Badu021405.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Blastobasis adustella
Gene Symbol
-
Assembly
GCA_907269095.1
Location
OU026116.1:14050220-14055584[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.15 14 7.2 3.8 2 22 192 212 191 212 0.96
2 16 2.9 2.8e+02 3.2 1.0 1 23 309 331 309 331 0.82
3 16 0.51 48 5.6 0.3 2 23 466 487 465 487 0.96
4 16 0.042 3.9 9.0 1.3 2 23 567 588 566 588 0.96
5 16 0.038 3.6 9.1 2.5 1 23 596 618 596 618 0.98
6 16 0.1 9.9 7.7 3.4 1 23 655 677 655 677 0.95
7 16 0.00021 0.019 16.2 4.0 1 23 685 707 685 707 0.99
8 16 0.089 8.5 7.9 1.9 1 23 791 813 791 813 0.99
9 16 1.8 1.7e+02 3.8 3.5 1 19 868 886 868 890 0.92
10 16 0.15 15 7.2 0.2 2 23 897 918 897 918 0.96
11 16 0.0012 0.11 13.8 2.0 1 23 983 1005 983 1005 0.96
12 16 0.0077 0.73 11.3 1.1 1 23 1011 1033 1011 1033 0.96
13 16 0.0057 0.54 11.7 2.6 1 23 1121 1143 1121 1143 0.97
14 16 0.00014 0.014 16.7 1.4 1 23 1149 1171 1149 1171 0.99
15 16 2 1.9e+02 3.7 1.6 1 23 1261 1283 1261 1283 0.95
16 16 0.033 3.1 9.3 1.9 2 23 1295 1316 1294 1316 0.98

Sequence Information

Coding Sequence
ATGGGCTTGCAGTACGTAGATAGAGAGATGCTTAACTGTAACAGCGACTCTAACGATACATCGGCGTCGGACGTCGCTGCCAAGAAAGACGACTTGGCACAAGATACGAGCAGTCGTCAGTCCCCCACGGCGGCGCTCGACGATGGAAAGTCACAAAAACAAGCAAGAAAAATACCCAGACCCCCACCGCCTCTGATACCAATTTGTGCTTCAACCCCCACTCAGAATAAACAGTCAGGTGAACCCCCACACAAAAAGTTTAAGGAAACACCATCAGAGTCCACGCCAGATACAAATTGCACTAAGAAATTCGAAAATTTACCTGACATATCACTAATACCGGTGCATAATGTACCGTCAAAAGAGCCAGTCGTACGTAAGAAAAATGAATCTTTCTTCGATAAATTAAAAGAGCGAATCCTGACAGAAACTGGAGCAGAGGGCTCACTGAAATGCAAAATCTGTGGTTTCGAAAGCAAATGTCTATCAGAACACTCGGTTCATGAAAAAAATTGCTCACCACTGACGAGTCGATTGCCCTCAAACACTTCCTTGCCGAGTCTGGGGTCGACGAGATGCCAGAATTGTAGGCACAGGTGCAAATCTAGCGCAGATCTATATGTCCACATGAAGACGTGCAAGAAAAAAGAAACAGTGCCAGATCCACCCGCAGATGTGAAAGTAGACAATCAAAATGTTGCTTCGTCAAGTCATGAAAAAGAGGCAGAGCCCCATCCAATGGAAAATGTCGTTTTCGTTTGGAATAATATAAATCCAGATATGAATAACTTCGATATGCCACTGGATATCAGTATCAATGACGACTCCACACTGCCAGACTACCAGAGAAGTTATGACTCGGAGATCATTGACGATAACGATGGCATGAATTTGTCTCCAAGCCAAGCAGCAGGAAAGAAAGTTTTTAAATGTCCTCACTGTCCGTTTTGGGCATCAACGGCTTCACGATTCCATGTCCATATAGTTGGACATTTAAATAAAAAACCATTTGAATGTTCTTTGTGCAAATACAAGTCGAATTGGCGATGGGATATCACTAAACATATTAAACTAAAATCAGCAAGAGACCCCGAACATAACGAAGCTAAAGTTTTAATGACAGACGAAACAGGCAGAAGAAATTACAGTAAATATAACAAGTTTTTGGCAATGCCAATTATGAACGAAAATGGAGAGAATGAATTTCATTATATTGACCCTAATACGGCCGTTGATGCAGCCATGGAGATTGATGAGTCAATAAATGAAGGCAGCGACAATGCAAATAGTGTGTATGAAATTCAGCCACTAGACCTACAAACGTATGACGACATCAAGTTCGATGACTTAGAAAACAGGAATGAGGACTCCAAAAAGCCAAAGAAGACTCTTTGGAAATGCAAGAAATGTAATTACAAGGACCCATCAAAAGAAGCCTTATTGGAACATGTCCGCGAGCATTCCAAAACTGACGGAAACCATGATGATGCCAAGAAAAAGCAAGAGAGCACACCAGACCCGGCAGACTTGGCCTACCGCTGTGGACACTGTAACCAGCTCTCAAATTGGAAACATGTGATACAGCGCCACTGCCGATTGAAACACGACGGCATTATAAAAGTTATAACTACAGTGAAAACCAAGGAGACGATGCCAAGTCCAAGTGCCGTAGTATTGGCTGTGAACGATATGACCGACAGCTGTTCCAAATGTCCTTTCAAGACGAATGACAAGAAATTAATGTTCGCGCACATGCAACAGCATCAGCCGTCACCGCAGTCTATATTCAAGTGCTACTTCTGTCCGTACTTCGTAAAAGATGAGCACGAATTATTGCAGCATCTTAAACTACACGGCATCAACGACCCTGAAGATTACCTCGCTAAAGTGGCCGGCAAGTCGCCACAGCACGACCCACAAGCAGCTGTAGCATCTACATCAAGCTCTGTTCCAACAAAAAGACACAAATGCACCGAGTGTCCATATGAAACGAACAGTAAATCGCAGTACATGTACCATGAACAGTTCCATCGTCTTCCTGCTGACACGCCGTACAAATGCCCCGAATGCAATTACAGCGTCTCGAAACGACACCTCCTCCATCAGCATCTGCGTGTACACGGGATATTCACAAATAAAATCGACAAAGAGATAGAAGATGCTTCAACATCGCACGCTGCAAAAGTGGAAGCCAAAGAGGAATACCCAGCATTACTTGACGAAGTACCATTTGTGTGGGTGTCTGCCAAAAATGAATTCCACAAAATGTATAAATGCCGTTATTGTTCATATGTCAACTCGCAAAAGTGTAAAATACCCAACCATGAAAAAATCCACTGTTTCGTATTTGAAAAAAGTGAACTAGCCGTTTATAAGTGCTTGGAATGTAAATTTACGTGTGACAATGCGGGCCGGTTGGCGGAGCATTCCAAGACCCACGGTGAGATCTACGGGCGGATATACTGCCCTGTAGAGGAGGACGTGCCTGACGAGGAACAAATAGCCAAGTTACGCAAAGTGATTGAAAGTGAAAAAGCTAATGCCGTCGAAGAATTACCCAAGGAAGGAGGAGCGAAAGAAACTAAAGAAATAAGAGTTTTATATTTTTGTCAGAAATGTCCAGCAACATTTTTCTCTGACAATGAACTCCGACATCATGATAAATTCCACGACTTATTATTTGACCGTAAATGTAAAAGTTGTGAATTTTCAGTACCCGATTATAATGAGCTTAAGGCACATATTTATTATCATTCAGATGAGTATCATACAAAAACTAAGATGCTTAAATTTATGCACAGTTCACATCCAGGGCACAAAGAACCTCGGTTAGAACTAGTTCATTGCACTACCACTTCTGAAATTACTTGGGTAGTTTCTAGCCCTGGCAAAAACTTTGATGATGTGTATAAGCGGCCAAACGACTCCAAACATACCCCAAAACAATATTGTTGTAAAGAATGTCCTGCTAAGTTTTTCAAAAGTTCAGCTCTAACTACGCATATGGTTCTACATGGCGGCGAAGGAGAGCACAAATGTAAGAAATGTAGCTATGCCGTCAAAAATGTAGGTAACCTGGCAAAACACGAAATGTTACATGAAATTGAAAATAAATCTTGTGATTATGAATCAGGAGACGATATGGACTTTAAAAATATTCCATTATCTGGAACTGATCTATTCCAAAGAAAGACTGAAGCTCAAAAACGTGTATTGACTGACAAAGACAAATTGGTTAAGCCGAACGATCACTTTCCGCCTGTGCTACAGGCTGACCCGCAATTTGGTTACTTGATGCACGGTAATCCAGAATTCATATATCCTACATACCTAAAGAATGGTCGCCAAAAGGAAAAACGATATAAGTGCCACAAATGTCCATCGGCTTTTGAAAAGCGAGAGCAGTATAAAATTCATTTATCTTTACATGGCTCTAAACAGAGGTATAAGTGCGAACTGTGCGATTACTCTGTAAAGTACTATGCTAACTATGTTCAGCACATGAGGAAACATCAAATGAACGATGACGCCCTAGCTGAACGGAAGAAAGGAAGTCCGGATTTCCCTGGGACGGAAACTCAAGAAGAGAAACACGAGGAAAGTAGTGATCATATAAAATTAGCTATTAAAACCATGCCTAAAGGAACAGCGAAAAGTGATTTCCAACAATTTTCGATAAGTGATCAACAGACTTTACGTTTACTGCAGCGTAGACGTTCACTAACATCTGGAAAAGAAACAAATGCATCAGAACAGACTGTAGGTAAAGACCGTAAAATGCATATGTGCCTACTTTGCCCGTATACAAACCAACGGTTAGATGCATTGAGCAATCACTACAGGAGACACGAAGAGGCGGATTCGCTCACTAATATGAACAATAAATGCTCCTTCTGTGACCTCATAGTGGTCCAGTCTCACTTTTTGCGTGAGCATCTAAAGACTCATTTTAATTATCAGAAATCTCTCACACCCGAATGCTATGTGGCCAATGAAGAGGTCACATTCACAATTACCGATGTGGATGAAGATACCGGGTGCACTGATCTCAAATTGGACACCGTCGATGATTACACGTGCAATGAAAATAAAATATATGTAAAAATAAGAACTGGAGAACTAGTGGTGGAATAG
Protein Sequence
MGLQYVDREMLNCNSDSNDTSASDVAAKKDDLAQDTSSRQSPTAALDDGKSQKQARKIPRPPPPLIPICASTPTQNKQSGEPPHKKFKETPSESTPDTNCTKKFENLPDISLIPVHNVPSKEPVVRKKNESFFDKLKERILTETGAEGSLKCKICGFESKCLSEHSVHEKNCSPLTSRLPSNTSLPSLGSTRCQNCRHRCKSSADLYVHMKTCKKKETVPDPPADVKVDNQNVASSSHEKEAEPHPMENVVFVWNNINPDMNNFDMPLDISINDDSTLPDYQRSYDSEIIDDNDGMNLSPSQAAGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPIMNENGENEFHYIDPNTAVDAAMEIDESINEGSDNANSVYEIQPLDLQTYDDIKFDDLENRNEDSKKPKKTLWKCKKCNYKDPSKEALLEHVREHSKTDGNHDDAKKKQESTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKTKETMPSPSAVVLAVNDMTDSCSKCPFKTNDKKLMFAHMQQHQPSPQSIFKCYFCPYFVKDEHELLQHLKLHGINDPEDYLAKVAGKSPQHDPQAAVASTSSSVPTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIFTNKIDKEIEDASTSHAAKVEAKEEYPALLDEVPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCFVFEKSELAVYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEEDVPDEEQIAKLRKVIESEKANAVEELPKEGGAKETKEIRVLYFCQKCPATFFSDNELRHHDKFHDLLFDRKCKSCEFSVPDYNELKAHIYYHSDEYHTKTKMLKFMHSSHPGHKEPRLELVHCTTTSEITWVVSSPGKNFDDVYKRPNDSKHTPKQYCCKECPAKFFKSSALTTHMVLHGGEGEHKCKKCSYAVKNVGNLAKHEMLHEIENKSCDYESGDDMDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDDALAERKKGSPDFPGTETQEEKHEESSDHIKLAIKTMPKGTAKSDFQQFSISDQQTLRLLQRRRSLTSGKETNASEQTVGKDRKMHMCLLCPYTNQRLDALSNHYRRHEEADSLTNMNNKCSFCDLIVVQSHFLREHLKTHFNYQKSLTPECYVANEEVTFTITDVDEDTGCTDLKLDTVDDYTCNENKIYVKIRTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00209411;
90% Identity
iTF_00209411;
80% Identity
-