Bhyb004830.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- ZBTB41
- Assembly
- GCA_027564075.1
- Location
- JANSTU010051175.1:854-2984[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.068 4.1 8.2 1.2 3 23 188 209 186 209 0.96 2 12 0.00019 0.011 16.2 0.5 2 23 220 242 219 242 0.96 3 12 0.0016 0.095 13.3 5.1 2 21 249 268 248 270 0.94 4 12 0.0039 0.24 12.1 2.6 1 23 277 299 277 299 0.98 5 12 3.3e-06 0.0002 21.8 0.3 1 23 305 327 305 327 0.96 6 12 0.00027 0.016 15.7 0.2 2 23 348 370 347 370 0.97 7 12 0.00066 0.04 14.5 4.1 2 23 385 406 384 406 0.97 8 12 0.1 6.3 7.6 2.4 1 21 409 429 409 431 0.83 9 12 8.4e-05 0.0051 17.3 0.5 1 23 438 461 438 461 0.95 10 12 0.00011 0.0066 17.0 1.0 1 23 467 490 467 490 0.95 11 12 0.0026 0.16 12.7 4.3 1 23 496 518 496 518 0.96 12 12 7.4e-05 0.0045 17.5 0.6 1 22 524 545 524 545 0.96
Sequence Information
- Coding Sequence
- ATGCCAGACAACTATTTGATACACGAGAAGGCAGTATTGGAAAACTTAAATGCATCCAGTCAAATGTGTCGCTTCTGTCTAGATGTTGACCAGCCTCTGCGAGTTCTTACGGTGGAGCAACTAAAACAAAGCAATATTCCGGATCTGTACACACGGGCGACTGGTTGCGTGCTAGACCTGACGGACGAATATCCAGAAACAATATGTCAACGATGCGAGTCTAATATGGAGCTGGCTGCCAAAATTAGAATTGCATTTCTTGAAATCGATCAATTCTGGAAACGATTTATATTAAATCATGATCGATACTATTTTCCACCACCAATTGAAGAGGTTAAAATTGAGTCTTATCCTGTTGTAAATATTGAGATCAAAGCGGAACAGATCAAATCAGAAGACATTGTTAATTCTGATAGTGTTGACGTTCACAATACCTCAGATGCAGATGATCCGTGTGGTGATATTGTGACCAGGTCAAAAAGGAAACACACCGATGACGAGAGTGCATCAGAAACTGAGTGCCTCAAAGAGGACGACGATGACCTCAAATTGAATACGTTCTGTGATTTGTGCCAGAAAGATTTTCTAACACTATTAAAGCTAAAGGCACACATAAAAACCAAACACACGAAAAAATACAATAAGGAACAGGAAATCACATGTGGTGAATGTAACAAGGTTCTAAAAAATTCGAATTCGATGCGCAAACACATTAACATCACGCACTCCGGAAACCAGAACATTATGTGTCATGTTTGTGGTAAAATGTGCAAAAATGCTCAGTACCTGAAGGCACACTTGCGGTGTCACGAAGATCAACCGATGAGCTTCAAGTGTGACTACTGTAATATGGAGTTTCGTCTGAAGTACTCGAAGAAACTACACGAACGCGTACATACTGGTGAACGGCCATTTATGTGTGATATTTGTGGATACTCGTTTACACAACGTGGTCTACTGGCTCGTCATAAACTATTGCATACACGTCCCGAACGAGACAAGGCAAAGCCTCGAGTTGTGAACACAGAGCACGGTAATGTAAAGTGTGACATTTGCGATGCTGTCTTTTCGAGTATTGTCAATATGAAAAGTCATCTGAACAAGAAGCACAAACACATTGGTTCTGCGATTTGGGAACAAAAACTTGCTACTACCTGTATGAAGTGTCACAAGCAATTTACTGATTCTAACGATCTGGCCATGCACAAGAAGACACATCTCGATTTTGAGTGTACCATTTGTAAACATCGATTCAGCAGCGAAAAATCACTGGGCTTCCATGCAAAACAACATTCGGACAAGGAACGACCGTTTAAGTGTGACGTCTGTGGTGCTGCCTACATCCGGAAAGCACATCTTTCACAACACTATCAGGGAATGCATACAAATATACGTCCACACATCTGTGCCATATGCAACAAAGGATTCGCACAAACATTTCAACTAAAAACACACATTAAAAATGTCCACAACATCGAAAGACCCTACAAGTGTGAACTGTGTCCAAAATCGTTTGGTACTTCGCATCAACGTACCCAACACAAGCAATTCCATTCCGGTAATTTCCGGTATACATGTACATTGTGCAATAAGAGCTACATCAGTGGTTCTGCACTAACTAAACATCAGAAAAAATGTCAGCTAAAGAATGCAGCGATCGAGGTTACCACTATTAATTCTACTAAACAAGTGGATCCTGGAACAATGAATAGAAAAACTGAGTCCTATGATAATATGCCTAAATTGGAATCTGAGCCATATGTTGGTATGCAGCAGTTGGCCGCTGGAATGGTACCGCCACTACCACATTTGTGTACTATTCAGCCGTTGATGCCTTCGATGGTTGACAAAATCGAACTCGGTCAGGAGCACAGCGACTTTCAGAGGTTATGA
- Protein Sequence
- MPDNYLIHEKAVLENLNASSQMCRFCLDVDQPLRVLTVEQLKQSNIPDLYTRATGCVLDLTDEYPETICQRCESNMELAAKIRIAFLEIDQFWKRFILNHDRYYFPPPIEEVKIESYPVVNIEIKAEQIKSEDIVNSDSVDVHNTSDADDPCGDIVTRSKRKHTDDESASETECLKEDDDDLKLNTFCDLCQKDFLTLLKLKAHIKTKHTKKYNKEQEITCGECNKVLKNSNSMRKHINITHSGNQNIMCHVCGKMCKNAQYLKAHLRCHEDQPMSFKCDYCNMEFRLKYSKKLHERVHTGERPFMCDICGYSFTQRGLLARHKLLHTRPERDKAKPRVVNTEHGNVKCDICDAVFSSIVNMKSHLNKKHKHIGSAIWEQKLATTCMKCHKQFTDSNDLAMHKKTHLDFECTICKHRFSSEKSLGFHAKQHSDKERPFKCDVCGAAYIRKAHLSQHYQGMHTNIRPHICAICNKGFAQTFQLKTHIKNVHNIERPYKCELCPKSFGTSHQRTQHKQFHSGNFRYTCTLCNKSYISGSALTKHQKKCQLKNAAIEVTTINSTKQVDPGTMNRKTESYDNMPKLESEPYVGMQQLAAGMVPPLPHLCTIQPLMPSMVDKIELGQEHSDFQRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212096;
- 90% Identity
- iTF_00212096;
- 80% Identity
- iTF_00212096;