Basic Information

Insect: Blastobasis lacticolella
Gene Symbol: ZNF34
Assembly: GCA_905147135.1
Location: LR990055.1:8189528-8202823[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 4.5 4.1e+02 2.8 0.4 2 20 7 26 6 28 0.85

2 13 1.8 1.6e+02 4.1 0.1 2 20 34 52 33 54 0.92

3 13 0.2 18 7.0 0.3 1 12 216 227 216 236 0.90

4 13 0.0012 0.11 14.1 3.1 1 23 398 420 398 420 0.98

5 13 2.3e-05 0.0021 19.4 1.4 1 23 437 459 437 459 0.98

6 13 1.5 1.4e+02 4.3 0.4 1 12 484 494 484 505 0.69

7 13 6e-06 0.00054 21.3 0.7 1 23 511 533 511 533 0.98

8 13 0.00032 0.029 15.8 2.0 1 23 549 571 549 571 0.98

9 13 1.7e-06 0.00015 23.0 4.5 1 23 577 599 577 599 0.98

10 13 0.0044 0.4 12.2 7.5 1 23 605 627 605 627 0.98

11 13 2.3e-06 0.00021 22.6 0.4 1 23 633 655 633 655 0.98

12 13 0.00073 0.067 14.7 0.6 1 23 659 681 659 681 0.97

13 13 0.00039 0.035 15.6 0.1 1 23 689 712 689 712 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	4.5	4.1e+02	2.8	0.4	2	20	7	26	6	28	0.85
2	13	1.8	1.6e+02	4.1	0.1	2	20	34	52	33	54	0.92
3	13	0.2	18	7.0	0.3	1	12	216	227	216	236	0.90
4	13	0.0012	0.11	14.1	3.1	1	23	398	420	398	420	0.98
5	13	2.3e-05	0.0021	19.4	1.4	1	23	437	459	437	459	0.98
6	13	1.5	1.4e+02	4.3	0.4	1	12	484	494	484	505	0.69
7	13	6e-06	0.00054	21.3	0.7	1	23	511	533	511	533	0.98
8	13	0.00032	0.029	15.8	2.0	1	23	549	571	549	571	0.98
9	13	1.7e-06	0.00015	23.0	4.5	1	23	577	599	577	599	0.98
10	13	0.0044	0.4	12.2	7.5	1	23	605	627	605	627	0.98
11	13	2.3e-06	0.00021	22.6	0.4	1	23	633	655	633	655	0.98
12	13	0.00073	0.067	14.7	0.6	1	23	659	681	659	681	0.97
13	13	0.00039	0.035	15.6	0.1	1	23	689	712	689	712	0.95

Sequence Information

Coding Sequence: ATGGGTGATGTCTCACTGAAATGCCCCTTCTGCTGCGACAAACTATTCAACAGTAAAGAGGAAATTATTGAACATTTGGCAAATATATTAGGAAATATAACATGTCCaatttgcaaaaataaatgGTCTTCTTTGAACCAACTTATTCAGCATTTATCCTTAGATGACTGCCAATCACAAGTTCCAACGGAAACTATTACTTTTGACATAGGTCCTGAAAGCTCAATCAATGATTTAAATTCTGAAGATTCAAATCTTGTTCAGTTACCAGAACCCAAAATTTTAGCTAGCGATGATATAAGCAATGTAAAAACCTCGGAGACTTTCCCACCTATTGAAAGTAATGAGGTTGGTGTTGATGGCTCTGATATTGGTAAAATGTATGTAGAGCTGTTAGGCAAGCAGTTAGCAAAGCCTTGCCTCCAGACTCAAGAGTTGAAATTGGTAAAAGATAATGGAGTGAGTCGCTATGTCTTCATGGTAAACGATGATTCAAATATGAGCTTGAATAACACAGTAGTCACTAAACAAAATCATGATGGTACCATATCTATGACAACAGTAAAAGaccTAAAAATGGAATCTGATACTGATACTGTCATAACTCAAGAGAATGACTTAACGCAAGATAACGAAGAAGAGATATACAGTTGTAATACATGTGGTGTATCATTTACATCTGTCATTGAACATATACAAAACTACCACAATGATCAGGATGTTGTTGTTGAGGAGCCCCTTGAAGATACAGTTAATAATGTAGTCTCTCAGGAGGAAGCACCGCTGGAAAATATGCTGTCTGATCAAATAGCCATGGACAAGCAGACAATGCGCCGCATGATTACTGACACCGGAAACATTGTAGAAGAACCCACTGCTGATTCTATATCTAAAGAATTAGTTGTTGTGACTGATACCAACAAGGATCAATTGGCAATTTCAAAGGAAGAAACAGACAAGATTGAACCTACACATAAGCGGAAGCGGAATGtacagataaataaattttgtgacAGTGTTGTCAAAGATATTAACCCGACTAAAGATAAAAACAATCCATACCACAAGGTGGTGGTGAAAGAGATGCGTACATATGAAGGAGAGACCGTCCGAGTATATAATTGCATGGTATGCCACGTGTATGTCACTAGCTTAGATGACTTCAAATCACAGCCATGCAGGCAGTTGAAGTATTCATGCACGCGGTGCTCGGAGTCGTATCACAGTTCTAAGTCGCTTTACGCACATATGAAAGTTCACAAACAAAAGATTGAGACAGACCCCGCGGCGCTGATGGTGCCCGTCACGTTCGAGTGCGAGGTCTGCTCCACCGTGTTCAACACCAACAAATCGCTCAAACTGCACAAGCGGATGCACGACCCTATCAAAGCCCGCCCAATCGAGCCGCCAGTGGAGACCGCCGAAGGCACCGAAGTGAGCCTGGACAGGTTCCAGTGCTCGGTCTGCGACAAAATGATACCAATGGACTACAAAACAATTCACCAGAACTCCCATAAGAACACGTCGATGTACAACTGTGATATATGCAACAAGAAGTTCCAGTCCAGCGAATACCTAGAGATGCATATGAATGTGCATTCTGCTGATAAGGTAACAGTGAACAAGCAAGACAAGTCGTTGCCGTACACCTGTCTCTACTGCGATCGGAGATTTGCGCGACCCCACGAGAAAGTGAAACACGAGCGGATACATACGGGCGAGAAGCCGCACTCGTGCGAGATCTGCGGCAAGTCGTTCCGCGTCTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCAAGGCCCTACTCCTGCCAGCACTGCGGGAAGAGGTTCAAAGCCCACAGCGTGTACAACCACCACCTGCTGACCCATTCGGATGTTCGCGCGTACAAATGCCCGTACTGCCCCAAAGCGTTCAAGACCTCTGTACAGCTCGCCGGGCATAAGAACTCGCACACCAAGCCGTTCGCCTGCCAGCATTGTAATCGGCCATTCGCCTCGCTCTACGCCGTCCGCGTGCACACGGAGACGCACGCGCGCCAGAACAACCTGAAATTCGCGTGCACCCTCTGCGGAGCCTCCTACGCACGTGCCTTCGCACTCAAGGACCACATCAAACAGGTGCATCAGCAGAACGTCATCGATGAGAAGGAGCTGGTCACTGTGCCGGTCACCTATGATGTTGTTGGCTGA
Protein Sequence: MGDVSLKCPFCCDKLFNSKEEIIEHLANILGNITCPICKNKWSSLNQLIQHLSLDDCQSQVPTETITFDIGPESSINDLNSEDSNLVQLPEPKILASDDISNVKTSETFPPIESNEVGVDGSDIGKMYVELLGKQLAKPCLQTQELKLVKDNGVSRYVFMVNDDSNMSLNNTVVTKQNHDGTISMTTVKDLKMESDTDTVITQENDLTQDNEEEIYSCNTCGVSFTSVIEHIQNYHNDQDVVVEEPLEDTVNNVVSQEEAPLENMLSDQIAMDKQTMRRMITDTGNIVEEPTADSISKELVVVTDTNKDQLAISKEETDKIEPTHKRKRNVQINKFCDSVVKDINPTKDKNNPYHKVVVKEMRTYEGETVRVYNCMVCHVYVTSLDDFKSQPCRQLKYSCTRCSESYHSSKSLYAHMKVHKQKIETDPAALMVPVTFECEVCSTVFNTNKSLKLHKRMHDPIKARPIEPPVETAEGTEVSLDRFQCSVCDKMIPMDYKTIHQNSHKNTSMYNCDICNKKFQSSEYLEMHMNVHSADKVTVNKQDKSLPYTCLYCDRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYSCQHCGKRFKAHSVYNHHLLTHSDVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFACQHCNRPFASLYAVRVHTETHARQNNLKFACTLCGASYARAFALKDHIKQVHQQNVIDEKELVTVPVTYDVVG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00208160;
90% Identity: iTF_00208160;
80% Identity: -