Beup015485.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- -
- Assembly
- GCA_951802675.2
- Location
- OX637885.1:4953843-4954358[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-08 3.5e-05 24.2 0.0 17 41 1 25 1 28 0.92 2 2 3.4 1.6e+03 -0.3 0.0 27 43 86 103 86 104 0.88
Sequence Information
- Coding Sequence
- atGGGTATTAGGGAAGCCTGTCGGATATATGGCGTACCAAAAACAACAGTACATGATCGTATTTCAGGCAAAGTTGCCAATAATAAGAAACCAAAAGTTGGCCCCGACCCTATTTTAGGTCGTGAGGgagaagaaaaattaaaaacttgggTACTAGACATGGCTAAATGTGgctttccaataaataaaaaagagttACTCGAAAGCGTTGCTAATATAGTACGAGATACGAATATTAAAAATCCATTCAAGGATGGTGTTCCTGGAGACACATGGTATCAAGCTTTTTTAAGACGTCATCCCGATGTAAATGTTAGGGAGCCGGAGGGAATAAATAATGCACGAGCAGCAGTAACGGAGAATCGCGTCAGGTTGTGGTTTAAGGACCTAAAAGAATATATGAAATCCATTGACGCGCTAGATGTATTTGATGATCCTACAAGGATATTTAATGGAGACGAGACGGGGTTTTCACTTTGCCCAAAAAGTGGGAAAGTTTTAGGACCAAGAGgttaa
- Protein Sequence
- MGIREACRIYGVPKTTVHDRISGKVANNKKPKVGPDPILGREGEEKLKTWVLDMAKCGFPINKKELLESVANIVRDTNIKNPFKDGVPGDTWYQAFLRRHPDVNVREPEGINNARAAVTENRVRLWFKDLKEYMKSIDALDVFDDPTRIFNGDETGFSLCPKSGKVLGPRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01316279;
- 90% Identity
- iTF_01316279;
- 80% Identity
- -