Beup012566.2
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- -
- Assembly
- GCA_951802675.2
- Location
- OX637882.1:837387-845155[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-11 1.5e-08 35.0 0.0 4 39 166 202 163 206 0.89 2 3 3.7e-11 1.8e-08 34.8 0.2 2 39 218 255 217 258 0.92 3 3 2.3e-08 1.1e-05 25.8 0.4 2 30 273 301 272 311 0.91
Sequence Information
- Coding Sequence
- ATGACCGGGACAGAAACATTTCTAGTGAAATGCGAACCGCTATCCGATGACGAAGAAACAAGTTCGCACTTTGCAAAAAGCTATTTTCATAcgCTTGCGTCAGAATATCCCATCAAATTCGAACGAATATCGGAAGATGAAAATGTGTCGTCGAATCTTCTACACCACTTGCAGCATGGATTGGAAGAGCTGGCACCCGCGCCGGCCGGCCCCGCCGCCACGCCGGTGCGCGAGCAGCTGCCGGCGCCCTACGAGGCCTCGCTCGCTACGCTCGAGCCTGCGCTCGACCATGATGTGgGAACATCGCTCATTAGTAGACACATGGAAATGATGAATGAAGTTGCGGACTCTTCCGAGTTCGTGCCATTGATGATCAAAGACGAGCCCAATTCTGAAGGAGAGCAACATCACTTAAGCGGTGACGACACGAGTGACTCCAACGGACCATCGCAAGAAACGTTCAGTCGATCAAGTCCCAAAAGCTGGACCCAACAAGATATGGAAAAAGCTTTGGAGGCTCTGAGGAAACACAACATGAGCCTCACTAAgGCATCAGCAACTTATGGCATTCCGTCCACAACGCTCTGGCAGCGCGCGCACAGACTCGGCATCGACACCCCGAAGAAGGAAGGCGCGTCGAAGTCCTGGAGCGAGGCCGACCTGAAGGGCGCCCTGCACGCGCTCCGTGCCGGGGCCATATCTGCCAATAAAGCTAGCAAGGCTTATGGCATCCCCAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGCCTCGCCGCGCCCTTCAACGCGGCGCCGACCGCGTGGCGCCGCGCCGACCTCGAGCGCGCGCTCGCCGCCATCCGCGCCGGCGCCGCCTCCGTGCAGCGCGCCGCGCACCAGTTCGGCATCCCCACCGGTGCGGTGCGGTGCGCGCGCGCACAGACTATacgtttttga
- Protein Sequence
- MTGTETFLVKCEPLSDDEETSSHFAKSYFHTLASEYPIKFERISEDENVSSNLLHHLQHGLEELAPAPAGPAATPVREQLPAPYEASLATLEPALDHDVGTSLISRHMEMMNEVADSSEFVPLMIKDEPNSEGEQHHLSGDDTSDSNGPSQETFSRSSPKSWTQQDMEKALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALAAIRAGAASVQRAAHQFGIPTGAVRCARAQTIRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00779435;
- 90% Identity
- -
- 80% Identity
- -