Beup024709.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- -
- Assembly
- GCA_951802675.2
- Location
- OX637895.1:7255196-7269341[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8e-12 3.9e-09 36.9 0.0 1 36 184 220 184 223 0.93 2 4 5.3e-07 0.00026 21.5 0.0 1 35 671 705 671 713 0.92 3 4 7.8e-06 0.0038 17.7 0.0 2 30 795 823 794 833 0.89 4 4 2.2e-05 0.011 16.3 0.0 6 38 859 891 854 894 0.83
Sequence Information
- Coding Sequence
- atgaatgtcgaaaataatattttgtattctgAATATGTGTGTAGATGCAAGTGTTGTTTAAATGATAACAACTTGAAAAGCTTGTGGGAACTGAATGTGAGTGATAATGGCGAAGGGGAAATATATGGACAAATGGTGGTGGAATGTTTCGCATTACCGtgGTATCCGTCGGATGAACCGGAGCACATTTGTGAATTTTGTGTCCTAAAACTTCAAGAAGCTTTCAATTTCAAGAAGAACATCTTGGCAGTAGAACATGCTTTATTGAATGGTGATGTCAAAATCAAAGAAGAACTAGAAGCCCAAATAGATACAGAAGAGAACAAGGTGTTAGTTGTGAAGTATGTACCGGTTGAAGATGAGTACCAGCATGTGGAGTATCTGGAAGATGAAGAGGGAGAAgaagataaagaACAGGTGTCAATAATAACGGAATTAGAACAAACAAGTTCAGGCCCTTCAACTCCGGGGGCCTCAAATGCGATTCCCCAAAGGAAATGGccaaagaagaaaaagaaacacGAACTAACAAAACTATACAAACAATACACTCAAGACAATTTAAAGGAAGCTGTAAAAGCAGTACGAAATGGGGAATTAACATGTAACAATGCAGCAATAAAATATGGCATCCCGAAGAAAACTTTGACTGTCAAAGTGAATACTTATGTAGACCGTGAACGTGTGGGTCAAACTGAAGATACCAACGACAAACATTACAAATTGATTGAAGAAATAAAACTTCTCCTCACTCACACCACAGCCGTGCCTTTTAAAACCAAAACGACTAGATACTACTGTTTTTACTGTTCCACGGACGGACAACATTACGAAGATCCAGACGAACTGAGAGAGCATACGAGGACTAAGCATGTGCATGAGTGGACGAAAATAGACATGTACATGAGACCGCAATGGTTGAACGAAGTAATAAAATTGGATGTAGAAGATTTACACTGCAAAATTTGCCTAACAATGGTGCCAGATTGGAACAATTTGTTTGTCCATCTGGGAGTAAACCACGACCTTGAGTTTGATATGGCGTATACCAGAATCATACCATATGCTTTGAGTTCTGACCTCAAATGTTTCCTTTGCAAGCAGAACTTCCACAATTTCGGTCATCTCGACAGCCACATGAACAACCATTATAGCAACTACATATGCTATGAGTGCGGAGATACATTTTTGTCAGCAAGTCGCTTGGATAAGCATTTGAACGTGCATAAAACGGGTAATTTTCCATGCGATTACTGTGAAAAAGTGTTCAAATTAGAGAAGTATAGAGCGAAACATGTCAGTTTAGTGCATATACAAGAAAGTACAGTGAAATGCTTGTATTGTCCCGAaaagtttgtaggcattttccAAAGGCATGTCCATGTGACGGAACACCATAAAGAAAAGATTAAATATATGACATGTGAATACTGTGGCAAAAGTTACACTTGGAAGCCATATTTTCTAGCGCATATGAGAAGAAAGCATGGTGCTGAGAAAAAGTATAAGTGTAAACATTGTGACAAgtgttttttaatgaaatatgaattaaaaaatcatatggTGAGGCATACCGGGGAAAAGAATTTTATCTGTGGTCAATGTGGGTTAGGGTTCGCGAGGATGGTTGGTTTAAAAAAGCATTGTCAGAATGATCATCAAGATGGTGCCACTGGAGAAGATGAATTAAAAGATTTGTGGAGTGAATATTATAATGATGGCGAACTTGAGATATATGGTGAAATGTTGAGTGATTGCTTTGCATTAAATTGGGAACAGCCAACTATAAACTCTGATTCAGATATAGAACATATTTGTAGCACATGTGTATCTAAATTGCATGACGCTGTGAGttttaaaaaggaaatattattatctgCACAATTGTTACtggaagaaattaaaaatgattcatATGAAGAAAATATGGAGGATGATTCTGATACATACATAGAAACAGAGTATCTGAACATCGAGTATTTAGAGGATGAAGATATTGGAAAAGAAAAGTCAGaAGAGGACTTCAAGAAATGTCTTGAGGCCGTTAAAAGTAAAACTCTGTCGCAACACAAGGCATCTTTGTTGTATAATGTACCGAGATGGACAATCCGAAATGCACTCGataAGGTAAAAGTGGAGAAGGATGTGGAGGAGATGCAGAGCAATACCTTGTCGCAGTACAAGGCAACCTCATACAGTGTGCCGAAGAAGGCAAAGCATAAGGAGACTGTCTCAAGTGACTCAAaaGTGCCagaaactaaaaagaaaaaagaaataaaacagaaaaatgaaaaaaatatgaaaagtgATGATAATTTGGTGGATTCAGTAAAATCGAACGAATCAATCAATGTTTCaaagaaaaaagttaaagaGTACTCAGAGACGAACTTAAAGAAGTGTGTAGAAGCTGTTCAGACAAATAGATTGTCGCAAAGCAAGGCGTCCATCATGTACAATGTGCCACAGCTAGCCATACATGACGCGTTAGAggAAAGCAAATTGTCTTCATCAAGCGTACCGGTGGAGTTGATAAAACCAAACCAATCCAAGCCTTACACGGAGGAGGATTACAAGAAGTGTTTGGAAGCAGTTAAGAATAGAACCATGTCCCGTGTTCAGGCCTGCAAGACTTATAATGTACCGATGAGCTCCCTCTATGCCgctataaaaaAATATTTCAACGACGCAGATAAAAAAACAGACGCGCAAATGGCTCAAGAAAATGTGGattgtgttataaattatacGAATGCAACACCGTTCAGCGGGTTCTATCGAGCGGGATATAGCTGTCTCTTTTGctctaaaatatttgaagtaccggctcatttaaaaaaacacacaTTAGAAACACACAGCAAACAGCAAGCGAGACTCAGACCGTCGAGAGCAGTTAAACTCGACGTGACAGGCCTAAAGTGTGAAATATGCGAAGTAAAAATCGAAACACTTGAAAGTGTTTTGCAACACTTGCACTCGATTCACGGGAAGATAATTTACACTTGTATACGCGAATTCTTCGTACCATTCAAATTTCAAAGTGAAGTGTTGAAGTGTGCGGTTTGTTCAGAAGAGTTTCACTGTTGCAAGCTGTTAAACGACCATATGAATAGTAATCACTTTAAAAATTTTGAGTGTCATGAATGTGGACGCGGGTTCATAAGTAAACATTATTTAAGAGAGCACAGACTTCGACATGAAACAGGAGTGTTCAAGTGTAAATTTTGCCACAAAGTGTTTTCAAGCAAAGTGCGCACTACCTCCCACGAACGCACAGTACATATATACAATAACTATTTATACACTTGCGGGTATTGTTCGGAAAGATTTTCCAGTTTACCAAAGAAAAAGCAGCACGAAGCAACACAACATGACACCGaactaactttatttaattgcaCAGCGTGTAGCAAATCGTTCCAAGATTTACGTGTACTAAGAACTcatgaaaaaaatgttcacTTAATGATGCGTGCACAAAAGTGTAAAAAGTGTGAATTCAGTGCGTACTCGTCACAGAATTTGAAAAGGCATATGTTAACACACACTAAGGAGAATAATTTTACATGCGACATTTGTTGGAAATCGTTTGGAGTGAAGTGGTCACTTCGAGAGCATATTATGCGGATGCATGCGAATGATAGGAGATTCAAGTGCGAACACTGTGGGCAGTCGTTTGTGCACAAGTGTGCTTGGAAAACGCATATGCTGACAAAGCATGACGAACCCgagtag
- Protein Sequence
- MNVENNILYSEYVCRCKCCLNDNNLKSLWELNVSDNGEGEIYGQMVVECFALPWYPSDEPEHICEFCVLKLQEAFNFKKNILAVEHALLNGDVKIKEELEAQIDTEENKVLVVKYVPVEDEYQHVEYLEDEEGEEDKEQVSIITELEQTSSGPSTPGASNAIPQRKWPKKKKKHELTKLYKQYTQDNLKEAVKAVRNGELTCNNAAIKYGIPKKTLTVKVNTYVDRERVGQTEDTNDKHYKLIEEIKLLLTHTTAVPFKTKTTRYYCFYCSTDGQHYEDPDELREHTRTKHVHEWTKIDMYMRPQWLNEVIKLDVEDLHCKICLTMVPDWNNLFVHLGVNHDLEFDMAYTRIIPYALSSDLKCFLCKQNFHNFGHLDSHMNNHYSNYICYECGDTFLSASRLDKHLNVHKTGNFPCDYCEKVFKLEKYRAKHVSLVHIQESTVKCLYCPEKFVGIFQRHVHVTEHHKEKIKYMTCEYCGKSYTWKPYFLAHMRRKHGAEKKYKCKHCDKCFLMKYELKNHMVRHTGEKNFICGQCGLGFARMVGLKKHCQNDHQDGATGEDELKDLWSEYYNDGELEIYGEMLSDCFALNWEQPTINSDSDIEHICSTCVSKLHDAVSFKKEILLSAQLLLEEIKNDSYEENMEDDSDTYIETEYLNIEYLEDEDIGKEKSEEDFKKCLEAVKSKTLSQHKASLLYNVPRWTIRNALDKVKVEKDVEEMQSNTLSQYKATSYSVPKKAKHKETVSSDSKVPETKKKKEIKQKNEKNMKSDDNLVDSVKSNESINVSKKKVKEYSETNLKKCVEAVQTNRLSQSKASIMYNVPQLAIHDALEESKLSSSSVPVELIKPNQSKPYTEEDYKKCLEAVKNRTMSRVQACKTYNVPMSSLYAAIKKYFNDADKKTDAQMAQENVDCVINYTNATPFSGFYRAGYSCLFCSKIFEVPAHLKKHTLETHSKQQARLRPSRAVKLDVTGLKCEICEVKIETLESVLQHLHSIHGKIIYTCIREFFVPFKFQSEVLKCAVCSEEFHCCKLLNDHMNSNHFKNFECHECGRGFISKHYLREHRLRHETGVFKCKFCHKVFSSKVRTTSHERTVHIYNNYLYTCGYCSERFSSLPKKKQHEATQHDTELTLFNCTACSKSFQDLRVLRTHEKNVHLMMRAQKCKKCEFSAYSSQNLKRHMLTHTKENNFTCDICWKSFGVKWSLREHIMRMHANDRRFKCEHCGQSFVHKCAWKTHMLTKHDEPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212877;
- 90% Identity
- iTF_00212877;
- 80% Identity
- iTF_00212877;