Beup011356.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- -
- Assembly
- GCA_951802675.2
- Location
- OX637880.1:9461910-9473400[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.08 35 5.3 3.7 5 34 3 28 2 43 0.81 2 15 0.015 6.7 7.6 6.5 18 38 43 64 36 66 0.90 3 15 0.036 16 6.4 0.3 16 32 69 86 65 92 0.76 4 15 0.043 19 6.2 2.7 6 33 84 115 82 121 0.71 5 15 0.061 26 5.7 4.2 5 38 115 148 111 149 0.78 6 15 0.0035 1.5 9.7 1.3 5 38 143 176 140 183 0.85 7 15 0.23 98 3.9 5.8 13 38 178 204 171 210 0.80 8 15 0.044 19 6.2 3.9 18 38 211 232 203 233 0.88 9 15 0.13 58 4.6 2.9 6 39 228 257 227 261 0.73 10 15 0.0059 2.6 9.0 5.9 13 38 262 288 253 289 0.80 11 15 0.015 6.6 7.7 3.5 6 33 284 311 281 317 0.77 12 15 0.028 12 6.8 2.6 10 33 316 339 311 345 0.74 13 15 0.00065 0.28 12.0 4.9 6 38 340 372 338 373 0.86 14 15 0.024 10 7.0 0.7 19 38 380 400 374 401 0.89 15 15 0.72 3.1e+02 2.3 2.9 12 30 435 454 424 465 0.75
Sequence Information
- Coding Sequence
- ATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATATGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCATACAGGTGAAACGCCGCACCATTGTCACATTTGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGGTCACATACAAATGACACACCGTTCAGATGCGATCTTTGCGGGAAGTCCTTCACGAGGAAGGAACACTTCACCAATCACATATTGTGGCACACTGGCGAAACCCCACACCGTTGCGATTTTTGTTCCaaaacgtttacacgcaaagAGCACCTACTAAACCACGTGCGACAGCACACCGGCGAGTCTCCCCACCGCTGCAACTTCTGCTCGAAGTCCTTCACGAGACGCGAACACCTCGTCAACCACGTGCGTCAGCACACTGGCGAGACCCCCTTCCAATGTGGCTACTGTCCTAAAGCATTCACTAGAAAAGATCATTTAGTAAACCACGTCCGTCAGCACACTGGAGAGTCGCCGCATAAATGCACTTTCTGTACGAAGTCCTTCACGCGTAAAGAACATTTAACAAACCACGTGCGGCAACACACCGGGGAGTCCCCGCATCGATGCACATACTGCGCTAAATCCTTCACGAGAAAGGAACATCTCACAAATCACGTTAGACAGCATACAGGCGAGACTCCCCACAAGTGCACGTATTGCCCGCGCGCGTTCTCCCGCAAGGAGCACCTGAACCAGCACATTCGCCAGCACACGGGCGATACTCCGCACACCTGCACCTACTGCAATAAGACCTACACCAGGAAGGAGCACCTGGTGACGCATGTTCGACAACATACTGGGGAGACGCCGTTCAAATGCACCTACTGTTCGAAGTCGTTCTCACGCAAGGAACACCTAACTAACCATGTGCACATGCACACTGGTGAAACCCCACACAAGTGTCCCTTCTGCACCAAGACATTCTCAAGAAAGGAACACTTAACTAATCACGTCAGAATACATACGGGTGAATCGCCACATAGATGCGATTTCTGCAACAAAACGTTCACAAGAAAGGAACATCTCACCAACCACTTGAAGCAGCACACGGGCGACACTCCGCACGCCTGCAAAGTTTGTTCAAAGCCTTTCACAAGGAAAGAACATCTTATTACACATTTGAGATCCCACACTTGTGGCGAGCGGCCATACGTTTGCGGGGAATGTGGTAAATCGTTCCCGCTAAAAGGAAATCTACTGTTTCATGAAAGATCCCACAATAAAGGCGCAAATGCAACCAACAAGTCGTTCCGTTGCGAGATTTGTTCAAAAGAATTTATGTGTAAAAGTCATTTATCATCACATCGGAGAACTCATACAGAAACAGGTGAAAATACAACAAATACAGAGCCGGCTGCTGAAAGTGAAGACTGTGGAGATTGTACTAAATGTGAGAATGAGTCACCTGAAATACCTGAAAGAAAACACGATATAAGagcatCGTCTGAAAGCAGGACCACAGAAGCTCCTGAACAAAGTCCGACATCAAACGAAACAGTAATGCAAATTACCAGCCAGCAGGTACGAACAGGCACAGTAACAAGTGCAGCAAGTGTGTCAACTGGCACATTCACACACACAGCGAGTACCCAACACCACGCGACGACGAGTATATCCCATCATCCTGTCACAGTGAACTACTAG
- Protein Sequence
- MVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCHICGKKYTRKEHLVNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNQHIRQHTGDTPHTCTYCNKTYTRKEHLVTHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHMHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCNKTFTRKEHLTNHLKQHTGDTPHACKVCSKPFTRKEHLITHLRSHTCGERPYVCGECGKSFPLKGNLLFHERSHNKGANATNKSFRCEICSKEFMCKSHLSSHRRTHTETGENTTNTEPAAESEDCGDCTKCENESPEIPERKHDIRASSESRTTEAPEQSPTSNETVMQITSQQVRTGTVTSAASVSTGTFTHTASTQHHATTSISHHPVTVNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212785;
- 90% Identity
- iTF_00212785;
- 80% Identity
- iTF_00212785;