRFNCQMCSAVFSSFCKINEHMNTHYKNYVCDACGKAFISKSRFRTHVQSHEVGSFPCGECDEVLETRAARMCHRLRIHKKGIRYTCPYCPEVFTTYYARAKHLVDEHDQKKRDYECTSCGPEEPETTKIRIEWRKKRPFLENKANSALILDCSNAIVFRWSRGKFLCAYCPDTFQNVKEIRKHCGIHEKLTVLQNSKVHNSFPLKIDISDLKCKLCDSNLKNLTELKNHLVGMHNKKFDANYDDGVIPFVLTGLEYRCVICDDLFESYVNLFSHMNKHYQSFVCYTCGKGYSAKYKLRAHQKCHESGKVPCTRCDMVFLNHVIKNRHVATVHGSKKRYRCPICAMAFESCHSRLIHLGKIHGQKSEYRCKMCPAIFSTGTSRYSHMRLVHKQKKIDTLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00779671;
- 90% Identity
- -
- 80% Identity
- -