Beup024727.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Boloria euphrosyne
Gene Symbol
-
Assembly
GCA_951802675.2
Location
OX637895.1:7346244-7352264[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 35 0.06 5.9 8.4 0.2 1 23 67 90 67 90 0.94
2 35 0.67 66 5.1 0.1 2 23 117 139 116 139 0.94
3 35 0.037 3.7 9.0 0.8 2 23 162 183 161 183 0.97
4 35 0.034 3.4 9.1 0.1 1 23 187 209 187 209 0.97
5 35 0.0099 0.98 10.8 0.2 1 23 214 237 214 237 0.95
6 35 0.0076 0.75 11.2 1.0 2 23 245 267 245 267 0.97
7 35 0.0028 0.28 12.5 0.8 1 23 273 296 273 296 0.97
8 35 0.03 2.9 9.3 3.3 1 23 302 324 302 324 0.95
9 35 1.2e-05 0.0012 20.0 0.9 1 23 330 352 330 352 0.99
10 35 0.86 85 4.7 0.2 3 23 441 462 439 462 0.94
11 35 0.0007 0.069 14.4 1.5 2 23 532 553 531 553 0.97
12 35 0.00076 0.075 14.3 0.0 1 23 557 579 557 579 0.98
13 35 0.0021 0.2 13.0 0.3 1 23 584 607 584 607 0.96
14 35 3 3e+02 3.0 0.6 2 23 615 637 615 637 0.93
15 35 1.2e-05 0.0011 20.0 3.2 2 23 645 667 644 667 0.96
16 35 1.8e-05 0.0018 19.4 0.8 1 23 673 695 673 695 0.98
17 35 8.4e-07 8.3e-05 23.6 1.4 1 23 701 723 701 723 0.99
18 35 0.0048 0.48 11.8 0.7 1 23 827 850 827 850 0.90
19 35 0.006 0.6 11.5 0.1 2 23 877 899 876 899 0.97
20 35 1.3 1.3e+02 4.2 2.3 2 23 922 943 921 943 0.96
21 35 0.42 42 5.7 2.0 5 23 950 968 944 968 0.92
22 35 0.01 0.99 10.8 0.7 1 23 973 996 973 996 0.95
23 35 0.22 22 6.6 0.4 2 23 1004 1026 1004 1026 0.94
24 35 0.00024 0.023 15.9 6.1 2 23 1034 1055 1034 1056 0.95
25 35 0.018 1.8 10.0 1.5 1 23 1062 1084 1062 1084 0.97
26 35 8.1e-05 0.008 17.4 4.7 1 23 1090 1112 1090 1112 0.99
27 35 4.1e-05 0.004 18.3 5.1 1 23 1118 1141 1118 1141 0.98
28 35 0.069 6.8 8.2 1.8 1 23 1197 1220 1197 1220 0.93
29 35 0.059 5.9 8.4 0.1 2 23 1247 1269 1246 1269 0.95
30 35 1.8 1.7e+02 3.7 0.3 1 19 1317 1335 1317 1339 0.86
31 35 0.44 43 5.6 2.5 1 19 1344 1362 1344 1364 0.87
32 35 0.0085 0.85 11.0 3.0 2 23 1405 1427 1404 1427 0.95
33 35 0.0029 0.29 12.5 5.5 1 23 1433 1455 1433 1455 0.97
34 35 3.4e-05 0.0034 18.6 2.7 1 23 1461 1483 1461 1483 0.98
35 35 0.00026 0.026 15.8 4.4 1 23 1489 1512 1489 1512 0.97

Sequence Information

Coding Sequence
ATGCATAATcctaGTATCCGTCCTGAAAGTAAAGCAAATGTCACAGGTGTGGTACTCAAGCTCGTGCGAAAAGTTACCCCAAAAACTAATACAGATAATGCTCCCAAAACGAACGAACTTTCTAGACATTTGATAAATGCTAGAGAAATCTTCACTTGGTCTAATGCTACGCCAATTCGAAAGCAAATAGATGTGGGCTATGTTTGTTGCTTTTGTGACGCCGTATACCCTGAACCAGCGCTGTTGAAACAACACACCTTGGAGAGCCACGACGGCATTAATGACAGTAGCTTTACTAAACGAAGGGATCTAAACGCGTTTCACATAAAAGTCGATATTACAGGTTTAAATTGCAAAATTTGCAAGCAAGATTTAGATGATATTGACAAACTAATAATTCATCTAAAGGAAGACCACAATAAAAGACTTTTCCCAGAAATTAAAAACCACATGATACCATTTAAGTTTGATACGCCTTCCTTACAATGTTTTATTTGTTCGAGTGAATTTAACAAATTCAAAAGCCTGTTGGAACATATGAATATTCATTGTAGGAATTATATTTGCACTGTATGTGAAGCTGGCTTTATTAACAGAAAGCGACTTATGGTACATTCAGAGACACATAGAACGGGTGTTTTCCAATGTGGTATATGCCCTGAAGAGTTTACAACGTTGGCAAAAAGGAAATCGCATGTTATTTCCAACCATAAGCCAATCAAAAATAGAAATAGATGTGGCTATTGCAATGAAACTTTCAAAGAATATAATCAAAAGCAAAGACACTTAATAACCGTCCATAACATAAAGAACCAGTATAACTGCAACGCTTGTGAGCGAAGTTTTCCCACAAGAAAAGCTTACAGAGTTCATACGCAACGAGACCATCTGATGGAGAGAAGATTCAAATGCACTGAATGCGATAAAACTTTTTATGGCGGAGATACTTTAAAATGCCACTTGTTGAAGCATTCAGGACTAAGAGAGTTTCAATGTGATATATGTCTGAAGACTTACGGACGAAAGTCGACATTGCGCGATCATTTGAGAATACACGCTGACGATAGGCGGTTCAAGTGTGAGCACTGCGgTTCTCGAAAACAAATACTCGTCGTATCTGGAGGAAACGCGCAGAAAATGCTTCAAAAGCtacaaaaaactaataataatacatttaagaaGAAGCAAGGAAAGACTAAAACAAGTATAGACGATGATAAACGTATTCAAGAAGTAGAAAAACACAGAAATAATTTGCTTGAAATTTTGCTCCATTCCAACGCTACACCAATTCGTTTTAAAGGAGATGTAGGGTACGGTTGCTCTTTTTGTTCCGATCAATTCCCAAAACCTGCTGACTTAAAGAGCCATACAATAAAAGCTCATGACGAAGATAACATTAAAAAAGTCATTGCAGATATGCGAATTTATACTGTGAAGCTAGACATAACAGCTTTACAATGCGCGCTTTGTATAACAGATATACGAACCATAGAAGAGCTTATAGACCATCTAATCAAAGACCATCAACgtattatatatacagatataaaaaatcatatggTGCCATTTAGGTTTGACGATGATCTACTGAAATGTGCTATTTGTTCTGagagatttttcaaatttagaaaTTTGACAGAACATATGAACACACATTACAGAAATTATGTGTGTGATGTATGCGGCGCCGGGTTTGTGAATCGAGATATTCTCAGAAGCCATTTAAGGATTCATAAGATAGGTGATTTTGCTTGCGATTTATGCCCAAAAACATTCAACACTCTTGTTAAGAAACAGTCCCATATTAAAATTGTCCACAAACGATTGTACATGACAAGAAGGTGTGGGTACTGTAACGAACTGTTCGATGATTACAATAAGAAGAACGAACATTTAGCTAAATATCATGATGTCAATCGCGTTATCCTTAAATGCGAACTGTGTGACAAGACGTTCGTCAATCAAAATCATTATAGGCGGCATGTTAGAAAAGATCATCTGATGGAGAGGAATTACGAATGTGAAGTGTGCGATATGAAGTTTTTTAGCAGTGAGAATTTACGAAAACATGTGCTAAAACATACTGGAGAAAGAGACTTTCAATGTAATGTATGTGCGAAATCATTTGCACGCAAATTTACTTTACAACAGCATATGCGAGTGCACTCCAAGGAACTTAGGAAAAGTTGTAGAACATCCCCAGATCGATATTTGGTCATAAGTGAATCAGATGACGTCGGTGGACCGTCAGAAAGTAAAAATTTCGAAGACATAGACGATGATAATAAAAAGACtagagaaagaaaaataaaatctgaaTCTGAATCTGTATGTAGAAAGAAAgccaaaataactataaaaactaaaaagataaAGCTTAAACCTATAAAGGAATTAACAAAACATCATCACAATATAAAAGAGATTCTCCAATGTTCTAACACGACACCGATCCATGGTAAAAATGACCTCGGCTACCTGTGCTGCTATTGCTCAGAACAATTTCCAGATCCTgcagatttaaaaaaacatacgaTTGATATGCACAGAAATGCACCAAAGCCTACTTTCTTGAAAAAGAGAGATTTGCAAAAATTTTACGTCAAAGTCGACATAACTGGATTGCAATGTAATATATGCGGAACAAATATCGATGATTTGGACAAGTTGATCGATCATTTAAAAACTGAGCACGACAGGAAAATTTATACGGACATAAAGAACTGTATGGTACCGTTCAAATTTGATAGTAAAGaactaaaatgttttgtttgtgCAAACGTGTACTCTAAGTTCAAAATGTTGTTAGAGCATATGCATAAGCATTGTAGAAACTTTATATGTGATTGTGGTGCCGGATTTTTCAATCGAAGATCTTATTTGAACCATCAAAAATCTCACATTGTCGGTGAATTTAAATGTGATCAGTGTGATAAAGTTTATGATAATGTTCAAAAGAAGAATCAGCACTTGCGAGCTGTTCATATACATGCACAAAAACTGAACAGATGTGGATACTGCAATGAAAAATTTGCTAGTTATCGAACGAAAGGAGAACATCTTAGAATTGTTCATGGTGTAGGGTGTGAAACAGCTCAATGCCAAGCGTGCGAAAAGAGTTTTTGTAACAAAGATTCCTTAAGGAAACATATAAAGAGCCATCATTTAATGGAAAACCGACACAGTTGCACTCTGTGCGAAATGACATTTTTTGCTAAAAAAAGTTTAGTAGAGCACATGGTCACACATACCAAAACTCGTAGTTTTCAATGTAAAGTGTGTTTTAAGAGATATGGACGAAAGCACACGTTGCGTGAACACATGCGTATTCATAATAATGATAGGCGTTTCAAATGTGAACATTGTGGGATGGCGTTTGTACAGAAGTGTAGTTGGCGACGTCATATGCAAACTAAACATGATGAACCAAGTTTGCGAAGATGTCAGATTGACATGAAGGAAGATTCTAAACAGGAAGAACCATCATTAAAAAGAGGTGAAGCATTGGGAAAACATCGGATCAACATGAGAGAGATTTTATTGAACTCTAACGCAACGCCGATTCGGTGTCAGGGTGTTTTCGGCTACAATTGTTGCTTTTGTACTCAACAATTCCCAGAGCCTGCAGATTTAAAAAAGCATACCATAGAAAAGCACGAtgagaaaacaaaaattaattttatgaaagGCAAAGACTTATTCAAATTTTACGCCAAGCTAGATATAACTGATCTTAAATGCAATATATGCAACTCAAGTATTAATACAGTCGAGGAGTTAGTGCGGCATCTTAAAGAGGAACATAAGAAGGTTGTGTTCACAGACATCAAGAATCAAGTGCTACCATTTAAATTTGACAATGAAAGGCTTACATGTTTCATTTGCATGAACGTGTACCATAAATTTAAATCTCTATTAGAACATATGAATATTCATTGCAGAAATTACATTTGTGAAGTGTGTGATGCCGGTTTCGTTAACCGCGCAATTCTTGCTCAACACTCTAAATGTCATAAACTTGGCTCTTTCAGCTGTGATCATTGTCCAAAAATTTTTGACACATTCAGAAAAAAACGGTCTCATGAAAAGTGTGTGCACACACATTCGACAACTTTGAATAAATGCGGCTACTGCTGCGAAAAGTTTCGTGATTATAGACAGAAGGAACGGCACGTAGTTGAAGTGCACGGAATAGTCGCTAAGGCATTAAAATGTTTCGTTTGTGACAAAACATTTTCAAACCAAAAGGATCACACTATACATGTTAAAAGATTACATTTGATGGATAGAAGACATAAATGTCCGCATTGTGAAATGAGTTTTTTCTCttcttttgaattaaaaaatcatcGTGTTAAGCATACAGGTCTTAAGGCCTTTGAATGCGAGATATGCCACAAGAAGTATGGTCGTAAGAAAACGTTAACGGAACACCTGCGTATACATGCAGATGATAGGCGGTTCAAGTGTGAGCACTGTGGTCAGACGTTCGTACAGAAGTGCAGCTGGCGAGGGCATATGCGTGCGAAGCATGGAGAAATAGTGTAG
Protein Sequence
MHNPSIRPESKANVTGVVLKLVRKVTPKTNTDNAPKTNELSRHLINAREIFTWSNATPIRKQIDVGYVCCFCDAVYPEPALLKQHTLESHDGINDSSFTKRRDLNAFHIKVDITGLNCKICKQDLDDIDKLIIHLKEDHNKRLFPEIKNHMIPFKFDTPSLQCFICSSEFNKFKSLLEHMNIHCRNYICTVCEAGFINRKRLMVHSETHRTGVFQCGICPEEFTTLAKRKSHVISNHKPIKNRNRCGYCNETFKEYNQKQRHLITVHNIKNQYNCNACERSFPTRKAYRVHTQRDHLMERRFKCTECDKTFYGGDTLKCHLLKHSGLREFQCDICLKTYGRKSTLRDHLRIHADDRRFKCEHCGSRKQILVVSGGNAQKMLQKLQKTNNNTFKKKQGKTKTSIDDDKRIQEVEKHRNNLLEILLHSNATPIRFKGDVGYGCSFCSDQFPKPADLKSHTIKAHDEDNIKKVIADMRIYTVKLDITALQCALCITDIRTIEELIDHLIKDHQRIIYTDIKNHMVPFRFDDDLLKCAICSERFFKFRNLTEHMNTHYRNYVCDVCGAGFVNRDILRSHLRIHKIGDFACDLCPKTFNTLVKKQSHIKIVHKRLYMTRRCGYCNELFDDYNKKNEHLAKYHDVNRVILKCELCDKTFVNQNHYRRHVRKDHLMERNYECEVCDMKFFSSENLRKHVLKHTGERDFQCNVCAKSFARKFTLQQHMRVHSKELRKSCRTSPDRYLVISESDDVGGPSESKNFEDIDDDNKKTRERKIKSESESVCRKKAKITIKTKKIKLKPIKELTKHHHNIKEILQCSNTTPIHGKNDLGYLCCYCSEQFPDPADLKKHTIDMHRNAPKPTFLKKRDLQKFYVKVDITGLQCNICGTNIDDLDKLIDHLKTEHDRKIYTDIKNCMVPFKFDSKELKCFVCANVYSKFKMLLEHMHKHCRNFICDCGAGFFNRRSYLNHQKSHIVGEFKCDQCDKVYDNVQKKNQHLRAVHIHAQKLNRCGYCNEKFASYRTKGEHLRIVHGVGCETAQCQACEKSFCNKDSLRKHIKSHHLMENRHSCTLCEMTFFAKKSLVEHMVTHTKTRSFQCKVCFKRYGRKHTLREHMRIHNNDRRFKCEHCGMAFVQKCSWRRHMQTKHDEPSLRRCQIDMKEDSKQEEPSLKRGEALGKHRINMREILLNSNATPIRCQGVFGYNCCFCTQQFPEPADLKKHTIEKHDEKTKINFMKGKDLFKFYAKLDITDLKCNICNSSINTVEELVRHLKEEHKKVVFTDIKNQVLPFKFDNERLTCFICMNVYHKFKSLLEHMNIHCRNYICEVCDAGFVNRAILAQHSKCHKLGSFSCDHCPKIFDTFRKKRSHEKCVHTHSTTLNKCGYCCEKFRDYRQKERHVVEVHGIVAKALKCFVCDKTFSNQKDHTIHVKRLHLMDRRHKCPHCEMSFFSSFELKNHRVKHTGLKAFECEICHKKYGRKKTLTEHLRIHADDRRFKCEHCGQTFVQKCSWRGHMRAKHGEIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00213772;
90% Identity
-
80% Identity
-