Bhyb013971.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- bab1
- Assembly
- GCA_027564075.1
- Location
- JANSTU010002738.1:943-2315[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-17 5.6e-14 51.7 0.0 1 43 28 71 28 73 0.95 2 2 2.5 4.9e+03 -2.5 3.1 6 26 169 191 167 192 0.81
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGCTGGAACACCAATCAAAATCTAATACATCACCTGCGATTTCGCGAACGCGGTCCCCTAAAGTCGTGGCGCCCCGAAACAATGGCTGAGGCCATATTCAGTGTGCTGAAGGATGGACTGTCACTGTCACAGGCCGCTCGCAAATACGACATTCCATATCCGACCTTTGTACTGTATGCAAATCGTGTTCATAATATGCTCGGACCGTCCATTGATGGTGGTACCGATTTACGACCGAAAGGACGTGGTCGACCGCAACGCATTCTGTTGGGCATATGGCCCGATGAACATATTAAGGGTGTTATCAAAACGGTGGTATTTCGAGATGCAAAAGAATTCAAGGAGGAAAACAATATGCACATGAGCTATGGACGTCATTCGCCGGTGTATCCATTTCAAGACGGCCAAATGGGCTTCCCGGGAACACCTTGTTCGAATGGACTTGGCTCACAGGGACCGAATTCAGGCAATGAAACACTGTCACCGGAAGCAGCAGCTGCGGTAGCTGCCGTCGTCGGTCTGCGCCAGCAAATGCAAATGGCCGCGGCAGCCCATCATCACTCCGAATCTGGCGGTGGTGGTTTTAATCTTCCGGCACACTGTGCAAACATTCATGCAAACAATGGTGGCTCCGCTGGTGCGATACCGATGCCAAAGCTTGGTTCACCGGCCACATCGGGTCAACAAATGGGAAATAACGGTGGCGGTGGTGTGCCTATGCCAAGACTTGCCTCGCCAGCAATGGCCGGCATGCCCAACAATGTTGTGCACAGTTTGGCCGGCATACCGGGACTACACATTATGCAGGGCATGATGTCCGGTCAATCTAGTCAAGGCGGTGGCGTAACAATTTCACCGGCTCATGGAAATCATAATTCCCAGAGCAATGCAGCAGCACAGCTCCAACAACATCATCAGAATCATCAGAATGCAATTGCGCATCACAATGCTGCCGCAGCAGCGGCTGCAGCTGCCATGAATATTTCGCGAATTTCATCACCGGCTGGATCGGCGCATGATTTGCGTATGACGAGTCCGGATGAGAATCAAATGCACTCACCGCTGAATATGCCAATGGAGGCCGGTGTAAATTTAGCCGTTGGTGTTAGTGGTATGGCCTACAAACCATCACGTGGCTATTCGCCACCGCGTCCCGAGCACCTGTTTCAGGAAGACATCACCGATTTTGTGACCGCTGTGCCCCGATCGTGTCCGTCGCGCCTAAACAGTTTCAAGGAACCGTCTGGTGGCATTAAAATTGAACCGATGGCAGATTGTCGCGGTGATTGA
- Protein Sequence
- MWQKCWNTNQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKDGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKEFKEENNMHMSYGRHSPVYPFQDGQMGFPGTPCSNGLGSQGPNSGNETLSPEAAAAVAAVVGLRQQMQMAAAAHHHSESGGGGFNLPAHCANIHANNGGSAGAIPMPKLGSPATSGQQMGNNGGGGVPMPRLASPAMAGMPNNVVHSLAGIPGLHIMQGMMSGQSSQGGGVTISPAHGNHNSQSNAAAQLQQHHQNHQNAIAHHNAAAAAAAAAMNISRISSPAGSAHDLRMTSPDENQMHSPLNMPMEAGVNLAVGVSGMAYKPSRGYSPPRPEHLFQEDITDFVTAVPRSCPSRLNSFKEPSGGIKIEPMADCRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00210730;
- 90% Identity
- -
- 80% Identity
- -