Basic Information

Gene Symbol
dmrta2
Assembly
GCA_027564075.1
Location
JANSTU010049041.1:7651-15620[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-27 7.9e-24 83.4 10.8 1 47 37 83 37 83 0.99

Sequence Information

Coding Sequence
ATGAGTTTGCCGAACGGCGTTGATATGACCAATCTGATGTCACAGCATCCCGTGCTTGGCGGACTGCCGCCGGCTTTCTTTTTGCGCGCCGCCTCCGAACGATACCAACGAACTCCAAAGTGTGCACGTTGCCGGAATCATGGTGTGGTTAGCGCTTTGAAGGGCCACAAACGCTACTGCCGGTGGCGAGACTGTGTATGCGCCAAATGCACGCTAATTGCAGAACGACAACGGGTTATGGCGGCACAGGTCGCGTTGAgacgccaacaggcacaagaggagaacgaagctcgagaattaggacttttatactccagcgttccaggtggtcagcaacagcagcagcagcagcaacaacaacagcagcagcaagaaaatggggcaccgccgtcgggcaactaccacacaggcattccatcgcctccaaatgagcacgattccactCAGCGGGTACACTTTAGCGGCAGTGAATCAGACGTTGAAACCCAGAGAATACGACCCGACCGATTAGGCGCAGCATTCTCACCGGACAGAAATGATAATGAGAGCCCTGGCTCTAAACGCCAGCGAATTTCTACTGAAACCGATCACGATACTGGGTCAGAGTCATCGCCGAGCAGTCCCCGACACAAAAACACAACATTCTCATTGCCTTTGTGTGTTTCACCAACACGAAATGGTCCACCGAGCTCACCCGAATCCGATCTAGATGTCGATTCAGCTCCAGATGATGCCACACCAGAGAACCTGAGCTTGAAGAAAGAGGATTCCCGATCACCGCCAACAACCCCGCACTCAGACACCATAAATATGCTGCGCCACAGTGCTAACAATAATGCCCTTGGAGGATTTATGCCGTATCACCATAATCAATTTCTAGCCGCTATGCCAGCGCAACGTTCACCTATTGATGTTCTGCTAAGAGTGTTTCCAACGCGTCGACGCAGTGAGGTCGAAACCCTACTGCAAAAGTATCGCGGAGACGTTGTGCAGGCAATGGAAGCGATGCTATCGGGTGACGAAGCGATGCACTCAATAACTGTACCCACACCTTCTCCACCGTTTTCCATGAAATCTGCCTTTTCGCCACTTATTGGTCCCGGTGTGTTTAGCTCAGCCGTCGGACGTTACCCAATGTTCCAGCAACAGCACGCTAAACGTTTTCTAGCCGCTCCGTACTCTGGGACCGGTTTTCTATCAACCATAATTCAATCCGATACCGATCAGAGTGAACCGAACGGAAGCAATAATTCGGAGAGATGTGGCAGTGCCGGTGAGTCACAAGAATAA
Protein Sequence
MSLPNGVDMTNLMSQHPVLGGLPPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYSSVPGGQQQQQQQQQQQQQQENGAPPSGNYHTGIPSPPNEHDSTQRVHFSGSESDVETQRIRPDRLGAAFSPDRNDNESPGSKRQRISTETDHDTGSESSPSSPRHKNTTFSLPLCVSPTRNGPPSSPESDLDVDSAPDDATPENLSLKKEDSRSPPTTPHSDTINMLRHSANNNALGGFMPYHHNQFLAAMPAQRSPIDVLLRVFPTRRRSEVETLLQKYRGDVVQAMEAMLSGDEAMHSITVPTPSPPFSMKSAFSPLIGPGVFSSAVGRYPMFQQQHAKRFLAAPYSGTGFLSTIIQSDTDQSEPNGSNNSERCGSAGESQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00210833;
90% Identity
iTF_00210833;
80% Identity
-