Basic Information

Gene Symbol
ARID5B
Assembly
GCA_010015015.1
Location
JAAAKO010000756.1:29029723-29039481[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-15 1.5e-11 44.9 0.4 4 89 374 452 371 452 0.88

Sequence Information

Coding Sequence
atgaaattaaaaaaaaaacagcgaaAGCGTTTCCGCGGAAGTGAGCGAGCACAGCGTCCGGTGCAGCGCTCAAATGCACTCTGTGTAATTGCATTTTCGAAAATTATGCATGCCAATTTCGTCGGTGTCGTCAAAAGTGGAAATTATGGTTCTGTGCGCGGCGCATTCTGGCTCGTGATAATGATCTCAAGAAAATTACATGCTTTTGCAATATGCGCACGAGCAGAGTATGCCCTCGAGCGGAGCGGCGGCAGCGCGACGTATGCATGCGCACAGGGAACAGCCACAAAAGGACTCCCCTCTCGgagtGATGAGGTTCTTGCTATTTCTGATAAAGTGGTAATTCGGGCCGATGATTTGTTGACATGGATGGACGGAAGCATCGCATGGACGTGGGGTCTGAAGGCGTCCCATTCGAAACGGAAGTCTGATGTGGAAGATGTTGCAACACCAGCGCCATCCTTAAAGAACACACAACTGGATTTTTCGGATATTGATCAAGAGAAAGCCATGAACTCGCAATCGAAAATTGCCGTGGTCAGCTATGCCAAATACTGTCGTTATCGCGCTACTTTGAAACGTCTAGAGAACGTCGAAGATGACTGGCTGCGCAATACACTAGTCGAAGCGTTGGGTGGCTTTGTGTCTACCGGGCCAGATACTCGTGTGATGTTCTGCAAGGACACATTCGATTATCCAGAGCTGGAAACACACGAGCTCCTGTGCAATCATCTGGCACCTAAGCTCAAGGGTAGACCACGTGGGCGCAGGAAAAAGATTCACACTGACTCACCGGAGGCTCGTCTGCGTGGTGATTCGCCGGGCAGTGAGTCCGCGTGTTCCGAGATCTCTGCGTGTTCCGTGGAGAAGGTGTACTCCAAATATTCGCCACTCTATGTCAAGCCGGAATTCAAACAAGGCGCTCACGTACTGGCAAAACGTCCACAGTTGCGCTACAATCCCAGACCGGCACGCACGAAAGGCAGATCAGAGTCGGAAGACACGACGCCCAGCAAGTCGTCACGCATTAAGTCTCGTGACTCTAGTAGCGATGCCAAATCCGAAACTAAGGATGACATTGAACTTGATATCAAGCCTGAAATTGTATCTGACGATATGGCTTTCGTCCAGAAGCTGCTTCACTTTCACACTGAGCATAAAACGCAAATTCCAAAATCATTCTGGATaggtttaaagaaaataaatcttcTCGCTGTGTACGAACGAGTTCAACGCCTCGGCGGTTACTATAATGTGACAGAGAAGAAACTGTGGAAACAGTTATTCGGTGCAAAGACCAACCTGCACAATACGATTTCGCGTAAAAAGTACGAACGGGCCATATTACcgtttgaaaatttcaaaatcaaagAATTATGTTTGAAACAAGTACCTAAGATGAAGTGTGAGATTGATGATCCACAACCTGCCAAAGCGAGCATTAAGCTAGAGAAGGATTGTTCTGATAATGaattaaccataaaaaacattaaacctGATCCGATAAACGCTGATGAAGTGGTCAAAGAGAGTGTAGAACATAAACTCACTGCGGCTGAAATGTCAGAGATTCAACGAAAGGTGCGTGAAAAGGAATTTGATAAGGAAATGTCACCGGTGTCCGTACCGGTCACAGTTATTTTAGGCGGAAATACTGTTGAGTGTCACACGTCGTCTCCGTCACAGATAAACATTCAGCAACCACACACCACCATAACGGTACATCAAACTACAATTCATCCTCAAAGCATAAATCTGCCAGCGCATATGACCCAAAATACGATGCAGAATCAACAGATTACAAATCAAATACAGATcacaaatcaaatacaaattcaGCAAATTACCGTGCAACCTAATAACAATAATGGAAGTAGACACGGTGACCAGGGTCAGTATACGTGCAGCATTAAACAAGACAAGAATGGTCAGGAGGTTCAAATCGAGTCCCCGGGTGAACCAGCCAAAATTATAAAGCAGCAGTCGTCTGGGGAAGAGTTTAGTTCTCATTCCAAGAACGGTTGTTCGAAGACAAATTCATTGCGTCATGTACGAGTCAAAACCGACCGAACACGTGAAGCTAAAAAACCGGTAGTAATACAACAACAGCAGGGCACACAACCAAATGAAAAAGAGAACATTCCATATCTGTCCGGCTCTAAGACAACAACCATAACACCAATACTGGGCAATAGCAATAAAGACCTGAGACTACATTCCTCGGAAATAATTGATTTGGTTGACAGCGATAATGAAAGTAGTAGTCCCAGTCAGGGTTCCTCGCCGCAGTATCCACAGCATCCTCCACAGCATCAGCAAAATCAGCAGCATCATCATCAGAATCATTCGCAAAATCAAGTGAGTCAGTCTGTGCCAGCAACCTCGAATATGTTTCCTCACATGAAAAAGCGTAAACTGgaaattctgcgcgagggcggCCTTGAAGTGACTGCCATAAGTAATTCTGGCAATATGATAACGAATCACATGTTCGGCTCTCATAGTGGCATCACGACACCATGCGTGGAAGAAAAGTCAACGTTACGTCCTGAAATTGTAGGCAGCATTCCGTCCGGATCGGGCGGCGATACCACAAACGGATTCTCAAGATCGCCGACTCCAAAATTCCAGTCAAGATGTATGTTCACCCGTACCAGTAATGTTTTTGGTAACCCCAAGGACCTGATGCCAGCTAAAGATCCACCGACTACAACTAGCAATGAAGTTTTAGACCTAACCGTACAGCGTCGAACGTCGGTGGACTTATCCCGATTGCCAGCCACGTTGTCTGTCAGTGACTTTACAAACAGTCATCTGAAATCAGATCCAAGTCTACAAATAACTCTTGTTCCTTCACTGACCCACGTTCAAAATATTCACAATTCGCAGAATCATAATATAAAGCGACGCTCAGATCCACCCAGCTATACACCGCAAGAGAAAAGAATGGCTATACAACCACCCGCCACCATAACGCCTAGCAACAGACCAATCCAAAACAGTTCACCACCCTTTCCACCAGCTGATCTTAAAATGAATCAGTTTATGCTGCAACACCTAATGTCTCAGCTGCCGGTTAGCACCTCTGCAACCGCTTCTATAAGACCAACGCCGGTAACACCACCAAGCGTCTCTGCTGCCACCATTACGGCCGTATCACCAGGCGTTTCTGCAAATGCCTCGGCGTCAGCATCATCATCAAGTCCACCCCAATTTCCACAGATGACTGCAAATCCATTCCTTTCGATATTCGATCCGTACCTGTCCGCATTCTACTCCAACCAGAATATGCTATTCCAGCAGTCATCAGCAGAATTGCTGCAGCTCTACAAGAACTTCCCTCTGGAAACGGGCAAAGTTCCAATTTCGAAAAGTTAG
Protein Sequence
MKLKKKQRKRFRGSERAQRPVQRSNALCVIAFSKIMHANFVGVVKSGNYGSVRGAFWLVIMISRKLHAFAICARAEYALERSGGSATYACAQGTATKGLPSRSDEVLAISDKVVIRADDLLTWMDGSIAWTWGLKASHSKRKSDVEDVATPAPSLKNTQLDFSDIDQEKAMNSQSKIAVVSYAKYCRYRATLKRLENVEDDWLRNTLVEALGGFVSTGPDTRVMFCKDTFDYPELETHELLCNHLAPKLKGRPRGRRKKIHTDSPEARLRGDSPGSESACSEISACSVEKVYSKYSPLYVKPEFKQGAHVLAKRPQLRYNPRPARTKGRSESEDTTPSKSSRIKSRDSSSDAKSETKDDIELDIKPEIVSDDMAFVQKLLHFHTEHKTQIPKSFWIGLKKINLLAVYERVQRLGGYYNVTEKKLWKQLFGAKTNLHNTISRKKYERAILPFENFKIKELCLKQVPKMKCEIDDPQPAKASIKLEKDCSDNELTIKNIKPDPINADEVVKESVEHKLTAAEMSEIQRKVREKEFDKEMSPVSVPVTVILGGNTVECHTSSPSQINIQQPHTTITVHQTTIHPQSINLPAHMTQNTMQNQQITNQIQITNQIQIQQITVQPNNNNGSRHGDQGQYTCSIKQDKNGQEVQIESPGEPAKIIKQQSSGEEFSSHSKNGCSKTNSLRHVRVKTDRTREAKKPVVIQQQQGTQPNEKENIPYLSGSKTTTITPILGNSNKDLRLHSSEIIDLVDSDNESSSPSQGSSPQYPQHPPQHQQNQQHHHQNHSQNQVSQSVPATSNMFPHMKKRKLEILREGGLEVTAISNSGNMITNHMFGSHSGITTPCVEEKSTLRPEIVGSIPSGSGGDTTNGFSRSPTPKFQSRCMFTRTSNVFGNPKDLMPAKDPPTTTSNEVLDLTVQRRTSVDLSRLPATLSVSDFTNSHLKSDPSLQITLVPSLTHVQNIHNSQNHNIKRRSDPPSYTPQEKRMAIQPPATITPSNRPIQNSSPPFPPADLKMNQFMLQHLMSQLPVSTSATASIRPTPVTPPSVSAATITAVSPGVSANASASASSSSPPQFPQMTANPFLSIFDPYLSAFYSNQNMLFQQSSAELLQLYKNFPLETGKVPISKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00211423;
90% Identity
-
80% Identity
-