Bger025653.1
Basic Information
- Insect
- Blattella germanica
- Gene Symbol
- bab2
- Assembly
- GCA_003018175.1
- Location
- PYGN01001337.1:13745-77768[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-11 8.9e-09 35.5 0.0 1 38 422 460 422 465 0.90 2 4 1.7e-12 1.4e-09 38.2 0.1 1 39 476 514 476 517 0.95 3 4 7.9e-18 6.4e-15 55.2 0.0 1 45 531 576 531 576 0.97 4 4 2.4e-19 1.9e-16 60.1 0.1 1 43 583 626 583 627 0.97
Sequence Information
- Coding Sequence
- ATGGCAGGCCAACACTATTGTTTACGTTGGAATAACTATCAATCCAATATGACATCTGTGTTTCATCAACTTCTGCGTAATGAAGCCTTTGTAGATGTGACTTTGGCTTGTAATGATTCTTCATTGAAAGCACATAAGGTTGTGTTGTCTGCATGCTCGTCATATTTTCAGAAGCTTCTTCTTGAAAACCCTTGTAAACATCCAACAATTATCATGCCACAAGATGTGTGTTTTAGCGACctgaaatttataattgaatttgtATACCGAGGAGAAATTGATGTGTCTCAAGCAGAATTACAATCACTTCTCAAAACAGCAGATCAACTTAAAATAAAAGGATTATGCGAAGTCCCTGAAGGAAGAGATAGTGGTGGTAATTGTGGAGCTGCAGAAGTAACACCTCTACCTATCCTTTCAAGGCGCTCATTCACTAAGTTGCGCCGATTGTCTGGTTCAAAACGTCAGAGGGGTCCAGAAATGGTAAGAAGAGCCATCTTCAAAGAATGtgatcataatcatcatcttcaaCAACAGTTGCAGCCCCAATCACAAGGTCTTACGGGAGTGACCACTCCCACTGGTACATCAGTGCTAGATCTTGGTGTATCAGAACTCTCCCGTTCTGCAGATAATCGTGTTCCTGAATGTGTTACTGTGGCCACTTCTACTGAAGATGATAATCCAGAAGTCCCAGTTGTTGTATTAGAAAGCAAAGTGCCCCAGCATCAGGTGTTATGTGTTTCATGGCAGCTGGGGAATGGGGCCGTGCCGACAGCGGGGGTGATGGCGCCCCATGGGGGGCTTACACAACCACCACAGATTGTAATGGAAGGGACAAGTCACAGCTCCAGCAATGCAACAGATGTGGACATCCCCCCAGAGGCCCAGCCCCCCGCTCCGGCAGCCACTCTAGTTGAAGACATGGACATGAATGAATGCTCTACACATGATCGGAACAGAGATTTAACAGATAATTCTGAGGGTACAAGGGATGATGGAGAAAATGTGAAAGTCAAGTTTGAGACATTGCGGGCAATGGAGCAGGGAGAAACGATAGATATTGACAGCCATATGTCAGATAGAAGTCCTACCTACCAGAACCTTAATGGTGCTGCTCTATTGCAGCAAAATGTGGGCGAGGATGAACATACAATGCATACTATGATGATCACACCAGAACTTCTAGGGCTCATTCCTTCTTCATCGGGCCATTCTGATGTTGGTAGTGAAACTGGTAAAAGTGGTGGTCCTAAAACATGGACACAGGAGGATATGGAACTAGCTTTGGATGCGCTTAGAAATCACAACATGAGTTTAACAAAGGCATCTGCTACATATGGTATACCATCAACAACACTATGGCAACGAGCTCATCGCATGGGCATTGACACACCAAAAAAAGAAGGCCCTACAAAATCATGGACTGAAGAAAATCTGAATAATGCCCTGGAAGCCTTGAGAACTGGTACAATATCTGCCAACAAAGCAAGTAAAGCTTTTGGTATACCAAGTAGCACTCTGTACAAAATAGCTCGGAGAGAAGGCATCCGCTTGGCTGCACCTTTTAATGCTGCGCCTACAACGTGGAGTCCTGATGATTTGGAACGTGCTTTAGAATCTATTCGTTCAGGTGCCACTTCAGTTCAGAGAGCTTCGACAGAATTTGGAATTCCAACAGGTACATTATATGGTCGATGCAAAAGGGAGGGTATTGAATTGTCACGATCAAATCCTACACCTTGGTCGGAAGATGCTATGGGTGAAGCTCTTGAAGCTGTTAGGGTTGGACAAATGAGCATTAATCAAGCAGCCATCCATTACAATTTGCCATATTCGTCTCTCTATGGTCGATTCAAGCGAGGTAAGTATGAAGCAGAAGGTCATCATCCAGATGATGGACCTTCCCCGCCCCCTCCTCCTCCGCCACAAGTTATGGTTGTTCCATACCAACAGCCACCTCCACAGCAGCAGCAACCACAACAACAGCCACCGCCTCCACCTCACAATCAACACCACCCTCAGCAACCTCCTCAACAACACCATTCTCCGCAACAGCCTCAACATCCCATGTATCAACAACATAGCAACAGTTGA
- Protein Sequence
- MAGQHYCLRWNNYQSNMTSVFHQLLRNEAFVDVTLACNDSSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCFSDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPEGRDSGGNCGAAEVTPLPILSRRSFTKLRRLSGSKRQRGPEMVRRAIFKECDHNHHLQQQLQPQSQGLTGVTTPTGTSVLDLGVSELSRSADNRVPECVTVATSTEDDNPEVPVVVLESKVPQHQVLCVSWQLGNGAVPTAGVMAPHGGLTQPPQIVMEGTSHSSSNATDVDIPPEAQPPAPAATLVEDMDMNECSTHDRNRDLTDNSEGTRDDGENVKVKFETLRAMEQGETIDIDSHMSDRSPTYQNLNGAALLQQNVGEDEHTMHTMMITPELLGLIPSSSGHSDVGSETGKSGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRMGIDTPKKEGPTKSWTEENLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSPDDLERALESIRSGATSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYEAEGHHPDDGPSPPPPPPPQVMVVPYQQPPPQQQQPQQQPPPPPHNQHHPQQPPQQHHSPQQPQHPMYQQHSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00209930; iTF_00396415; iTF_00396211;
- 90% Identity
- iTF_00209930; iTF_00396415; iTF_00396211;
- 80% Identity
- iTF_00209930;