Basic Information

Insect: Blastobasis lacticolella
Gene Symbol: -
Assembly: GCA_905147135.1
Location: LR990043.1:8471337-8476505[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.18 16 7.2 3.4 2 22 192 212 191 212 0.95

2 16 3.4 3.1e+02 3.1 1.0 1 23 310 332 310 332 0.82

3 16 0.59 54 5.5 0.3 2 23 467 488 466 488 0.96

4 16 0.053 4.8 8.9 1.3 2 23 568 589 567 589 0.96

5 16 0.045 4.1 9.1 2.5 1 23 597 619 597 619 0.98

6 16 0.12 11 7.7 3.4 1 23 656 678 656 678 0.95

7 16 0.00024 0.022 16.2 4.0 1 23 686 708 686 708 0.99

8 16 0.1 9.6 7.9 1.9 1 23 792 814 792 814 0.99

9 16 2.1 1.9e+02 3.8 3.5 1 19 869 887 869 891 0.92

10 16 0.22 20 6.9 0.3 2 23 898 919 898 919 0.96

11 16 0.0014 0.13 13.8 2.7 1 23 984 1006 984 1006 0.97

12 16 0.009 0.83 11.3 1.1 1 23 1012 1034 1012 1034 0.96

13 16 0.0067 0.61 11.7 2.6 1 23 1122 1144 1122 1144 0.97

14 16 0.00017 0.015 16.7 1.4 1 23 1150 1172 1150 1172 0.99

15 16 2.4 2.2e+02 3.6 1.6 1 23 1262 1284 1262 1284 0.95

16 16 0.038 3.5 9.3 1.9 2 23 1296 1317 1295 1317 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.18	16	7.2	3.4	2	22	192	212	191	212	0.95
2	16	3.4	3.1e+02	3.1	1.0	1	23	310	332	310	332	0.82
3	16	0.59	54	5.5	0.3	2	23	467	488	466	488	0.96
4	16	0.053	4.8	8.9	1.3	2	23	568	589	567	589	0.96
5	16	0.045	4.1	9.1	2.5	1	23	597	619	597	619	0.98
6	16	0.12	11	7.7	3.4	1	23	656	678	656	678	0.95
7	16	0.00024	0.022	16.2	4.0	1	23	686	708	686	708	0.99
8	16	0.1	9.6	7.9	1.9	1	23	792	814	792	814	0.99
9	16	2.1	1.9e+02	3.8	3.5	1	19	869	887	869	891	0.92
10	16	0.22	20	6.9	0.3	2	23	898	919	898	919	0.96
11	16	0.0014	0.13	13.8	2.7	1	23	984	1006	984	1006	0.97
12	16	0.009	0.83	11.3	1.1	1	23	1012	1034	1012	1034	0.96
13	16	0.0067	0.61	11.7	2.6	1	23	1122	1144	1122	1144	0.97
14	16	0.00017	0.015	16.7	1.4	1	23	1150	1172	1150	1172	0.99
15	16	2.4	2.2e+02	3.6	1.6	1	23	1262	1284	1262	1284	0.95
16	16	0.038	3.5	9.3	1.9	2	23	1296	1317	1295	1317	0.98

Sequence Information

Coding Sequence: ATGGGCTTGCAGTACGCAGATACAGAGATGCTTACCTGTACCAGCGACTCTAACGATACATCGGCGTCGGACGTCGCTGCCAAGAAAGACGACTTGGCACCAGACACGAGCAGTCGTCAGTCCCCCACGGCGGCGCTCGACGATGGAAAGTCACAAAAACAAGCAAGAAAAATACCCAGACCACCGCCGCCTCTGATACCATTATGTGCCTCAACCCCCACTCAGAACAAACAGTCAGGAGAACCCCCACACAAAAAGTTTAAGGAGACACCATCAGAGGCCACGCCAGATACAATTTCCACTAAGAAATTCGAAAATTTACCAGACATATCGCTAATACCGGTGCATAATGTGACGTCAAAAGAGCCAGTCGTACGTAAGAAAAATGAATCTTTCTTCGATAAATTAAAAGAGCGAATCCTCACAGAAACTGGAGCAGAGGGTTCACTGAAATGCAAAATCTGTGGTTTCGAAAGCAAATGCCTATCAGAGCACTCTGTCCATGAAAAAAATTGCTCACCACTGACGAGTCGACTGCCCTCAAACACTTCCATTCCGAGTCTGGGGTCGACGAGATGCCAGAACTGTAGGCACAGGTGCAAATCTAGCGCAGATCTGTACGTCCACATGCAGACGTGCAAGAAAAACGAAACAGTGCCAGATAAACCACCCGCAAATGTGAAAGTAGATAATGAAAATGTTGCCTCGTCAAGTCATGAAAAAGAGGCCGAGCCCCATCCAATGGAGAATGTCGTATTCGTTTGGAATAATTTAAATCCAGATATGAATAACTTTGAAATGCCTCTGGATATTAGTATCAATGACGACTCCACACTGCCAGACTATCAGAGAAGTTATGACTCGGAGATCATTGACGATAACGATGGCATGAATTTGTCTCCAAGCCAAGCTGCAGGAAAGAAAGTATTTAAATGTCCCCACTGTCCGTTTTGGGCATCAACAGCTTCACGATTCCATGTCCATATAGTtggacatttaaataaaaaaccattCGAATGTTCGTTGTGCAAATACAAGTCGAATTGGCGATGGGATATTACTAAACATATAAAACTAAAGTCAGCAAGAGACCCCGAACATAACGAAGCTAAAGTTTTAATGACAGATGAAACAGGCAGGAGAAATTAcagtaaatataacaaatttttGGCAATGCCAATTATGAACGAAAATGGAGAGAATGAATTTCATTATATTGACCCTAATACGGCCGTTGATGCAGCCATGGAGATTGATGAGTCAATAAATGAAGGCAGCGACGCAAATAGTGTATATGAGGTTCAGCCACTAGACCTGCAAACGCAGTATGACGACATCAAGTTTGATgacttagaaaataaaaatgaggaCTCCAAAAAGCCAAAGAAGACTCTTTGGAAATGCAAGAAATGTAATTACAAGGACCCATCAAAAGAAGCCTTATTGGAACATGTGCGCGAGCATTCTAAAACTGAAGGTAACAATGATGATGACAAGAAAAAGCAAGAGAGCACACCAGACCCGGCAGACTTAGCCTACCGCTGTGGACATTGTAACCAGCTCTCCAATTGGAAACATGTGATACAGCGCCACTGCCGGTTGAAACACGATGgcattataaaagttataaCTACAGTGAAAACTAAGGAGATGGCGCCAGGTCCTAATGCCATAATGTTGGCTGTGAACGATATGACCGACAGCTGTTCCAAATGTCCTTTCAAGACGAATGACAAGAAATCAATGTACGCGCACATGCAACAGCATCAGCCGTCACCGCAGTCTATATTTAAGTGCTACTTCTGTCCATACTTCGTAAAAGATGAACACGAATTATTGCAGCATCTCAAACTACACGGCGTCAACGACCCTGAAGATTACCTCGCTAAAGTGGCCGGCAAGACGCCAGAGTTCCACCCACAAGCAGCTGTAGCATCTACATCCAGCTCTGTTCCAACAAAAAGACACAAATGCACCGAGTGTCCGTATGAAACGAATAGTAAATCGCAGTACATGTACCATGAACAGTTCCATCGTCTTCCTGCTGACACGCCGTACAAATGCCCCGAATGCAATTACAGCGTCTCGAAACGACACCTCCTCCATCAGCATCTGCGGGTACACGGGATATTCACAAATAAAATCGACAAGGAGACAGAAGACGCTTCAACATCGCACGCTGCAAAAGTGGAAGCCAAAGAGGAATACCCAGCATTACTTGACGAAGTACCATTTGTGTGGGTGTCTGCAAAGAATGAATTCCACAAAATGTATAAATGCCGTTATTGTTCTTATGTCAACTCGCAAAAGTGTAAAATACCCAACCATGAAAAAATCCACTGTTTCGTATTTGAAAAAAGTGAACTAGCCGTTTATAAGTGCTTGGAATGTAAATTTACGTGTGACAATGCGGGCCGGTTAGCGGAGCACTCCAAGACCCACGGCGAAATATACGGGCGCATATACTGCCCTGTAGAGGAGGACGTGCCTGACGAGGAACAAATAGCCAAGTTACGCAAAGTGATTGAAAGTGAAAAAGCTAATGCCGTCGAAGAATTACCCAAGGAAGGAGGAGCCCAAGAAACTAaagaaataaaagttttatatttttgtcagAAATGTCCAGCAACATTTTTCTCTGACAATGAACTTCGACATCATGATAAATTCCACGACTTATTATTTGACCGTAAATGTAAAAGTTGTGAATTTTCAGTACCCGATTATAATGAGCTTAAAGcacatattttttatcattcagATGAGTATCATACAAAAACTAAGATGCTTAAATTTATGCACAGTTCACATCCAGGGCACAAAGAACCTCGATTGGAACTAGTTCATTGCACTACTACTTCTGAAATTACTTGGGTAGTTTCTAGCCCTGGTAAAAACTTTGATGATGTGTATAAGCGGCCAAACGACTTCAAACATACACCTAAACAATATTGTTGTAAAGAATGTCCTGCTaagtttttcaaaaattcaGCTCTCACTACGCATATGACTCTACATGGTGGAGACGGAGACCACAAATGTAAGAAATGTAGCTATGCCGTCAAAAATGTAGGTAACCTGGCAAAACACGAAATGTTACATGAAACTGAAAATAAATCGTGTGATTATGAATCAGGAGACGATATGGACTTTAAAATTATTCCATTATCTGGAACTGATCTATTCCAAAGAAAGACTGAAGCTCAAAAACGTGTATTGAGTGACAAAGACAAATTGGTTAAGCCGAACGATCACTTTCCGCCTGTACTACAGGCTGACCCGCAATTTGGTTACTTGATGCACGGTAATCCCGAATTCATATATCCTACTTACCTAAAGAATGGTCGCCAAAAGGAAAAACGATATAAGTGCCATAAATGTCCatcggcttttgaaaagcgagaGCAGTACAAAATTCATTTATCTTTACATGGCTCTAAACAGAGATATAAGTGCGAACTGTGCGATTACTCTGTAAAGTACTATGCTAACTATGTTCAGCACATGAGGAAACATCAAATGAACGACGACGCCCAAGCTGAACGGCAGAAAGGAAGTCCGGATTTCCCTTTGATGGAAACTCAAGAAGAGAAACACGAGGAAAGTAGTGATCATATAAAATTAGCTATTAAAACCATGCCTAAAGGAACAGCAAAAAGCGATTTCCAACAATTTTCGATAAGTGATCAGCAGACTTTACGTTTACTGCAGCGTAGACGATCACAAACATCTGGAAAAGAAACGAATGCATCAGAACAGTCTGCAAGTAAAGACCGTAAAATGCACATGTGCCTCCTTTGCCCGTACACGAACCAACGGTTAGATGCATTGAGCAATCACTACAGGAGACACGAAGAGGCGGATTCGCTCACTAATCTGAGCAATAAATGCTCCTTCTGTGACCTCATAGTGGTCCAGTCTCACTTTTTGCGTGAGCATCTAAAGACTCATTTTAGCTATCAGAAATCTCTCACACCCGAATGCTATGTGGCCAATGAAGAGGTAACATTTACAATTACCGATGTGGATGAAGATACCGGGTGCACTGATCTCAAATTGGACACCATCGATGATTACATGtgcaatgaaaataaaatatatgtaaaaataagaaCTGGAGAACCAGTGGTGGAATAG
Protein Sequence: MGLQYADTEMLTCTSDSNDTSASDVAAKKDDLAPDTSSRQSPTAALDDGKSQKQARKIPRPPPPLIPLCASTPTQNKQSGEPPHKKFKETPSEATPDTISTKKFENLPDISLIPVHNVTSKEPVVRKKNESFFDKLKERILTETGAEGSLKCKICGFESKCLSEHSVHEKNCSPLTSRLPSNTSIPSLGSTRCQNCRHRCKSSADLYVHMQTCKKNETVPDKPPANVKVDNENVASSSHEKEAEPHPMENVVFVWNNLNPDMNNFEMPLDISINDDSTLPDYQRSYDSEIIDDNDGMNLSPSQAAGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPIMNENGENEFHYIDPNTAVDAAMEIDESINEGSDANSVYEVQPLDLQTQYDDIKFDDLENKNEDSKKPKKTLWKCKKCNYKDPSKEALLEHVREHSKTEGNNDDDKKKQESTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKTKEMAPGPNAIMLAVNDMTDSCSKCPFKTNDKKSMYAHMQQHQPSPQSIFKCYFCPYFVKDEHELLQHLKLHGVNDPEDYLAKVAGKTPEFHPQAAVASTSSSVPTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIFTNKIDKETEDASTSHAAKVEAKEEYPALLDEVPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCFVFEKSELAVYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEEDVPDEEQIAKLRKVIESEKANAVEELPKEGGAQETKEIKVLYFCQKCPATFFSDNELRHHDKFHDLLFDRKCKSCEFSVPDYNELKAHIFYHSDEYHTKTKMLKFMHSSHPGHKEPRLELVHCTTTSEITWVVSSPGKNFDDVYKRPNDFKHTPKQYCCKECPAKFFKNSALTTHMTLHGGDGDHKCKKCSYAVKNVGNLAKHEMLHETENKSCDYESGDDMDFKIIPLSGTDLFQRKTEAQKRVLSDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDDAQAERQKGSPDFPLMETQEEKHEESSDHIKLAIKTMPKGTAKSDFQQFSISDQQTLRLLQRRRSQTSGKETNASEQSASKDRKMHMCLLCPYTNQRLDALSNHYRRHEEADSLTNLSNKCSFCDLIVVQSHFLREHLKTHFSYQKSLTPECYVANEEVTFTITDVDEDTGCTDLKLDTIDDYMCNENKIYVKIRTGEPVVE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00208424;
90% Identity: iTF_00208424;
80% Identity: -