Beup025138.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- -
- Assembly
- GCA_951802675.2
- Location
- OX637895.1:9153571-9154624[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-07 0.00026 21.5 0.0 14 39 31 56 18 62 0.79 2 2 5.4 2.6e+03 -1.0 0.0 14 23 113 121 111 123 0.84
Sequence Information
- Coding Sequence
- atGCCGCgaaaatataaaaggaaaataGGGGCACCCGTTCGTGCTGCTTGGTCTGAAGAAGCCCTTTGCAAAGCTTTTGGGGAAATGGATAAAGGCCAAGTCGGTGTAAATGAAATATCTCGTCGTTATGGTATTCCATCTCGAACTTTGAGGAGGCGATATGCTAAAAAAAACTGTGAAAAACTAACTTTGGGAAAACATCCTACATTTGACAACGAGAAACGTCTCGTAGCGCACATACAAAAAGCAGGATTTCCCACAACACGACAGGATGTAAGAAGACCCGCTTTTGAATTTGCCGAGAAACTGggtttggaaaattcttttaacgGTGAAAATGGTTTGTCTATTGCAAGGGCTCAAGGATTAAATCGAGATGAAGTAAACAAAATGTTTGAATTGTTGCTAAAAGTACTAACTGAAAATGATTTGATCGATAAACCTGATCGAATTTATAATACTGACGAAACTGGAGTTCAAATGAACAATAATCCTGGTAAAGTTATTGCTACTAAAGGTGCCAAAGTAGTAAATTCCATCACTTCTAGTGAGAAAGGTGAGATAATGTCAATTATAGCTTGCTGTAACGCTGGTGGCAACTATGTTCCTCCGGTGGTCATTATCAAGGGGGTCAATAAAAGACCAGAGTTTCAAGACGGTCTTCCGCTCGGAGCCAACGTGTACATTAACAAAAAATCTGCCTACGTCAACTCAGAACTCTTTCAAAACTGGCTGAAAGAACAGTTCGTGCCAATAAAACCACAGGGTAAGGTTTTGCTTATACTTGACGGGCATTCATCTCACACTACTGCTATTGATTTACTAGAATTAGCACAAGAAAATGACATCATATTGTTCTGTTTGCCAAGCCACACTACACAGGCTTTACAACCGCTTGACCGGAGTTTTTTTAAACCTTTCTAA
- Protein Sequence
- MPRKYKRKIGAPVRAAWSEEALCKAFGEMDKGQVGVNEISRRYGIPSRTLRRRYAKKNCEKLTLGKHPTFDNEKRLVAHIQKAGFPTTRQDVRRPAFEFAEKLGLENSFNGENGLSIARAQGLNRDEVNKMFELLLKVLTENDLIDKPDRIYNTDETGVQMNNNPGKVIATKGAKVVNSITSSEKGEIMSIIACCNAGGNYVPPVVIIKGVNKRPEFQDGLPLGANVYINKKSAYVNSELFQNWLKEQFVPIKPQGKVLLILDGHSSHTTAIDLLELAQENDIILFCLPSHTTQALQPLDRSFFKPF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00874400;
- 90% Identity
- -
- 80% Identity
- -