Basic Information

Gene Symbol
-
Assembly
GCA_027564075.1
Location
JANSTU010049030.1:12593-18986[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-15 8.9e-12 45.4 0.5 3 89 280 359 278 359 0.87

Sequence Information

Coding Sequence
ATGGACGCATGGCAACAATTTTTAGTCGACACAGATGAGGTACTCGCTATTTCTGACAAAGTGGTTATTCGTGCCGATGATTTGTTGACCTGGATGGATGGCAGCATCGCTTGGTCATGGGGTCTGAAAGCATCGCACTTAAAACGACTTGACGACGAAAAGCCAGACTCTGCAACGCCATCCCTGAAAAACACTCAATTGGATTTCTCGGATATTGATCATGAAAAAGCCATGAACTCGCAATCGAAAATTGCCGTGGTCAGCTATGCCAAATATTGCCGTTATCGTGCTACCCTGAAACGCCTGGAAAATGTGGAAGATGACTGGCTGCGCAATACACTGGTCGAAGCTCTGAGCGGCTTCGTGTCAACCGGACCTGATACCCGCGTTATGTTCTGCAAGGATACATTCGACTATCCAGAGCTGGAAACACATGAACTTCTGTGTAATCATTTGGCTCCGAAACTCAAGGGCAGACCACGTGGTCGCAGGAAAAAGATTCACACTGATTCACCAGAGGCACGATTACGAGGTGATTCACCAGGCAGTGAATCAGCTTGTTCTGAGATATCTGCGTGTTCAGTCGAGAAAGTTTACTCCAAATATTCACCATTATACGTAAAGCCGGAATTCAAGCAAGGCGCTCATGTACTAGCGAAACGTCCACAATTGCGCTACAATCCAAGACCTGCCCGTACGAAAGGACGATCAGAGTCAGAAGACACAACACCCAGTAAGTCTTCACGCATTAAGTCACGTGACTCCAGCAGCGATACCAAATCAGAGATCAAGGAAGAACCAGAGGAAGAGATCAAGCCAGAAGTAGTTTCCGATGAAATGGCGTTTGTCCAAAAGTTATTGCACTTCCATACCGAACATAAAACGCAGATTCCTAAATCGTTTTGGATAGGTTTAAAGAAAATAAATTTACTTGCTGTATACGAGCGTGTTCAGCGTCTCGGTGGCTACTACAATGTAACCGAGAAAAAACTCTGGAAACAACTGTTTGGTGCAAAGACAAATTTGCACAATACTATTTCGCGCAAGAAATACGAACGAGCTATTCTACCGTTTGAGAACTTTAAAATCAAACTCTGTATGAAACAAGTACCTAAGATAAAAGTGGAGAAAGATGAACCACAAAAACCTGCCAAAGCAAATGTCAAGATAGAAAATAACAGTTGCTCTGATACCGAATCTAAAGTTCTGAATAACATTATTAAACCGGAGCCGATAAGCGATGAGTGTCAGCCAAAGAAAAGTGGTGAACATCATTTGACTACAGCCGAAATAACCGAAATCCAACGAAAAATTCGTGAGAAAGATTTTGAAAAAGAAATGTCACCTGTCTCAGTACCTGTTACAGTTATTCTAGATGGTAAGACTGTCGAGTGTCATACATCGTCACCGTCACAGATAAATATTCAGCAACCACATACAACTATTACAGTACATCAGACTACGATTCATCCGCAGAGTATACATTTGTCTCCACATATGTCTCAAAATACAGCGCAAAATCAACAGATAACCAATCAAATTCAGATAACGAATCAAATTCAAATTCAGCAGATCACAGTTCAACCAAATAATAGCAATAGCAATCGAAACGGTGATCAATACACGTGTAGCATTAAACAAGATAAAAATGGACAAGAAGTACAGATTGAATCCATTGGGGAATCTACTAGAATTATTAAACAGCAGTCCTCTGTGGACGAGTTTAGTTCAAATTCCAAGAATGGATCAACTAAGACGAGTACATTGCGTCACGTTCGAGTAAAAGCCGATCGCAGAAGTGAAACTAAGAAACCGATTGTAGTTCAACAGCAACAGTGCAGCCAACCAAATGAGAAAGAAAACATTCCATACCTGTCTGGATCTAAGACGACTACTATTACGCCAATACTGGGCAACAGTAATAAAGACTTACGTCTGCATTCCTCTGAAATTATTGATTTAATCGACAGTGATAATGAGAGTAGTAGTCCAAGCCAGGGTTCTTCACCTCAGCATCCACAACACCAACAGATTCAGTCGATACCAGCCACATCGAATATGTTCCCTCATATGAAGAAACGTAAACTGGAGATTCTCCGAGAAGGTGGTCTTGAAGTTACCGCCATTCGCACTACAGGCAACATGATACCAAATCATATGTTTGGCTCGCACAGTGGCATAACGACTCCGTGCGTAGATGAGAAATCAACTCTCCGTCCGGAAATCGTTGGTAGTATTCCGTCCGGCTCTGGTGGTGAAACATCAAACGGTTATTCAAGATCACCAACACCAAAGTTCCAGTCAAAGTGTATGTTTACCCGAACAAGCAAGGTTTTCGGTAATCCAAAAATTGAAATACCTGCACCTCAGCCAACGAATAGCAGTAGCTGTGAAGTATTGGATCTGACCGTACAACGTCGTGAGCGTCGTAAATCTATAGATTTCTCTCGTCTACCAGCAACATTGTCCGTTAGTGATTTCACAAATAGTCATCTGAAGTCTGATCCAAGTCTTCAAATAACATTAGTTCCTTCGCTTACACATGTCCAGAATATTCACAACTCCCAGAACCATAACATAAAGCGACGTTCAGATCCACCTAGCTATATGCCGCCTGAGAAGCGTACAGCGATGCAACAACCGCCCGTCACGATAACACCAAGCAACAGACCAAGCCAAAGTAGTTCATCGTCACCATTTCCGCCAGCAGAGCTTAAAATCAATCCGTTTATGCTACAACATTTAATGGCTCAGCTACCAATGAGCACTTCTGCAACGGCTTCCATTAGACCACCGGCCACATCACCGGTGGTCACAGATGTCCCTGCCAATGCTTCATCTCCCAGTTCACCACAACACCCTCAAATGGCTGCCAATCCATTCCTATCGATGTTGGATCCAATGTACCTGTCCGCACTGTACTCCAATCCGAGTCTGTTTTTCCAACCATCTTTTCCACCCGAATTGCTACAGCTCTACAAGAATTTTCCAATGGACACCGTTAAAGTTCCGATTTCTAAGAGTTAG
Protein Sequence
MDAWQQFLVDTDEVLAISDKVVIRADDLLTWMDGSIAWSWGLKASHLKRLDDEKPDSATPSLKNTQLDFSDIDHEKAMNSQSKIAVVSYAKYCRYRATLKRLENVEDDWLRNTLVEALSGFVSTGPDTRVMFCKDTFDYPELETHELLCNHLAPKLKGRPRGRRKKIHTDSPEARLRGDSPGSESACSEISACSVEKVYSKYSPLYVKPEFKQGAHVLAKRPQLRYNPRPARTKGRSESEDTTPSKSSRIKSRDSSSDTKSEIKEEPEEEIKPEVVSDEMAFVQKLLHFHTEHKTQIPKSFWIGLKKINLLAVYERVQRLGGYYNVTEKKLWKQLFGAKTNLHNTISRKKYERAILPFENFKIKLCMKQVPKIKVEKDEPQKPAKANVKIENNSCSDTESKVLNNIIKPEPISDECQPKKSGEHHLTTAEITEIQRKIREKDFEKEMSPVSVPVTVILDGKTVECHTSSPSQINIQQPHTTITVHQTTIHPQSIHLSPHMSQNTAQNQQITNQIQITNQIQIQQITVQPNNSNSNRNGDQYTCSIKQDKNGQEVQIESIGESTRIIKQQSSVDEFSSNSKNGSTKTSTLRHVRVKADRRSETKKPIVVQQQQCSQPNEKENIPYLSGSKTTTITPILGNSNKDLRLHSSEIIDLIDSDNESSSPSQGSSPQHPQHQQIQSIPATSNMFPHMKKRKLEILREGGLEVTAIRTTGNMIPNHMFGSHSGITTPCVDEKSTLRPEIVGSIPSGSGGETSNGYSRSPTPKFQSKCMFTRTSKVFGNPKIEIPAPQPTNSSSCEVLDLTVQRRERRKSIDFSRLPATLSVSDFTNSHLKSDPSLQITLVPSLTHVQNIHNSQNHNIKRRSDPPSYMPPEKRTAMQQPPVTITPSNRPSQSSSSSPFPPAELKINPFMLQHLMAQLPMSTSATASIRPPATSPVVTDVPANASSPSSPQHPQMAANPFLSMLDPMYLSALYSNPSLFFQPSFPPELLQLYKNFPMDTVKVPISKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00210593;
90% Identity
-
80% Identity
-