Basic Information

Insect: Boloria euphrosyne
Gene Symbol: -
Assembly: GCA_951802675.2
Location: OX637895.1:1389645-1396440[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.15 15 7.1 0.4 3 23 130 150 128 150 0.96

2 15 0.0018 0.17 13.2 2.8 1 23 261 283 261 283 0.99

3 15 0.00022 0.022 16.0 1.3 1 23 289 312 289 312 0.96

4 15 0.031 3.1 9.2 4.7 1 23 317 340 317 340 0.94

5 15 1.7e-05 0.0016 19.6 0.4 2 23 507 528 506 528 0.97

6 15 0.00068 0.067 14.5 2.1 1 23 534 556 534 556 0.98

7 15 0.67 67 5.0 8.1 1 23 624 646 624 646 0.97

8 15 0.26 26 6.3 0.2 1 23 653 675 653 675 0.97

9 15 0.001 0.1 13.9 1.9 1 23 681 703 681 703 0.95

10 15 0.00026 0.025 15.8 1.9 1 23 709 731 709 731 0.96

11 15 0.00074 0.073 14.4 2.9 1 23 740 762 740 762 0.99

12 15 0.00012 0.012 16.8 0.6 2 23 809 830 809 830 0.97

13 15 0.031 3 9.3 5.9 1 23 847 869 847 869 0.95

14 15 2.5e-06 0.00024 22.2 0.7 1 23 875 897 875 897 0.98

15 15 5.2e-07 5.2e-05 24.3 3.1 1 23 903 926 903 926 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.15	15	7.1	0.4	3	23	130	150	128	150	0.96
2	15	0.0018	0.17	13.2	2.8	1	23	261	283	261	283	0.99
3	15	0.00022	0.022	16.0	1.3	1	23	289	312	289	312	0.96
4	15	0.031	3.1	9.2	4.7	1	23	317	340	317	340	0.94
5	15	1.7e-05	0.0016	19.6	0.4	2	23	507	528	506	528	0.97
6	15	0.00068	0.067	14.5	2.1	1	23	534	556	534	556	0.98
7	15	0.67	67	5.0	8.1	1	23	624	646	624	646	0.97
8	15	0.26	26	6.3	0.2	1	23	653	675	653	675	0.97
9	15	0.001	0.1	13.9	1.9	1	23	681	703	681	703	0.95
10	15	0.00026	0.025	15.8	1.9	1	23	709	731	709	731	0.96
11	15	0.00074	0.073	14.4	2.9	1	23	740	762	740	762	0.99
12	15	0.00012	0.012	16.8	0.6	2	23	809	830	809	830	0.97
13	15	0.031	3	9.3	5.9	1	23	847	869	847	869	0.95
14	15	2.5e-06	0.00024	22.2	0.7	1	23	875	897	875	897	0.98
15	15	5.2e-07	5.2e-05	24.3	3.1	1	23	903	926	903	926	0.98

Sequence Information

Coding Sequence: atgaataataatgtgTCTCCCGAGGTCGATCCATTGAGTTCATATAATTTAAGTACATTCCATAACTTTGAAAGTTATGATAATCTGCAATACGGAGACCCTGGTGTGTTTCCGTACCCTGTCAAACTAGAGCAATACCAAAATgcctttaattattataataattcaactGCAAGCACTGTGAAAAGTTCAgatgaaaatacaaaaaataataatccaaCAAACAAAGAGATTGAGTCTaaagttgtaaataatgtaGAAAACAAAACCCAAAAAGTAGAAGATGTCAAACCAGATGTAACAAAAGTGGGAAAGCAGAAGATAAAGAAGGAgagaagtaaatatttttctgaaaaGATAACAGAAAAGGATTTTCCTTTTTATGGTTGTTCGTTATGCAATATCTCATATCAAAGCTTACACGAGTTGGATACACATGTGCTTATTCATAAAGAGAGAGTAACGAGTTATGACTTGAGAATAAAAAATCAGATGAAGAAGAGAAAATTAAAAagggaaatgaaaaaaaataaaaaattaaagaaaagtaTCAAAATTGAAAGTCAAGTCGAAGTTGAAATTAAACCGGAAGATGGATATATAGGTAATGAGAAAGCTTCAGATTTTGTAAGCAATACAGAATCAGATAACCAAAGTTCCAAAGAAAATAACGGCAATATTAAAACTAGTAATCAATTAAAAACAACCACAGATAAAAATAACCAATTAGTAGCAAAAAGTTCAACAGAAAACACAAAAGATGAAGAGTTAcagaaaatttataaatgttttgcGTGTCAAAAGCAGTTCACGCTAAGTTACTATTTGAAACTTCATGTCAGATCTCACacagATGAAAAGCCGTACACTTGCTCTTCATGTGGACAGTCATTCATCACAGCAAGTAAACTGGGCCGTCACAATAAAAGATTTCACTTAGCAATAAGATATCAATGTAGAATATGCTATAGATATTTTTCTAGATTTGAATTCCTGACTCGCCATTTTGATAAAAAGCATCCAGATGACAAACTAGAAGGGGAACCATAtgATTACAATGCAATATTACCATATTTAAAAGAACTAGAAGAACAGATGCAGGAGAAGAATGAAAATGAGAAAGAGAAACCTAAACCAGAAGATGTATGGGCCGAATGTGATGTGGTTCCAAAAGAAAATATAGTCAAACAAGAAGAATGTACCAATAACTTTACAATAGAAATAGAAGAAGTTAAAGTTGATATGGATATAGAAGTTAAACAAGAGGAGGTGGAAGATGATAGAAATGTTGATTTTAGTGGTGATTGTGATGGTGTTGGTGGTGATAATTTTATAAGTGATGATATTGGGGGCGATGATGGTAAGAGTGATGAAGTGAAGGATGATGATGTTAAAGAAGAGGATGATGCAACAAAGGATGAAATAACATCCGACGACGACTATTTCCCATCGAACACGTGGGCTGCCACACCCAAAATCGAACCCCCACCATCGCCCAAAACAAAACAAGATCGCCTAAAATGTCCAATATGCGAGAAGAAAGTAAGCACAGTTTCGTACATGAGGGTCCACATGAGGACGCACACTGGGGAGAAACcgtttaaatgttatatatgtaatgCCGGGTTCATAACGAGCAGTAAAATGCATAGACATGTTCTGACTCACCCCGAGTCTTGGAATGaGGATGGAGTAAAACCGgaaaaagaagaaataaaatcGGAAACGGAGAAAGATGGCgatgacgatgatgatgatgatgataagaaagataaaaaagcaataaaaaaaatgaagaaggCTCTTGCAAAGTTCTCGAAGAAACCAAATGATTTGGAGAAAAAGAAGAAGTTGTATCAAAAGCGGCCTCATTCGTGTGAATTTTGTCACAAACGCTTCTTACATTTAGAAACATTACagGTACACAAAAAGAGTCATGAAGGAGAAGAGAGAGTGTACAAATGCAACTTCTGCCTTCAAGAAGTAGAAGATGAGACGGCATTGAAGTCCCACGAAGTGACACACGAGGGACCAAAGCCCTACCTGTGCACTGTGTGTGGGAAGAGCTATAAGAAAAGGGAGACCATGATATACCACAGAAAAAACCACAAGCCTGAAAAAGAATTTATATGCGACATTTGCACAAAATCCTTCAACGCTCAGTGCAAGTTACAGCGACACATCGTCAGCCATCGAGTGGACAAGTTCATACTGAGATACGAGTGTCCTGTGTGTGCTCACATGTTCAACACTAAATATCATGTGCAAATGCACCTCTCCACACACCAGAAGGAGGGATTAATACAAGAAGAAAATCGCAACGAAATATTAGCAATGGTACTGCAAAACGCtcgtaaaataccaaaaaaaccTGACACCTCATCGTCTCTCACCGACATAGTGCCCGCAGACGAGAGAAGCCGCGTGTGTAACATATGCGGGGAAGTCTTCCAACATTTCTACTACTTGGAAGAACATTTAAAGAGCCATGGATCAAAAATAGCAATAGAAGATAGCGAGAAGATAGAAGAAAAGAaacatatatgtaaaatatgcaATAAAGGTTTCAAATTAcactattatttaaagttacacaGTTTCACACACACCAAGGAGAAGCCGTTCATATGCCAACAGTGTGGCAAGGGCTTTATAACGCGCGGGAAATTAAAACGCCATTTGGAAACTCATACGGGTTTGAAAAAATATCAATGTCATATCTGCTATAAATTCTTTACCAGACCTAGTTATTTAAGGATACATGTGAGAACTATCCATGGGACGCAGGACTATAACTTTAGATTGGATAAAAATTATGGGTTCTCAATTCCCGTGATGCAAGATGGGTGA
Protein Sequence: MNNNVSPEVDPLSSYNLSTFHNFESYDNLQYGDPGVFPYPVKLEQYQNAFNYYNNSTASTVKSSDENTKNNNPTNKEIESKVVNNVENKTQKVEDVKPDVTKVGKQKIKKERSKYFSEKITEKDFPFYGCSLCNISYQSLHELDTHVLIHKERVTSYDLRIKNQMKKRKLKREMKKNKKLKKSIKIESQVEVEIKPEDGYIGNEKASDFVSNTESDNQSSKENNGNIKTSNQLKTTTDKNNQLVAKSSTENTKDEELQKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSSCGQSFITASKLGRHNKRFHLAIRYQCRICYRYFSRFEFLTRHFDKKHPDDKLEGEPYDYNAILPYLKELEEQMQEKNENEKEKPKPEDVWAECDVVPKENIVKQEECTNNFTIEIEEVKVDMDIEVKQEEVEDDRNVDFSGDCDGVGGDNFISDDIGGDDGKSDEVKDDDVKEEDDATKDEITSDDDYFPSNTWAATPKIEPPPSPKTKQDRLKCPICEKKVSTVSYMRVHMRTHTGEKPFKCYICNAGFITSSKMHRHVLTHPESWNEDGVKPEKEEIKSETEKDGDDDDDDDDKKDKKAIKKMKKALAKFSKKPNDLEKKKKLYQKRPHSCEFCHKRFLHLETLQVHKKSHEGEERVYKCNFCLQEVEDETALKSHEVTHEGPKPYLCTVCGKSYKKRETMIYHRKNHKPEKEFICDICTKSFNAQCKLQRHIVSHRVDKFILRYECPVCAHMFNTKYHVQMHLSTHQKEGLIQEENRNEILAMVLQNARKIPKKPDTSSSLTDIVPADERSRVCNICGEVFQHFYYLEEHLKSHGSKIAIEDSEKIEEKKHICKICNKGFKLHYYLKLHSFTHTKEKPFICQQCGKGFITRGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRLDKNYGFSIPVMQDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00248327; iTF_00160059; iTF_00723357; iTF_00213790;
90% Identity: iTF_00723357; iTF_00248327; iTF_00160059; iTF_00213790;
80% Identity: -