Basic Information

Insect: Blattella germanica
Gene Symbol: L
Assembly: GCA_003018175.1
Location: PYGN01000905.1:525087-553156[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.48 28 6.1 5.9 1 23 3 25 3 25 0.98

2 23 2.4e-06 0.00014 22.7 4.3 1 23 31 53 31 53 0.99

3 23 4.1e-05 0.0024 18.9 0.2 1 23 59 81 59 81 0.98

4 23 2.2e-05 0.0013 19.7 0.2 1 23 116 139 116 139 0.98

5 23 0.079 4.6 8.5 0.1 1 23 244 267 244 267 0.91

6 23 0.45 26 6.2 0.1 3 23 285 306 283 306 0.93

7 23 0.82 47 5.3 0.3 3 23 371 391 370 391 0.98

8 23 3.9 2.3e+02 3.2 1.8 2 13 432 443 431 456 0.80

9 23 0.099 5.7 8.2 0.1 3 23 466 487 464 487 0.93

10 23 0.047 2.7 9.2 0.3 1 23 492 515 492 515 0.92

11 23 0.036 2.1 9.6 4.4 1 23 593 615 593 616 0.95

12 23 0.007 0.4 11.8 4.6 2 23 728 749 727 749 0.96

13 23 0.13 7.4 7.9 0.5 1 23 759 781 759 781 0.97

14 23 0.58 34 5.8 0.7 2 23 789 810 788 810 0.96

15 23 0.0003 0.017 16.2 0.1 1 23 941 964 941 964 0.95

16 23 0.3 17 6.7 0.3 1 23 968 990 968 990 0.97

17 23 0.69 40 5.6 0.9 1 23 998 1020 998 1020 0.96

18 23 0.0097 0.56 11.4 0.1 1 23 1028 1050 1028 1050 0.98

19 23 2.7 1.5e+02 3.7 1.7 1 23 1057 1079 1057 1079 0.94

20 23 0.00023 0.013 16.5 1.5 2 23 1154 1175 1153 1175 0.97

21 23 3.1e-06 0.00018 22.4 1.0 1 23 1186 1208 1186 1209 0.96

22 23 2.6 1.5e+02 3.8 0.0 3 23 1240 1261 1238 1261 0.92

23 23 5.7e-05 0.0033 18.4 1.7 1 23 1262 1285 1262 1285 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.48	28	6.1	5.9	1	23	3	25	3	25	0.98
2	23	2.4e-06	0.00014	22.7	4.3	1	23	31	53	31	53	0.99
3	23	4.1e-05	0.0024	18.9	0.2	1	23	59	81	59	81	0.98
4	23	2.2e-05	0.0013	19.7	0.2	1	23	116	139	116	139	0.98
5	23	0.079	4.6	8.5	0.1	1	23	244	267	244	267	0.91
6	23	0.45	26	6.2	0.1	3	23	285	306	283	306	0.93
7	23	0.82	47	5.3	0.3	3	23	371	391	370	391	0.98
8	23	3.9	2.3e+02	3.2	1.8	2	13	432	443	431	456	0.80
9	23	0.099	5.7	8.2	0.1	3	23	466	487	464	487	0.93
10	23	0.047	2.7	9.2	0.3	1	23	492	515	492	515	0.92
11	23	0.036	2.1	9.6	4.4	1	23	593	615	593	616	0.95
12	23	0.007	0.4	11.8	4.6	2	23	728	749	727	749	0.96
13	23	0.13	7.4	7.9	0.5	1	23	759	781	759	781	0.97
14	23	0.58	34	5.8	0.7	2	23	789	810	788	810	0.96
15	23	0.0003	0.017	16.2	0.1	1	23	941	964	941	964	0.95
16	23	0.3	17	6.7	0.3	1	23	968	990	968	990	0.97
17	23	0.69	40	5.6	0.9	1	23	998	1020	998	1020	0.96
18	23	0.0097	0.56	11.4	0.1	1	23	1028	1050	1028	1050	0.98
19	23	2.7	1.5e+02	3.7	1.7	1	23	1057	1079	1057	1079	0.94
20	23	0.00023	0.013	16.5	1.5	2	23	1154	1175	1153	1175	0.97
21	23	3.1e-06	0.00018	22.4	1.0	1	23	1186	1208	1186	1209	0.96
22	23	2.6	1.5e+02	3.8	0.0	3	23	1240	1261	1238	1261	0.92
23	23	5.7e-05	0.0033	18.4	1.7	1	23	1262	1285	1262	1285	0.98

Sequence Information

Coding Sequence: ATGCCCTTCCGCTGCGAGTTCTGCAGTCGCCTCTTCAAGCACAAGAGGAGTCGGGACCGGCACATCAAACTGCACACTGGCGACAAAAAGTACAGGTGCACCCACTGCGAGGCTGCCTTCTCCAGGAGCGATCACCTGAAGATCCACATGAAGACCCACGACAACCAGAAGCCCTTCCAGTGCACGGTCTGCAACAGAGGCTACAACACGGCCGCGGCTCTGACGTCACACATGCAGAACCACAAGAAGGACCAGCAACAGCAGCAACAGAACGGacacaacaacagcaacagcagcCGCGCCAGCAGCAACAACACCCCCAGCCCTGGCTCTGCTATCCCTTCCTTCAGGTGCCTCCAGTGCGGCGAAACCTTCCGCAAACCCGAGGAGCTGCAGGGTCACATGATTACGCAGCACAACGTGGAGACTGGAGGATCGCCCAGAGGACTGCTCGGGGGCCTGATGCTGGGGGACTCGCCCCTCACAAGATCTCCCTCCCGGCCTCTGCCGTTCCCCACACCCAAACTAGCGTGCATCTACTGCACCAAGGACAGCTTCAACACCATGGAGGCCCTCCAGTTACACGTCCAAGCCATGCATGGTTCGATATTGAACGGCGACCTGCGGGAGTTCGCGAGCCCGAGCCTGACGCCTCACCACCTGCTGACGTCACCGCCCTCCTCCGGCAACAACAACCACACCGTGACGTCGACCGCTGCGCTGATGCCTTACTCCTGCGACTTGTGCACGATGCGGTTCGGAACCGTCCAGGGCCTCCAGAAGCACGCGCTGGCCGTGCACGGGCTGATGGGTGGGGGCGGCGACTCGGGGGCGGCGAGCCCGGGCCTCTTCTGCGTCCAGTGCTCGCTGTCCTTCCCCTCGGCCGCTCTTTTCGCCGAGCACTATATGCTGTTGCACGGCTCAGCATCGGCGATGCCTTCCGCGCCTGCCCCAGAGCAGCTCAAACCCACGGACCTCAGCAAGAAAGCCGCCGCTCCGCACCGAGGACCGCACCACGACGATCGGTCGCCCTCCGCCAAGCGCCACAAGTCCTCCGACGCGGACGTGTCCTTGCAGGTGAACCAGTACGAGCACCCCGGCACCCTCCTCTGCAACCAATGCAGCGCAGCCCTTCCGGACTTCGAGTCGTTCCGGACGCACCTCAAGTCGCACCTGGAAGAAGCCGGGGGCCTCCGGGGGCTGCTGGGGGGAGGCGGCGACCTCATGGGGATGCTCTCGAGCCCAGAGACTACTCGCAAGAGCCCAGCAGCGGCGGCGTCTTCCGGGGCCCTCATCTGCCCCCACTGCGGGGCCAAGTTCTCCGGAGCAGACGAGCACCAAGCCTTCGAGCAGCACATCACCACTCACTTCATGGCCACGGCCACCGAGTACGGCTGTCAGAGCTGTCTCAAGCTGTTCCCCAAACCCGACGAGCTGCAGAAGCATCTCATGGATATTCATGCACACCACCTCTACCGCTGCTCCTTGTGCAAGGAAATGTTCGACTCCAAAGTTGCCATTCAGGTTCACTTTGCGGTGAAACACAGCAACGAGTGCAAGTTGTTCAGGTGTACCGCCTGTACTTCAGCCACGGCCATGTTCCGTTCAGAATTGGACTTTGGCCTCCACGTGAGGTCTGTGCATGCCCCTGTCCCTCTGCTCACGGGGGCGGCCACCAAGGCCCCGGCCCAGCAGCCGTTTCGATGCCTCTTCTGTCGTCTCAGCTTCGCCACGGAACTTGAGATGCAGTTCCACCTGGCGGCGCACTCGAAGCAGTTCCACTGCCCTCTGTGTCAGGAAGCTTTCCACGTTGAGTTCCTCCTGGACAAACACATGCAGACGCACCACAGTTCTCAGGTAATGAACAGCAACGGAGCCAGTTCGGCCGAGAACCTGACCCAGCAACAGAAATCCCCAAAGAGCAAATCTTCTGGCGTCCCACCATCTTCGACAGCTCTTACAAACAGCAACAACTCGTCGATATCTAGCGGCAGCACTGGGCGCAATAGCACCAACAACATTGAAAACAGCAGCGGCAAGAAAGGCGACCAAGCGAATGGCAACTGTTGCTGCGACATCTGCGACCGATGCGACTTTGGCAGCGAAGCCGAACTCGTGGCACATCGCAAGTTGGTGCATCACATCAAGCCCAGCACTGGCAAAAATGGCGCCGTGAGCCTTCACTGTGCTTATTGTAGCGAGAACTGTAAGTCTCGAACCGAACTGGAAAACCACATGAAAACGCACTCACAGGGCAGCAGTGGCTCGGGAAAACACAAGTGCAACATTTGCGACGAACTGTGTCCCTCGGCCGCGGTGCTCGCGGAACACAAGCTCACGCACTGCAAAGTTATCTCCGGGAGCACCTGTACGCAGTGCAAAGCGACGCTCGTCAGCGAGGAACAGTTCTACACGCATCTACAACAACACGGTGCTAACAATAACAATTCTAGTTCTAGTGCTCAAGGAAACGCCAACAGTGCTCATCAGCAAGTGGTGTTGCCGACTCCTTGCGTCGTTTGCAGACAAACTCTCATCTCCGACATAGAAGTGAGGATGCATGCAAGGTTTCATCTGAAGAACTCCGCTGCGTTGACGGCCACCGAACCCATGTACCAATGTTGTTTGTGCTTGAAGCAGTTTGAGATGCAGAACCTTATCATTGCAGGTGGAAACAATGGGGCTGTGCCTAGCATCCAGGGCGCAACTTACATTTGCAAAGACTGCTACCACTGCCACAGCAAGTCTTCGCCCCCTCAGGCTCAGCAGCCCCTGCCACAGACCTCCCAACAGCAACAGTTTGCTTCGCAAGAGCAGGTCTTTCGGTGCTCGGAGTGCCAAGTGAAGTTCGAGAACAGTTCCGCTCTTGAGGCCCATCTTGTTTCTGTTCATCGGAAGACCTACCAATGCATCAAATGCCAGATGAGTTTTGAGACGGAGCGAGAGATACAGATGCATGTGGCCACTCATCTATTAACCGAAGGAAGCAGTCACGAGTGTCACTTGTGTCGTCGGCTCTTGGCCACTCCTCTCAAACTCCAAGCCCATCTCATTGAACACACGTTTGCCGGTTGCGGAAGCTACACTTGCTACCTGTGCAGTGCCGTGTTCACTGCGGCGCAGGGCCTTCAACAGCACATGCTGGAACATGGATTGGCTGCGAGGCCTTACGACTGCTCTCGATGCAGCCTGCGCTTCTTTTTCCGTGCAGAATTGGATAATCATAGTTACAGTCACTCCGACGAGAGTAACGCGGCTATGGGTAACCCTCCATCACTGCTGCTTGACGGAACCGACTTGGCAAACAAGGCCTTGTACTACCACCATCTCAGCTCCAATGGAAGTTACGAAGCAGCCAACCCAGACATGCATTATTACAAAACACTGGTCCAAGAATCTTCGAAGCAGCAGAAACATAAAAACAGCAAGGGCCATGGCAGCAAAGGGACCGCCATGTTGAAGTGTTTGGAGTGCAACAAAGAATTCAGCAGCCTCATGGGGTTGCAAGCGCACCAGAGGCATCACAAACATTCGTCGAGCTCAAGCAAAAAAGTCTACACGTGCAACGAATGTGGCAAAGAGTTTGGAATGGCCAGAAACCTCAGCGTCCACATGCGATCTCACCACGAAGATCACGGAGGGGATGAGCGGTCCTCCGAAGACATGAACCTGGAGCTGGAAGAGCATTACCAAACCGAGGGCAAGAGCGGGCAAATCTGTCCGGTCTGTCGTAGAGATTTCTTGGACGTGGAATCGCTCGAAAGTCACGTCGCGTCGCAGCATTATCGATGCTCGCACTGCGGCGAAGCATTTGCGAGACAAAGGCATGTTGCAGATCACGTCAGGAAGGTCCATGCGATGGAAGAAGATCCGTACATTGCAGGAGACCAAGTCACAGGAAACATGGAGTTGAAACAGGAACCAGTGACCATTAAGGAAGAGAACGAAGAGGAGAACATCGACGTGTCATCGCTAACACCGGTCGCAGATCAGCAGTACGTCGGCTCGCCCCTCGGCGAGCAAGCAGAAACAAATGCTCAAGGCAACGGCAGTCACCCTTCTTCACCGACCGTCTCTCATGCTCAACACGGTGGCAGCGGCAATAACGACGATGCTCAGAGTTCGTCTTCGACGCCACTCCCAGAGAACACAATCCCAGCCTAG
Protein Sequence: MPFRCEFCSRLFKHKRSRDRHIKLHTGDKKYRCTHCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKDQQQQQQNGHNNSNSSRASSNNTPSPGSAIPSFRCLQCGETFRKPEELQGHMITQHNVETGGSPRGLLGGLMLGDSPLTRSPSRPLPFPTPKLACIYCTKDSFNTMEALQLHVQAMHGSILNGDLREFASPSLTPHHLLTSPPSSGNNNHTVTSTAALMPYSCDLCTMRFGTVQGLQKHALAVHGLMGGGGDSGAASPGLFCVQCSLSFPSAALFAEHYMLLHGSASAMPSAPAPEQLKPTDLSKKAAAPHRGPHHDDRSPSAKRHKSSDADVSLQVNQYEHPGTLLCNQCSAALPDFESFRTHLKSHLEEAGGLRGLLGGGGDLMGMLSSPETTRKSPAAAASSGALICPHCGAKFSGADEHQAFEQHITTHFMATATEYGCQSCLKLFPKPDELQKHLMDIHAHHLYRCSLCKEMFDSKVAIQVHFAVKHSNECKLFRCTACTSATAMFRSELDFGLHVRSVHAPVPLLTGAATKAPAQQPFRCLFCRLSFATELEMQFHLAAHSKQFHCPLCQEAFHVEFLLDKHMQTHHSSQVMNSNGASSAENLTQQQKSPKSKSSGVPPSSTALTNSNNSSISSGSTGRNSTNNIENSSGKKGDQANGNCCCDICDRCDFGSEAELVAHRKLVHHIKPSTGKNGAVSLHCAYCSENCKSRTELENHMKTHSQGSSGSGKHKCNICDELCPSAAVLAEHKLTHCKVISGSTCTQCKATLVSEEQFYTHLQQHGANNNNSSSSAQGNANSAHQQVVLPTPCVVCRQTLISDIEVRMHARFHLKNSAALTATEPMYQCCLCLKQFEMQNLIIAGGNNGAVPSIQGATYICKDCYHCHSKSSPPQAQQPLPQTSQQQQFASQEQVFRCSECQVKFENSSALEAHLVSVHRKTYQCIKCQMSFETEREIQMHVATHLLTEGSSHECHLCRRLLATPLKLQAHLIEHTFAGCGSYTCYLCSAVFTAAQGLQQHMLEHGLAARPYDCSRCSLRFFFRAELDNHSYSHSDESNAAMGNPPSLLLDGTDLANKALYYHHLSSNGSYEAANPDMHYYKTLVQESSKQQKHKNSKGHGSKGTAMLKCLECNKEFSSLMGLQAHQRHHKHSSSSSKKVYTCNECGKEFGMARNLSVHMRSHHEDHGGDERSSEDMNLELEEHYQTEGKSGQICPVCRRDFLDVESLESHVASQHYRCSHCGEAFARQRHVADHVRKVHAMEEDPYIAGDQVTGNMELKQEPVTIKEENEEENIDVSSLTPVADQQYVGSPLGEQAETNAQGNGSHPSSPTVSHAQHGGSGNNDDAQSSSSTPLPENTIPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00210145;
90% Identity: iTF_00210145;
80% Identity: iTF_00210145;