Basic Information

Insect: Boloria selene
Gene Symbol: TFPT
Assembly: GCA_905231865.2
Location: HG993141.1:10415073-10416537[-]

Transcription Factor Domain

TF Family: HMG
Domain: HMG_box domain
PFAM: PF00505
TF Group: Other Alpha-Helix Group
Description: High mobility group (HMG) box domains are involved in binding DNA, and may be involved in protein-protein interactions as well. The structure of the HMG-box domain consists of three helices in an irregular array. HMG-box domains are found in one or more copies in HMG-box proteins, which form a large, diverse family involved in the regulation of DNA-dependent processes such as transcription, replication, and strand repair, all of which require the bending and unwinding of chromatin. Many of these proteins are regulators of gene expression. HMG-box proteins are found in a variety of eukaryotic organisms, and can be broadly divided into two groups, based on sequence-dependent and sequence-independent DNA recognition; the former usually contain one HMG-box motif, while the latter can contain multiple HMG-box motifs. HMG-box domains can be found in single or multiple copies in the following protein classes: HMG1 and HMG2 non-histone components of chromatin; SRY (sex determining region Y protein) involved in differential gonadogenesis; the SOX family of transcription factors [1]; sequence-specific LEF1 (lymphoid enhancer binding factor 1) and TCF-1 (T-cell factor 1) involved in regulation of organogenesis and thymocyte differentiation [2]; structure-specific recognition protein SSRP involved in transcription and replication; MTF1 mitochondrial transcription factor; nucleolar transcription factors UBF 1/2 (upstream binding factor) involved in transcription by RNA polymerase I; Abf2 yeast ARS-binding factor [3]; yeast transcription factors lxr1, Rox1, Nhp6b and Spp41; mating type proteins (MAT) involved in the sexual reproduction of fungi [4]; and the YABBY plant-specific transcription factors.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.1e-19 5.8e-16 59.3 0.7 1 68 138 210 138 211 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.1e-19	5.8e-16	59.3	0.7	1	68	138	210	138	211	0.90

Sequence Information

Coding Sequence: ATGACAGTCCAGCAACTCAACTCGAATATTTCTGACGACTCGGATGATATGGTTAGTTTACCATCGGAGGAAGAGATTTATAGGCGAAAATACCAGTTATTATTGGAGCGATGTGAAGTGTTGCAACAGGATAATGAGCGAATTGTGAATAGAATACACGAAGTAAAGAAAATAACGAAACGTTATAAAAAAGATATAAAGGTACTGGTGGAACGATTAGATAAGCATGGAGATCCCTTCAGAACAGCTGCAGTTGAAGTAGAAGTAAAGCCTGAAGTCACAACTCGACCGCCCCGTGCAGGTGCTAAAACTGGTGCAAAACAAGCAGACAAACAGAATGCTGCAGGGGGCAAAAAACCTGCACCTAAAAGAAAAAGTAAAGCTGATAAGCCGGAAAGAGATCCAAATGCTCCAAAAAAACCATGTAATGCATTTTTTCAATTTTGCCAAGAGCAAAGACCTGTAGTTGTGGCTGAAACTACTTCTGAAATGGGGTCAGAGCCTTCAAAACAAGAAGTTACAAGGCAACTAGCATCAAGATGGAGAGCACTTACAAATGAAGAAAAAAGGGTATATGTTGCAATGTTTGAAAGATCAAAGGAAAAATATGCGGAGGAAATGTCAGCATACATTAAAAAAGAACAATGA
Protein Sequence: MTVQQLNSNISDDSDDMVSLPSEEEIYRRKYQLLLERCEVLQQDNERIVNRIHEVKKITKRYKKDIKVLVERLDKHGDPFRTAAVEVEVKPEVTTRPPRAGAKTGAKQADKQNAAGGKKPAPKRKSKADKPERDPNAPKKPCNAFFQFCQEQRPVVVAETTSEMGSEPSKQEVTRQLASRWRALTNEEKRVYVAMFERSKEKYAEEMSAYIKKEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00212460; iTF_00642314; iTF_00878849; iTF_01203234; iTF_01204035; iTF_01206546; iTF_01204885; iTF_01202460; iTF_01205696; iTF_01312225; iTF_00113318; iTF_00112496; iTF_00187167; iTF_01316351; iTF_01317292; iTF_00114102; iTF_01495041; iTF_01130021; iTF_01176173; iTF_01115695; iTF_01149586; iTF_01337749; iTF_01495772; iTF_00180477; iTF_00249694; iTF_01494304; iTF_01140194; iTF_01402714; iTF_00942818; iTF_01153026; iTF_00325379; iTF_00198117; iTF_01134789; iTF_01135754; iTF_00156241; iTF_00342197; iTF_00462389; iTF_00155296; iTF_00010067; iTF_00009023; iTF_00720292; iTF_01302338; iTF_00640323; iTF_01220653; iTF_00072814; iTF_00011986; iTF_00146424; iTF_00013022; iTF_00651743; iTF_00027750; iTF_00026849; iTF_00784394; iTF_00783483; iTF_01441093; iTF_01439937; iTF_00667490; iTF_00147459; iTF_00177123; iTF_00273603; iTF_00745699; iTF_01061891; iTF_00383653; iTF_01285541; iTF_01526021; iTF_01028294; iTF_01094918; iTF_01119334; iTF_01363110; iTF_00039815; iTF_00425384; iTF_00695592; iTF_01425064; iTF_00374121; iTF_00447145; iTF_00843529; iTF_00907049; iTF_01118313; iTF_01246985; iTF_01338761; iTF_00906154; iTF_00907882; iTF_00932554; iTF_01026186; iTF_01031146; iTF_00171755; iTF_00237579; iTF_00924683; iTF_01093099; iTF_00043500; iTF_00888268; iTF_01084268; iTF_00952717; iTF_01192717; iTF_00111662; iTF_00124270; iTF_01533934; iTF_00622831; iTF_00931407; iTF_00041776; iTF_01534832; iTF_00123377; iTF_01532017; iTF_00040818; iTF_00449106; iTF_01062802; iTF_01063762; iTF_01340114; iTF_00786003; iTF_00809139; iTF_00036724; iTF_00375220; iTF_00038773; iTF_00810069; iTF_01029269; iTF_00018166; iTF_00785206; iTF_01085238; iTF_00037815; iTF_00771927; iTF_00850743; iTF_00017336; iTF_00072152; iTF_00711864; iTF_00973784; iTF_01094040; iTF_01361624; iTF_00300217; iTF_00301177; iTF_00726361; iTF_00758170; iTF_00831226; iTF_00851802; iTF_01030234; iTF_00951835; iTF_01173275; iTF_01230587; iTF_01533051; iTF_00172956; iTF_00364028; iTF_00445180; iTF_01117212; iTF_01362428; iTF_00122397; iTF_00274429; iTF_01527229; iTF_00120510; iTF_01064670; iTF_00302111; iTF_00446144; iTF_00685440; iTF_00928704; iTF_01027328; iTF_01260102; iTF_00042633; iTF_00049903; iTF_01221572; iTF_01487701; iTF_00185310; iTF_00327080; iTF_01179487; iTF_01180308; iTF_00186176; iTF_01377472; iTF_01564650; iTF_00986091; iTF_00985105; iTF_00896803; iTF_01145259; iTF_00947884; iTF_00827950; iTF_00353072; iTF_00205121; iTF_01151205; iTF_00953511; iTF_01080712; iTF_01507210; iTF_01021228; iTF_01079055; iTF_01079888; iTF_00660308; iTF_00801846; iTF_01091928; iTF_01508058; iTF_01506335; iTF_00077480; iTF_00647989; iTF_00833004; iTF_01143824; iTF_01141666; iTF_01148807; iTF_00957948; iTF_00236625; iTF_01490127; iTF_00235856; iTF_01545745; iTF_01245932; iTF_00197362; iTF_00208882; iTF_00411458; iTF_00410280; iTF_00207914; iTF_01072492; iTF_00412505; iTF_01133724; iTF_00409279; iTF_00774482; iTF_00778753; iTF_01156449; iTF_00248073; iTF_01147373; iTF_00247182; iTF_01142384; iTF_01148080; iTF_01158960; iTF_00723058; iTF_01143090; iTF_01144530; iTF_01155188; iTF_01146229; iTF_00159832; iTF_00159833; iTF_00922873; iTF_01157785; iTF_01138941; iTF_01153981; iTF_01367905; iTF_00166915; iTF_00970403; iTF_01033731; iTF_01082436; iTF_00887398; iTF_01359750; iTF_00418983; iTF_00419752; iTF_00971368; iTF_00277357; iTF_00421359; iTF_00842672; iTF_01438928; iTF_01090769; iTF_00461558; iTF_00795702; iTF_00025239; iTF_01034584; iTF_00420538; iTF_01437982; iTF_00958659; iTF_00959396; iTF_00960158; iTF_00779495; iTF_00776716; iTF_00777998; iTF_00780244; iTF_00781015; iTF_00781820; iTF_00736617; iTF_00621227; iTF_00775244; iTF_00782638; iTF_00776014; iTF_01193583; iTF_00674289; iTF_00994349; iTF_00458042; iTF_01181882; iTF_00824739; iTF_01078202; iTF_00204349; iTF_00673502; iTF_01544882; iTF_01542964; iTF_01546647; iTF_01543933; iTF_01569331; iTF_00150548; iTF_00925717; iTF_00786788; iTF_01140917; iTF_01140912; iTF_00710198; iTF_00711012; iTF_00744631; iTF_00934758; iTF_00164363; iTF_00405900; iTF_01217492; iTF_00933751; iTF_00687870; iTF_00403807; iTF_01248128; iTF_01178562; iTF_00771079; iTF_01561116; iTF_00276413; iTF_00358559; iTF_01562002; iTF_00357500; iTF_00114944;
90% Identity: iTF_01181882;
80% Identity: -