Bcin001643.1
Basic Information
- Insect
- Bolitophila cinerea
- Gene Symbol
- sip1
- Assembly
- GCA_010015015.1
- Location
- JAAAKO010000756.1:6210987-6213729[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-83 5.6e-79 265.9 12.8 1 275 406 673 406 673 0.98 2 2 0.032 3.7e+02 0.9 0.1 245 271 688 714 677 718 0.83
Sequence Information
- Coding Sequence
- ATGTCCGATGAGGAGTATGAAAAGTTTGAGATAAACGATTATGACCTTGAGAATGAATTTAATCCAAATCGAAGGCGCAAACGTCccacaaaaaatcaacaaatttatgGTGTCTGGGCCGATGACAGTGACAATGAGGCGCCGGATAATTCGTCCAGTCGAAGGCGCGGTCGCGGTCGTCGCGATTCTACCGGAGGCAATCGGTCAACCGGCAAAGATTACACGGCTCCAATTGGTTTCGTGACAGGAGGAGTGCAGCAATCGGGCAAGAAAAAAGAGCCTATCGCAGAAGATGATGAAACAAAATCTGATAACGAAGATGATAACGAGGACAATGAGACGCCAAATCGAAAGATGGACAACACTTCCAGTGATTCGTCCGAGGAAGAGGTTCGACCGTCGATGTCCAGTATGGCCGGTTTCCGAACTAGTATGCCCAATCCGAGTGTATCAAGCAAGGGCACAGCTGCTTGGGAACAACACACAAAGGGTATCGGTGCGAAATTGTTGCTGCAAATGGGATATCAGCCAGGAAAAGGTCTGGGCAAAGATCTGCAGGGAATTGCACAGCCAGTACAAGCTCATTTGCGCAAGGGCCGCGGAGCCATTGGAGCATATGGACCAGAGCAAGGACAAACCATTGGCGATGGAAAGTCTGGCAAACCTAAAGTTGATATTGATGAAAAAGAAACCAAAGAATTCCAGGCCAAAATGAATCGTTGGAAAAGCAACACTCAGCAAAAAGACATGGGCTCTGGCAAAAAGAATCGATACTACTATAAAAGCGTACAGGACGTCATTGATAAGGGAAAATCTAAGAACTACATTCTGTCTGATCGCATTAGCAAGAATATGAATAATGTAACGGTTATTGATATGACAGGACCAGAAAAACGTGTATTGAGTGGATATCATGCGTTGGGTCAGTCAAGAACAACTGAAGAAACACTGTACGAGCATCGAGctgcaaaaaaatgttcaaacttTAGTTTGCCCGAGCTTATGCATAATCTACAGCTAATCGTTGATCTTTGTGAACAGGACATTATTACAATTGATAAGAAGCAGCGTAATGCCACTGATAGACAGGAAGCATTGAAGCAGGACAAGGAAAGTCTAGAAAAGATTATAGATCTTGAGGGCGATCATATCAATACGCTTGAGGGTGCCATGGAGCTGGTTAACAGACTAACATCTCCCGAAAGCAAGCTTGAACTTGACGAAATCGCAGagattttcattgAACTTCAAACCGACTTTATGCCAGAGTTTAAAGAGTTTGGCCTTGGCGATCTTGCACCGGGTGTAGTGGCACCAATAATTCAGTTACAGCTAGTCGATTGGGCTCCTCTGGTAGAACCaactaaacacacacatattgcTCAGAAATGGCGTGAAATTCTGAGCACCGATCATGCCCTGGACCAGACAAACGTTTTCGAACCATATTCAGCACTGATTTGGTCCGGTTTTGTACCCAGTATACGTACTGCTATTGGAGAGTGGAATCCACGTCAACATGAGCCTATGGCAGCTTTGCTGGATGCATGGGCTCCGTGGTTGCCGAGCTGGACACTCGACAATTTACTGGAGCATCAAGTTTTGCCACGTATTAACAATTGCGTCTTAGATTGGAATCCACTCACAGATCACATTCCTATTCACACATGGGTGCTACCTTGGACGCAGTTACTCGGCGAAAAAATGCAAGAAGAGGTGTATCCCAAGATCCGACTCAAGTTGGGACATGCGTTGTCTGCTTGGATGCCGAATGATCGGTCTGCCTTGGCTATGATTGAACCGTGGTTTGGAGTGTTTGCAGAAGGAGATATGAATAGTTTCCTTGTGAAGCACATCATCCCGAAACTTCACTTGAGCTTAGAAAAACTGATTATCAATCCGGTGTTGCAAGACTTAGAATACTGGAATCAAGCCTATGAATGGAACAAGATCGTACCGCCCAATCTAATGGCACAGATGCTTGCGAAGAATTTCTTTCCAAACTGGATGCAAACTCTGGTCATCTGGCTAAATCAATCTCCGAATTTGGATCAAGTATCACGTTGGTATTCAGGCTGGAAGCGATTGCTGTCTGTAGATATCTTAAAGCAAACAAATATTAGTGaattcTTTCGGCGTGCTCTGGATATGATGCACCGTTCGTCTGGAGTGCCAATACCTGTAAACATTGAGTCAACTTTGCCTCCACCACCGACTCCACCAGTGTTACTTGTGACACCAGTAGCACTCATGGACATGCATCTAGTGGCACCGCCACAGTTAGAGTTCAAGGAACTGGTTAGCCAGAAGTGTGCCGAACGCGGAATTATGTTTGTGCCAATGCCTGGACGCCGCGAGGACGGAAAACAGGTGTATCGAGTAGGAAAGCTTTTCTGTTACATCAACAAGTCCGTGGTAATGGTCAGCGATATAAGTTTCACTAATTGGGCTCCTATTTCGATAAAAATGCTTCTTGAACGTGCAGTCACAGGAAACATGTATTAA
- Protein Sequence
- MSDEEYEKFEINDYDLENEFNPNRRRKRPTKNQQIYGVWADDSDNEAPDNSSSRRRGRGRRDSTGGNRSTGKDYTAPIGFVTGGVQQSGKKKEPIAEDDETKSDNEDDNEDNETPNRKMDNTSSDSSEEEVRPSMSSMAGFRTSMPNPSVSSKGTAAWEQHTKGIGAKLLLQMGYQPGKGLGKDLQGIAQPVQAHLRKGRGAIGAYGPEQGQTIGDGKSGKPKVDIDEKETKEFQAKMNRWKSNTQQKDMGSGKKNRYYYKSVQDVIDKGKSKNYILSDRISKNMNNVTVIDMTGPEKRVLSGYHALGQSRTTEETLYEHRAAKKCSNFSLPELMHNLQLIVDLCEQDIITIDKKQRNATDRQEALKQDKESLEKIIDLEGDHINTLEGAMELVNRLTSPESKLELDEIAEIFIELQTDFMPEFKEFGLGDLAPGVVAPIIQLQLVDWAPLVEPTKHTHIAQKWREILSTDHALDQTNVFEPYSALIWSGFVPSIRTAIGEWNPRQHEPMAALLDAWAPWLPSWTLDNLLEHQVLPRINNCVLDWNPLTDHIPIHTWVLPWTQLLGEKMQEEVYPKIRLKLGHALSAWMPNDRSALAMIEPWFGVFAEGDMNSFLVKHIIPKLHLSLEKLIINPVLQDLEYWNQAYEWNKIVPPNLMAQMLAKNFFPNWMQTLVIWLNQSPNLDQVSRWYSGWKRLLSVDILKQTNISEFFRRALDMMHRSSGVPIPVNIESTLPPPPTPPVLLVTPVALMDMHLVAPPQLEFKELVSQKCAERGIMFVPMPGRREDGKQVYRVGKLFCYINKSVVMVSDISFTNWAPISIKMLLERAVTGNMY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00211623;
- 90% Identity
- -
- 80% Identity
- -