Basic Information

Gene Symbol
lilli_1
Assembly
GCA_003018175.1
Location
PYGN01000177.1:616106-964492[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 4.2e-11 1.2e-06 28.8 0.0 4 114 27 133 26 154 0.77
2 8 9.2e-07 0.026 14.4 30.2 343 513 245 460 228 461 0.61
3 8 1 2.8e+04 -13.9 23.6 84 229 509 669 479 686 0.34
4 8 1 2.8e+04 -12.5 27.2 433 494 659 723 645 734 0.65
5 8 1 2.8e+04 -16.8 29.2 99 255 721 872 698 891 0.43
6 8 1 2.8e+04 -15.0 29.6 89 269 800 987 763 994 0.43
7 8 0.016 4.4e+02 0.5 4.8 113 190 1088 1164 1066 1184 0.33
8 8 0.02 5.6e+02 0.1 29.6 94 250 1257 1409 1228 1423 0.52

Sequence Information

Coding Sequence
ATGGAGGgacaccaccaccatcatcaacACCATCGTAGTCATCATGCAGGAGGGCGTCACCATGGCATGGCATTcgtGGAGCGCGACCGTTTACGGGAGCGAGAGAGACAGGCGCGTGCGCAGATGTCATCTCAAGCAGAGCGCGAAGCCGAGGGGGCACCACTCTTCGGGGCTCCCGTCAGGgtCCAGCCCACGCAGGTGACCCGCCAACTCCAGAGCAAGTTGGGCGACTATCAAGTGGTGCAACAGATGTTGGTAGACGACTCGAAGCACTTGATAGGAATTGACGGCGTCCCCGCAAGCCCAGCACCTGGAGGAGGAAGTCACCCTTTCTTCCCGCCTGCCTCTTCCAGACTCCAGCCATCGGCGGAGTTCAAGAAACCCTCTACGCATCATAGTTCGGGGAACAACGGAAAAGTTAATAATCACTATCCACCTCATCCTCCTCATACCCGCGGTGGCTTCGTTAAACCAGCTGATGGGAAACCACCACACGGGGGCAGAGGAGGATTCCCTGGACAACCTGTGAAGCACGGAAGTGGCAGTAACAACGACCGGTCCAATGGTGGAATTGTACCACCGAAAGGACCACCTCAAGGCGGGGGTGGCGGAgggggtggtggtggtggtggcggCGGAAATAGCAGGGTTCATAATGCAGCAAGAAATCTCCCAAGAATTAATGTTAATCAGCTCCCTGGTCCAGGCCAGAAAGACTCATCTCAGCTGGGCAGTGCAGGTCAAAATGAAGTAGAAAGTATTCTTAAGGAAATGGTGATGGAGATGACCCCTATCAATATTGCAGGCATTGCGACACCGAGGAAGGAGTTGGAATCAAAATTTACCTTCAATCCCTTTCCCCCTAAGGTACCAGAACACCCAGCTCCCCGACAACCGGATTATACGAGTAGAAATCaaCGCAATACCATCCAACCGCCTCCGCCGCAGGTCCCAACGTGGGTTGACGACCTATCTATTTCTAGTGAAGATGAAGACGACAATAAGGAAGTGCAGAAACCTGTGGGTACTAGACTCAGTGGACCATCGGATAAATTGGAAGAATCaagATTGAGTGCTAGTCCTACACCTAGCGCCTTTGGGGCTATTGGCAGTAGACCTCCAGAGCCGTTGGCACCAATGTCCCCAGTGGTCCCTTCTCAGTCTCCAGGGGCCTGCAGCTCATCTACAGATTTGGATTCAGAAAGTGGGTCTGCATCAGATAGCGAAACAAGTAGCGAGGAATCAGGGGATGAGGCTCCTAATGAACCTGTGGAATCTACAGGGAGCAACACCGCTCCACAGTCTCACCTATCTCCACTGCCTTTGGAACCAATGGAAGAGCCTAAGCCACAAGACAGGTGGAATTTGCGGAGATTTCTGCAAACGGAAACGCAGCCACCTGGAGCAGAACAACAGGGAGAAAATGATTCTTCTAAACTTGGCAAGTCTGAATCGTCGCCAGTGACGACATCGGCAGTTCCTACCCATTTATCAGATCCAAGCATTCAGCAGCTGTCAAATGGGGCCAAAGGAAAAGTTGAAAGTGGTGCAGTTTCAGATGGAAGTGATTCAATtaaagaatttgaaaatgttGTCGAGGATCTGCAGCATCCTCCTCCATTAGTATCTAGTTTCTCTGATTCAGAGTCAGATGCGGAAGACAGCACAAAGAAGAAACAGCCTGTCGTCGAACAGAGAGTTAGAAGAAAGCGCCCAACTCTACCTACTCGACAACCGGAGCTGTCCGATAGCGAAAGTGAGGATAGCGATGATGGGATTAGGGAAAAAGGCAGACTTGCGAAAAGAAACGCAACTCGTTCCAAAACCAGTTCAAGATCTCAAAATTCATCTGATGAAGAACCAACAGTGGAACCCCCAAAGCCTCAAATAGTAAAACAACAAAATGGTGGTAATAGTGCAAGATCTAAACCTTCTCTGTCTCCGTCTCCTGCTCGGTCAGTGGGGGATGGTAAGAAAAGGAAGAGGAAAGGTGAAAGGACTCCAAAGCAAACCCCTAGTAGAACTAGTGAAGTTGTGAAGAAACCTACAtcgtcttcttcatcatcatcttcgtcGTCATCTTCTGATGAAGATGAAAGACCGCAGCCAAAACATGCACGGTCTTCTTCAAGTTCATCAGAAGGTGAAATAAAAGACCCCAAACCTATAAGCAATTCAGCTAATAATGTAAGGTCTAAACAAGTGGCATCCAATCACAGTGACTCCGATGATTCAGACGTTGGGAGTAAAGTGAAAAGAAGACCCAGAATTTCTGCTAAACCAACAGTTACCCAGAATCGATCTGAAGACGAATTGCCAAGTATTAAACCAAATAATCGACGTAGGAATAGTAGAGATAAATTTGGCAAGAAAGGTAAAGTAGTTTTAAGTGAGTCTGATGATGATAGTGCACCAGAAAAGGGAAAGAACTTCACTAAAGCCAAACCAAAAGCAGTCTCCCCTCCAGTGCGCAGCGAGTCTGAAGAAAGGGAAGAATGGACAAAGACGAGTACTAAGACTCAAAACAGTGCAAAGAAACCAGGTAGAGGAAGAAGTAAGGCTAAAACTGGTGATAAAAATAACAGTATGACTGTTCAGGAAGAAAAGAAAGCTCTTGCCACAAAGGAAAAGAAAGTTCCAAAGGCTTCTAACAAGAAGCGAACTAAGGAAGAAGGTGGAACTGGCCCAAAGAAACAATCTGGACCTGGAAGGCCTCCTGGTGGTGGTTTTCGAAAgcataaattaaagataataaaaagtGAACCTCTCTGTCCAAACACATCTTCAGATAGTGAATCTGAAACAGTTACTTCTGCTAAACCTCCTCTAAATAAAAACCAGCGAGCAGCAAGTCCTGATTCTAGTTCTGATTCAGATAAAGGCAAACCTGAAGCGATAAAGAGGAAAGTGTCTTCAGATAGCGATAACAGCGAAGGATCGCCAGTTGTAACGCGCCCTCCGGTTTCAAAAATTGAAGAGAGTCCTCCTAAACTGGACACCGAAGGTAAAGTCCCTCAAGACAAGAAGAAAAGTGACACCTTGAGGAAACTTTTTGTTCCAACAAAGGGTGGTGCCAAAGGAGGTGGTAAAGGTGGTGCTAAAGGGGGTGCTAAAGGAGGGATATACTGTGCCAATGGGGGTGGGAAGGGGAAAGGTGTTGGGGCTAAGGGTAAAGGAGGATCGAAGACGCCCGGTGTTATAGTGGTGGATTGTGAATCTGAAAGGACGTCTTATCCAGAAGATGAGAATATGCCAAGACAAGTAAGTCCTCCTGTACCATCACCAATACCAAATGATGATTCCTCGAGTAAACTCGCTACTGTTAATTTTGAGTTAACGTCGAGTTCAAGCAAGGCTGAAAAAAGTGGTGCCACCCCTGGAAAGGCGAGTACTAGGGGACACAATTCTGATAAACCTTCACGAAGAAGATCTTCAAAGAAGGATTTGCAGAAATCCTCTAAACAGTCTGCAACTGCAGAAGCTGCACACGATGCTAATATGAATAAGAAAAATGCATCGGATATCCCTCAAGTGGACCTTCCTCCACTTGTGTATCGTGACGACGGATTTCCAAGTCTCATATGTCGTTTGGATCTATCAAGACTCTCGCAGATCCCCGTTTCTGGGGGTCCTGGTAAGAGGCCTAGTGGGGGGGAAGATATCAGGGTAAGGACAGAGCTGGCAGATACTAGGCAAGCGTGTGGAAGTGAAATAGAACATTCTAGTAAGGGTAAAAAGCAGCGGACTCAGTCGCCTACTTGTGAATCTCCTGAAGAAGGAGAGATAGTGATACCAAAGTGTGATAAGAAGAACTCGGATGAAGTGCTGGGTGAAAATGGTTGTGACAGTGTGACACGTAATCGTAGTGCTTCTAAAAAGCAGAAGAAGAGGAAAAGCAATAGAAGCAGGGAAGACTCCAGCTCTGTGAACCAGTCGGAAGTCAAAGATGGTACTCAAACTGAAGGGAATGAAAAATCTACCAGCAAATCATCCTCTAAACATCACAAAAAGAACAATGGTGGTGGGCATAAACGAGAACGCAGGCCCAGCGGTAGCTCTGTCTCATCTTTATCAACGGAATGCAGTAGAGTATCTTCTCAAGGCGGCAGCAACCATAGACATAAAGAAAGGCGTAGTCGTGACCATGGTACCAGTAAAAGACGTAAACTACATCAGCACACAGAAGAATCCAATGATCCTGCCACAAAATTATCTAGTCAAAGCACAGTTGCACTCACAGACATGCCTCCAACAAACCATGAACGAGAAGAAAATGGTGAAGAGATAGCAACTGCAGGTGGGGGAGAGTCACCTAGCTGTTCAGACCTACATTATCCTCCTGAACTTGCTGGAGTAAGCCAGCCAGGCTACTCACTACCTCCTGGTCATCCATATCCTGTACAAGACATGAACTGGCAACCTAAAGTATACATCTCATATTTTGAAAGAGGAGAGGATGATGAAGCTTCAGACGACGAGGACAGAGATCAGAATCAGTACCTTACTGAGGCAAAGAGATTGAAGCATGGAGCTGATACGGAAACAGACCACACAGCTCAAGGACTGCAGTACCTGGAAGCTGTGTTATTCTTTCTTCTCACTGGCAATGCCATGGAGCATGAGAGCGTGACAGAAAAAGCGGCTTTTACTATGTATAAGGACACTTTAAGTCTCATCAAGATTGGGTATGAATCAATTCAAAATTTCATTGAATTGCCTAAAATTCAAAGTGGCGGTGTATTTGAAGAAGAGACAGGTGTACATCAAGATGTAACAAACGTCAACAGGTACATTTCTTCAAAGTTTCGTAGTCAGCAGAACAATTCTCCACAAGGCAGCATAGACAACAAATTAGCGGTTTTAAGTTTAAGATGCCAGTCATTGTTGTAtctgaaattattcaaaatgcGGAAGCATGAAGTGAAGGAGTATCAGAAAGTTTTGGCAGACTATCATCAGAAGACTACTCAGCCTACACCGTTGCAGCCTGAACAATGTGGAGGCCAAGGtactccatcaccattatcaccAACACCCTCGCCAGCCGGGTCTGTGGGATCTGTTGGCAGCCAGTCATCTGGATATAGCAGTGGTGAACTGGCTGGAAGAACGGTGGGAAATGGTGTAGGCGGTGTCAGTGGCGTAGGGCAGCAGCCTCCAGCAGCCAACATGGGACCATGTGTTGCCGTGCCTCTGTCAGTGCATTCTGCAATGCAGAAACAGAACCAGCACTTCAGCTACCTTCTTTCATGCCATGAGTTATGGGAGCAAGCGGATGCACTTGTCTACAAGGGCAAACACAGAGatTTCTTCATTGAACTGGACCATTATTGCGGGCCTCTGACGATGCATAGTTCTCTAAATGACCTAGTGAGATACGTGAGAATTGGCATACAGAGGTTGAAGAAAATGTTCGACGAAGTGAGTTTGTGTGTTCCCATGAAGACACAGGAGTTCAAATAA
Protein Sequence
MEGHHHHHQHHRSHHAGGRHHGMAFVERDRLRERERQARAQMSSQAEREAEGAPLFGAPVRVQPTQVTRQLQSKLGDYQVVQQMLVDDSKHLIGIDGVPASPAPGGGSHPFFPPASSRLQPSAEFKKPSTHHSSGNNGKVNNHYPPHPPHTRGGFVKPADGKPPHGGRGGFPGQPVKHGSGSNNDRSNGGIVPPKGPPQGGGGGGGGGGGGGGNSRVHNAARNLPRINVNQLPGPGQKDSSQLGSAGQNEVESILKEMVMEMTPINIAGIATPRKELESKFTFNPFPPKVPEHPAPRQPDYTSRNQRNTIQPPPPQVPTWVDDLSISSEDEDDNKEVQKPVGTRLSGPSDKLEESRLSASPTPSAFGAIGSRPPEPLAPMSPVVPSQSPGACSSSTDLDSESGSASDSETSSEESGDEAPNEPVESTGSNTAPQSHLSPLPLEPMEEPKPQDRWNLRRFLQTETQPPGAEQQGENDSSKLGKSESSPVTTSAVPTHLSDPSIQQLSNGAKGKVESGAVSDGSDSIKEFENVVEDLQHPPPLVSSFSDSESDAEDSTKKKQPVVEQRVRRKRPTLPTRQPELSDSESEDSDDGIREKGRLAKRNATRSKTSSRSQNSSDEEPTVEPPKPQIVKQQNGGNSARSKPSLSPSPARSVGDGKKRKRKGERTPKQTPSRTSEVVKKPTSSSSSSSSSSSSDEDERPQPKHARSSSSSSEGEIKDPKPISNSANNVRSKQVASNHSDSDDSDVGSKVKRRPRISAKPTVTQNRSEDELPSIKPNNRRRNSRDKFGKKGKVVLSESDDDSAPEKGKNFTKAKPKAVSPPVRSESEEREEWTKTSTKTQNSAKKPGRGRSKAKTGDKNNSMTVQEEKKALATKEKKVPKASNKKRTKEEGGTGPKKQSGPGRPPGGGFRKHKLKIIKSEPLCPNTSSDSESETVTSAKPPLNKNQRAASPDSSSDSDKGKPEAIKRKVSSDSDNSEGSPVVTRPPVSKIEESPPKLDTEGKVPQDKKKSDTLRKLFVPTKGGAKGGGKGGAKGGAKGGIYCANGGGKGKGVGAKGKGGSKTPGVIVVDCESERTSYPEDENMPRQVSPPVPSPIPNDDSSSKLATVNFELTSSSSKAEKSGATPGKASTRGHNSDKPSRRRSSKKDLQKSSKQSATAEAAHDANMNKKNASDIPQVDLPPLVYRDDGFPSLICRLDLSRLSQIPVSGGPGKRPSGGEDIRVRTELADTRQACGSEIEHSSKGKKQRTQSPTCESPEEGEIVIPKCDKKNSDEVLGENGCDSVTRNRSASKKQKKRKSNRSREDSSSVNQSEVKDGTQTEGNEKSTSKSSSKHHKKNNGGGHKRERRPSGSSVSSLSTECSRVSSQGGSNHRHKERRSRDHGTSKRRKLHQHTEESNDPATKLSSQSTVALTDMPPTNHEREENGEEIATAGGGESPSCSDLHYPPELAGVSQPGYSLPPGHPYPVQDMNWQPKVYISYFERGEDDEASDDEDRDQNQYLTEAKRLKHGADTETDHTAQGLQYLEAVLFFLLTGNAMEHESVTEKAAFTMYKDTLSLIKIGYESIQNFIELPKIQSGGVFEEETGVHQDVTNVNRYISSKFRSQQNNSPQGSIDNKLAVLSLRCQSLLYLKLFKMRKHEVKEYQKVLADYHQKTTQPTPLQPEQCGGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELAGRTVGNGVGGVSGVGQQPPAANMGPCVAVPLSVHSAMQKQNQHFSYLLSCHELWEQADALVYKGKHRDFFIELDHYCGPLTMHSSLNDLVRYVRIGIQRLKKMFDEVSLCVPMKTQEFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-